RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 TAL1P17542 331 aaPredicted RBP10.56□□□□□ -0.72
HMG20A-209ENST00000559728 PDIA3P30101 505 aaKnown RBP10.56□□□□□ -0.72
HMG20A-209ENST00000559728 CDC27P30260 824 aa10.56□□□□□ -0.72
HMG20A-209ENST00000559728 STAT2P52630 851 aa10.56□□□□□ -0.72
HMG20A-209ENST00000559728 ST3GAL1Q11201 340 aa10.56□□□□□ -0.72
HMG20A-209ENST00000559728 FAM110CQ1W6H9 321 aa10.56□□□□□ -0.72
HMG20A-209ENST00000559728 CCDC96Q2M329 555 aa10.56□□□□□ -0.72
HMG20A-209ENST00000559728 ASPRV1Q53RT3 343 aa10.56□□□□□ -0.72
HMG20A-209ENST00000559728 GPATCH4Q5T3I0 446 aaKnown RBP10.56□□□□□ -0.72
HMG20A-209ENST00000559728 CATIPQ7Z7H3 387 aa10.56□□□□□ -0.72
HMG20A-209ENST00000559728 FAM160B2Q86V87 743 aa10.56□□□□□ -0.72
HMG20A-209ENST00000559728 SRBD1Q8N5C6 995 aaKnown RBP10.56□□□□□ -0.72
HMG20A-209ENST00000559728 ANKRD13CQ8N6S4 541 aa10.56□□□□□ -0.72
HMG20A-209ENST00000559728 PRPF38AQ8NAV1 312 aaKnown RBP10.56□□□□□ -0.72
HMG20A-209ENST00000559728 FANCBQ8NB91 859 aa10.56□□□□□ -0.72
HMG20A-209ENST00000559728 FBXO22Q8NEZ5 403 aa10.56□□□□□ -0.72
HMG20A-209ENST00000559728 ARHGAP39Q9C0H5 1083 aa10.56□□□□□ -0.72
HMG20A-209ENST00000559728 SLC38A10Q9HBR0 1119 aa10.56□□□□□ -0.72
HMG20A-209ENST00000559728 HOXC10Q9NYD6 342 aa10.56□□□□□ -0.72
HMG20A-209ENST00000559728 RABGAP1Q9Y3P9 1069 aa10.56□□□□□ -0.72
HMG20A-209ENST00000559728 CCDC69A6NI79 296 aa10.55□□□□□ -0.72
HMG20A-209ENST00000559728 KLRF2D3W0D1 207 aa10.55□□□□□ -0.72
HMG20A-209ENST00000559728 ATP2A1O14983 1001 aa10.55□□□□□ -0.72
HMG20A-209ENST00000559728 PPP1R11O60927 126 aaPredicted RBP10.55□□□□□ -0.72
HMG20A-209ENST00000559728 PARP1P09874 1014 aaKnown RBP10.55□□□□□ -0.72
HMG20A-209ENST00000559728 GCLCP48506 637 aaPredicted RBP10.55□□□□□ -0.72
HMG20A-209ENST00000559728 NEK4P51957 841 aa10.55□□□□□ -0.72
HMG20A-209ENST00000559728 RCAN1P53805 252 aa10.55□□□□□ -0.72
HMG20A-209ENST00000559728 ERVK-9P63128 1117 aa10.55□□□□□ -0.72
HMG20A-209ENST00000559728 ERVK-24P63145 666 aa10.55□□□□□ -0.72
HMG20A-209ENST00000559728 SYDE2Q5VT97 1194 aa10.55□□□□□ -0.72
HMG20A-209ENST00000559728 NFXL1Q6ZNB6 911 aa10.55□□□□□ -0.72
HMG20A-209ENST00000559728 TMTC3Q6ZXV5 915 aa10.55□□□□□ -0.72
HMG20A-209ENST00000559728 CCDC144CPQ8IYA2 1237 aa10.55□□□□□ -0.72
HMG20A-209ENST00000559728 ADGRF4Q8IZF3 695 aa10.55□□□□□ -0.72
HMG20A-209ENST00000559728 CMTR1Q8N1G2 835 aaKnown RBP10.55□□□□□ -0.72
HMG20A-209ENST00000559728 PDCD7Q8N8D1 485 aaKnown RBP10.55□□□□□ -0.72
HMG20A-209ENST00000559728 SMCR8Q8TEV9 937 aaPredicted RBP10.55□□□□□ -0.72
HMG20A-209ENST00000559728 ZNF296Q8WUU4 475 aaPredicted RBP10.55□□□□□ -0.72
HMG20A-209ENST00000559728 KIFC2Q96AC6 838 aa10.55□□□□□ -0.72
HMG20A-209ENST00000559728 MOV10L1Q9BXT6 1211 aaKnown RBP10.55□□□□□ -0.72
HMG20A-209ENST00000559728 PORCNQ9H237 461 aa10.55□□□□□ -0.72
HMG20A-209ENST00000559728 RANBP17Q9H2T7 1088 aaKnown RBP10.55□□□□□ -0.72
HMG20A-209ENST00000559728 RIOX1Q9H6W3 641 aa10.55□□□□□ -0.72
HMG20A-209ENST00000559728 JMJD4Q9H9V9 463 aa10.55□□□□□ -0.72
HMG20A-209ENST00000559728 RIPK3Q9Y572 518 aa10.55□□□□□ -0.72
HMG20A-209ENST00000559728 SLC12A7Q9Y666 1083 aa10.55□□□□□ -0.72
HMG20A-209ENST00000559728 A0A0G2JMZ2 1700 aa10.55□□□□□ -0.72
HMG20A-209ENST00000559728 ZBTB43O43298 467 aa10.54□□□□□ -0.72
HMG20A-209ENST00000559728 ADD1P35611 737 aaKnown RBP10.54□□□□□ -0.72
HMG20A-209ENST00000559728 NTRK3Q16288 839 aa10.54□□□□□ -0.72
HMG20A-209ENST00000559728 MICU3Q86XE3 530 aa10.54□□□□□ -0.72
HMG20A-209ENST00000559728 GPRC5AQ8NFJ5 357 aa10.54□□□□□ -0.72
HMG20A-209ENST00000559728 GTF3C2Q8WUA4 911 aaPredicted RBP10.54□□□□□ -0.72
HMG20A-209ENST00000559728 CHURC1Q8WUH1 139 aa10.54□□□□□ -0.72
HMG20A-209ENST00000559728 NUP133Q8WUM0 1156 aa10.54□□□□□ -0.72
HMG20A-209ENST00000559728 ZNF274Q96GC6 653 aaPredicted RBP10.54□□□□□ -0.72
HMG20A-209ENST00000559728 SPATC1LQ9H0A9 340 aa10.54□□□□□ -0.72
HMG20A-209ENST00000559728 EFCC1Q9HA90 598 aa10.54□□□□□ -0.72
HMG20A-209ENST00000559728 RYDENQ9NUL5 291 aaKnown RBP10.54□□□□□ -0.72
HMG20A-209ENST00000559728 GOLGA8BA8MQT2 603 aa10.53□□□□□ -0.72
HMG20A-209ENST00000559728 CALM1P0DP23 149 aa10.53□□□□□ -0.72
HMG20A-209ENST00000559728 CALM2P0DP24 149 aa10.53□□□□□ -0.72
HMG20A-209ENST00000559728 CALM3P0DP25 149 aa10.53□□□□□ -0.72
HMG20A-209ENST00000559728 SMARCA1P28370 1054 aa10.53□□□□□ -0.72
HMG20A-209ENST00000559728 LBX1P52954 281 aa10.53□□□□□ -0.72
HMG20A-209ENST00000559728 LACTBP83111 547 aaPredicted RBP10.53□□□□□ -0.72
HMG20A-209ENST00000559728 SP3Q02447 781 aa10.53□□□□□ -0.72
HMG20A-209ENST00000559728 RABEP1Q15276 862 aa10.53□□□□□ -0.72
HMG20A-209ENST00000559728 ME3Q16798 604 aa10.53□□□□□ -0.72
HMG20A-209ENST00000559728 MB21D1Q8N884 522 aa10.53□□□□□ -0.72
HMG20A-209ENST00000559728 CD99L2Q8TCZ2 262 aa10.53□□□□□ -0.72
HMG20A-209ENST00000559728 TRIM47Q96LD4 638 aa10.53□□□□□ -0.72
HMG20A-209ENST00000559728 AGBL1Q96MI9 1066 aa10.53□□□□□ -0.72
HMG20A-209ENST00000559728 PAGR1Q9BTK6 254 aa10.53□□□□□ -0.72
HMG20A-209ENST00000559728 BEGAINQ9BUH8 593 aa10.53□□□□□ -0.72
HMG20A-209ENST00000559728 SPZ1Q9BXG8 430 aa10.53□□□□□ -0.72
HMG20A-209ENST00000559728 NCOA5Q9HCD5 579 aaKnown RBP10.53□□□□□ -0.72
HMG20A-209ENST00000559728 RAVER2Q9HCJ3 691 aaKnown RBP10.53□□□□□ -0.72
HMG20A-209ENST00000559728 MYH4Q9Y623 1939 aa10.52□□□□□ -0.72
HMG20A-209ENST00000559728 HTTP42858 3142 aa10.52□□□□□ -0.72
HMG20A-209ENST00000559728 GOLGA8AA7E2F4 631 aa10.52□□□□□ -0.73
HMG20A-209ENST00000559728 PFKFB2O60825 505 aa10.52□□□□□ -0.73
HMG20A-209ENST00000559728 DTNBO60941 627 aa10.52□□□□□ -0.73
HMG20A-209ENST00000559728 FKTNO75072 461 aa10.52□□□□□ -0.73
HMG20A-209ENST00000559728 PPP1R37O75864 691 aa10.52□□□□□ -0.73
HMG20A-209ENST00000559728 CTDNEP1O95476 244 aa10.52□□□□□ -0.73
HMG20A-209ENST00000559728 STAT3P40763 770 aa10.52□□□□□ -0.73
HMG20A-209ENST00000559728 CTCFP49711 727 aaPredicted RBP10.52□□□□□ -0.73
HMG20A-209ENST00000559728 OAZ1P54368 228 aa10.52□□□□□ -0.73
HMG20A-209ENST00000559728 SCRN1Q12765 414 aa10.52□□□□□ -0.73
HMG20A-209ENST00000559728 RTN1Q16799 776 aa10.52□□□□□ -0.73
HMG20A-209ENST00000559728 QRICH1Q2TAL8 776 aa10.52□□□□□ -0.73
HMG20A-209ENST00000559728 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.52□□□□□ -0.73
HMG20A-209ENST00000559728 RIOX2Q8IUF8 465 aa10.52□□□□□ -0.73
HMG20A-209ENST00000559728 CTCFLQ8NI51 663 aaPredicted RBP10.52□□□□□ -0.73
HMG20A-209ENST00000559728 SHISA4Q96DD7 197 aa10.52□□□□□ -0.73
HMG20A-209ENST00000559728 PIGSQ96S52 555 aa10.52□□□□□ -0.73
HMG20A-209ENST00000559728 UPF2Q9HAU5 1272 aaKnown RBP10.52□□□□□ -0.73
HMG20A-209ENST00000559728 GJD2Q9UKL4 321 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms