RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 FGD4Q96M96 766 aa13.69□□□□□ -0.22
RABGGTA-216ENST00000560243 KRT23Q9C075 422 aa13.69□□□□□ -0.22
RABGGTA-216ENST00000560243 CPVLQ9H3G5 476 aa13.69□□□□□ -0.22
RABGGTA-216ENST00000560243 SLC5A4Q9NY91 659 aa13.69□□□□□ -0.22
RABGGTA-216ENST00000560243 DDX20Q9UHI6 824 aaKnown RBP13.69□□□□□ -0.22
RABGGTA-216ENST00000560243 U3KPZ7 1027 aaPredicted RBP13.69□□□□□ -0.22
RABGGTA-216ENST00000560243 TNKSO95271 1327 aa13.68□□□□□ -0.22
RABGGTA-216ENST00000560243 H0YGN5 161 aa13.68□□□□□ -0.22
RABGGTA-216ENST00000560243 FDX1P10109 184 aa13.68□□□□□ -0.22
RABGGTA-216ENST00000560243 ALAS1P13196 640 aa13.68□□□□□ -0.22
RABGGTA-216ENST00000560243 BMP2KLQ5H9B9 411 aa13.68□□□□□ -0.22
RABGGTA-216ENST00000560243 MUM1L1Q5H9M0 696 aa13.68□□□□□ -0.22
RABGGTA-216ENST00000560243 ANKLE1Q8NAG6 615 aa13.68□□□□□ -0.22
RABGGTA-216ENST00000560243 PNMA1Q8ND90 353 aa13.68□□□□□ -0.22
RABGGTA-216ENST00000560243 CHST13Q8NET6 341 aa13.68□□□□□ -0.22
RABGGTA-216ENST00000560243 DPF3Q92784 378 aa13.68□□□□□ -0.22
RABGGTA-216ENST00000560243 MAP4K1Q92918 833 aa13.68□□□□□ -0.22
RABGGTA-216ENST00000560243 TINF2Q9BSI4 451 aa13.68□□□□□ -0.22
RABGGTA-216ENST00000560243 ESYT1Q9BSJ8 1104 aa13.68□□□□□ -0.22
RABGGTA-216ENST00000560243 RANBP17Q9H2T7 1088 aaKnown RBP13.68□□□□□ -0.22
RABGGTA-216ENST00000560243 CNNM2Q9H8M5 875 aa13.68□□□□□ -0.22
RABGGTA-216ENST00000560243 RNF146Q9NTX7 359 aa13.68□□□□□ -0.22
RABGGTA-216ENST00000560243 DIS3Q9Y2L1 958 aaKnown RBP13.68□□□□□ -0.22
RABGGTA-216ENST00000560243 RBM8AQ9Y5S9 174 aaKnown RBP13.68□□□□□ -0.22
RABGGTA-216ENST00000560243 RANBP2P49792 3224 aaKnown RBP13.68□□□□□ -0.22
RABGGTA-216ENST00000560243 E7EWF7 191 aa13.67□□□□□ -0.22
RABGGTA-216ENST00000560243 CNTN2Q02246 1040 aa13.67□□□□□ -0.22
RABGGTA-216ENST00000560243 COL9A3Q14050 684 aaPredicted RBP13.67□□□□□ -0.22
RABGGTA-216ENST00000560243 SEC23AQ15436 765 aa13.67□□□□□ -0.22
RABGGTA-216ENST00000560243 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.67□□□□□ -0.22
RABGGTA-216ENST00000560243 NECAB2Q7Z6G3 386 aa13.67□□□□□ -0.22
RABGGTA-216ENST00000560243 ANKRD35Q8N283 1001 aa13.67□□□□□ -0.22
RABGGTA-216ENST00000560243 TRERF1Q96PN7 1200 aa13.67□□□□□ -0.22
RABGGTA-216ENST00000560243 UBA5Q9GZZ9 404 aa13.67□□□□□ -0.22
RABGGTA-216ENST00000560243 LSG1Q9H089 658 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-216ENST00000560243 KAT14Q9H8E8 782 aa13.67□□□□□ -0.22
RABGGTA-216ENST00000560243 A1CFQ9NQ94 594 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-216ENST00000560243 FBXO40Q9UH90 709 aa13.67□□□□□ -0.22
RABGGTA-216ENST00000560243 CCPG1Q9ULG6 757 aa13.67□□□□□ -0.22
RABGGTA-216ENST00000560243 DDX49Q9Y6V7 483 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-216ENST00000560243 PFASO15067 1338 aa13.66□□□□□ -0.22
RABGGTA-216ENST00000560243 LCTP09848 1927 aa13.66□□□□□ -0.22
RABGGTA-216ENST00000560243 SEPT4O43236 478 aa13.66□□□□□ -0.22
RABGGTA-216ENST00000560243 SNAI1O95863 264 aaPredicted RBP13.66□□□□□ -0.22
RABGGTA-216ENST00000560243 ICAM1P05362 532 aa13.66□□□□□ -0.22
RABGGTA-216ENST00000560243 CAPN2P17655 700 aa13.66□□□□□ -0.22
RABGGTA-216ENST00000560243 NT5C2P49902 561 aa13.66□□□□□ -0.22
RABGGTA-216ENST00000560243 CCDC178Q5BJE1 867 aa13.66□□□□□ -0.22
RABGGTA-216ENST00000560243 CHST3Q7LGC8 479 aa13.66□□□□□ -0.22
RABGGTA-216ENST00000560243 LENG1Q96BZ8 264 aaPredicted RBP13.66□□□□□ -0.22
RABGGTA-216ENST00000560243 UBAC1Q9BSL1 405 aa13.66□□□□□ -0.22
RABGGTA-216ENST00000560243 HTATIP2Q9BUP3 242 aa13.66□□□□□ -0.22
RABGGTA-216ENST00000560243 ACAD9Q9H845 621 aa13.66□□□□□ -0.22
RABGGTA-216ENST00000560243 SENP2Q9HC62 589 aa13.66□□□□□ -0.22
RABGGTA-216ENST00000560243 ASTN1O14525 1302 aa13.65□□□□□ -0.22
RABGGTA-216ENST00000560243 TRIOBPQ9H2D6 2365 aa13.65□□□□□ -0.22
RABGGTA-216ENST00000560243 SOWAHBA6NEL2 793 aa13.65□□□□□ -0.22
RABGGTA-216ENST00000560243 ZNF865P0CJ78 1059 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-216ENST00000560243 COL6A1P12109 1028 aa13.65□□□□□ -0.22
RABGGTA-216ENST00000560243 TKFCQ3LXA3 575 aa13.65□□□□□ -0.22
RABGGTA-216ENST00000560243 FAM133AQ8N9E0 248 aa13.65□□□□□ -0.22
RABGGTA-216ENST00000560243 PURBQ96QR8 312 aaKnown RBP13.65□□□□□ -0.22
RABGGTA-216ENST00000560243 C11orf49Q9H6J7 331 aa13.65□□□□□ -0.22
RABGGTA-216ENST00000560243 POTEB2H3BUK9 544 aa13.64□□□□□ -0.23
RABGGTA-216ENST00000560243 NFIBO00712 420 aa13.64□□□□□ -0.23
RABGGTA-216ENST00000560243 MSCO60682 206 aa13.64□□□□□ -0.23
RABGGTA-216ENST00000560243 ANTXR2P58335 489 aa13.64□□□□□ -0.23
RABGGTA-216ENST00000560243 TRDNQ13061 729 aa13.64□□□□□ -0.23
RABGGTA-216ENST00000560243 GPATCH4Q5T3I0 446 aaKnown RBP13.64□□□□□ -0.23
RABGGTA-216ENST00000560243 GJC2Q5T442 439 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-216ENST00000560243 IFIT1BQ5T764 474 aaKnown RBP13.64□□□□□ -0.23
RABGGTA-216ENST00000560243 MAMDC4Q6UXC1 1216 aa13.64□□□□□ -0.23
RABGGTA-216ENST00000560243 KIAA1211Q6ZU35 1233 aa13.64□□□□□ -0.23
RABGGTA-216ENST00000560243 ZNF467Q7Z7K2 595 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-216ENST00000560243 ANO2Q9NQ90 1003 aa13.64□□□□□ -0.23
RABGGTA-216ENST00000560243 GPHNQ9NQX3 736 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-216ENST00000560243 CYP39A1Q9NYL5 469 aa13.64□□□□□ -0.23
RABGGTA-216ENST00000560243 PCDH10Q9P2E7 1040 aa13.64□□□□□ -0.23
RABGGTA-216ENST00000560243 SYNGAP1Q96PV0 1343 aa13.64□□□□□ -0.23
RABGGTA-216ENST00000560243 IFIT3O14879 490 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-216ENST00000560243 SLC27A2O14975 620 aa13.63□□□□□ -0.23
RABGGTA-216ENST00000560243 EVI5O60447 810 aa13.63□□□□□ -0.23
RABGGTA-216ENST00000560243 MYCNP04198 464 aaPredicted RBP13.63□□□□□ -0.23
RABGGTA-216ENST00000560243 NEFLP07196 543 aa13.63□□□□□ -0.23
RABGGTA-216ENST00000560243 NSMFQ6X4W1 530 aa13.63□□□□□ -0.23
RABGGTA-216ENST00000560243 RALYLQ86SE5 291 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-216ENST00000560243 MB21D2Q8IYB1 491 aaPredicted RBP13.63□□□□□ -0.23
RABGGTA-216ENST00000560243 ADGRF4Q8IZF3 695 aa13.63□□□□□ -0.23
RABGGTA-216ENST00000560243 STAG2Q8N3U4 1231 aa13.63□□□□□ -0.23
RABGGTA-216ENST00000560243 NCOA7Q8NI08 942 aa13.63□□□□□ -0.23
RABGGTA-216ENST00000560243 CLEC4DQ8WXI8 215 aa13.63□□□□□ -0.23
RABGGTA-216ENST00000560243 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.63□□□□□ -0.23
RABGGTA-216ENST00000560243 NRBP1Q9UHY1 535 aa13.63□□□□□ -0.23
RABGGTA-216ENST00000560243 CNPY2Q9Y2B0 182 aa13.63□□□□□ -0.23
RABGGTA-216ENST00000560243 BAZ2BQ9UIF8 2168 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-216ENST00000560243 MYH6P13533 1939 aa13.62□□□□□ -0.23
RABGGTA-216ENST00000560243 ADCY6O43306 1168 aa13.62□□□□□ -0.23
RABGGTA-216ENST00000560243 PGK1P00558 417 aa13.62□□□□□ -0.23
RABGGTA-216ENST00000560243 PARP1P09874 1014 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-216ENST00000560243 BAATQ14032 418 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms