RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 SMCHD1A6NHR9 2005 aa14.79□□□□□ -0.04
LRRC28-214ENST00000559433 ZNF536O15090 1300 aa14.79□□□□□ -0.04
LRRC28-214ENST00000559433 SGSM2O43147 1006 aa14.79□□□□□ -0.04
LRRC28-214ENST00000559433 PDHBP11177 359 aa14.79□□□□□ -0.04
LRRC28-214ENST00000559433 SLC16A2P36021 539 aa14.79□□□□□ -0.04
LRRC28-214ENST00000559433 MNX1P50219 401 aaPredicted RBP14.79□□□□□ -0.04
LRRC28-214ENST00000559433 PTH1RQ03431 593 aa14.79□□□□□ -0.04
LRRC28-214ENST00000559433 PRAMEF19Q5SWL8 479 aa14.79□□□□□ -0.04
LRRC28-214ENST00000559433 TTBK2Q6IQ55 1244 aa14.79□□□□□ -0.04
LRRC28-214ENST00000559433 SKAP1Q86WV1 359 aa14.79□□□□□ -0.04
LRRC28-214ENST00000559433 DGKHQ86XP1 1220 aa14.79□□□□□ -0.04
LRRC28-214ENST00000559433 ANKRD35Q8N283 1001 aa14.79□□□□□ -0.04
LRRC28-214ENST00000559433 AGBL1Q96MI9 1066 aa14.79□□□□□ -0.04
LRRC28-214ENST00000559433 GPCPD1Q9NPB8 672 aa14.79□□□□□ -0.04
LRRC28-214ENST00000559433 TKFCQ3LXA3 575 aa14.78□□□□□ -0.04
LRRC28-214ENST00000559433 SYDE2Q5VT97 1194 aa14.78□□□□□ -0.04
LRRC28-214ENST00000559433 ARRDC4Q8NCT1 418 aa14.78□□□□□ -0.04
LRRC28-214ENST00000559433 ZSCAN10Q96SZ4 725 aaPredicted RBP14.78□□□□□ -0.04
LRRC28-214ENST00000559433 TINF2Q9BSI4 451 aa14.78□□□□□ -0.04
LRRC28-214ENST00000559433 UBAC1Q9BSL1 405 aa14.78□□□□□ -0.04
LRRC28-214ENST00000559433 ACAD9Q9H845 621 aa14.78□□□□□ -0.04
LRRC28-214ENST00000559433 KAT14Q9H8E8 782 aa14.78□□□□□ -0.04
LRRC28-214ENST00000559433 RNF146Q9NTX7 359 aa14.78□□□□□ -0.04
LRRC28-214ENST00000559433 ZSWIM5Q9P217 1185 aa14.78□□□□□ -0.04
LRRC28-214ENST00000559433 MYH6P13533 1939 aa14.78□□□□□ -0.04
LRRC28-214ENST00000559433 TNKSO95271 1327 aa14.77□□□□□ -0.04
LRRC28-214ENST00000559433 DNAJC25-GNG10A0A024R161 153 aa14.77□□□□□ -0.05
LRRC28-214ENST00000559433 SEPT4O43236 478 aa14.77□□□□□ -0.05
LRRC28-214ENST00000559433 ALAS1P13196 640 aa14.77□□□□□ -0.05
LRRC28-214ENST00000559433 ZNF543Q08ER8 600 aa14.77□□□□□ -0.05
LRRC28-214ENST00000559433 HABP4Q5JVS0 413 aaKnown RBP14.77□□□□□ -0.05
LRRC28-214ENST00000559433 BTNL9Q6UXG8 535 aa14.77□□□□□ -0.05
LRRC28-214ENST00000559433 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.77□□□□□ -0.05
LRRC28-214ENST00000559433 ENAHQ8N8S7 591 aaPredicted RBP14.77□□□□□ -0.05
LRRC28-214ENST00000559433 PNMA1Q8ND90 353 aa14.77□□□□□ -0.05
LRRC28-214ENST00000559433 RANBP17Q9H2T7 1088 aaKnown RBP14.77□□□□□ -0.05
LRRC28-214ENST00000559433 NRBP1Q9UHY1 535 aa14.77□□□□□ -0.05
LRRC28-214ENST00000559433 CCPG1Q9ULG6 757 aa14.77□□□□□ -0.05
LRRC28-214ENST00000559433 CNPY2Q9Y2B0 182 aa14.77□□□□□ -0.05
LRRC28-214ENST00000559433 LCTP09848 1927 aa14.76□□□□□ -0.05
LRRC28-214ENST00000559433 CYP21A2P08686 494 aa14.76□□□□□ -0.05
LRRC28-214ENST00000559433 SNHG28P0DPA3 235 aa14.76□□□□□ -0.05
LRRC28-214ENST00000559433 TRDNQ13061 729 aa14.76□□□□□ -0.05
LRRC28-214ENST00000559433 ANO1Q5XXA6 986 aa14.76□□□□□ -0.05
LRRC28-214ENST00000559433 CHRDL2Q6WN34 429 aa14.76□□□□□ -0.05
LRRC28-214ENST00000559433 MSL3Q8N5Y2 521 aaKnown RBP14.76□□□□□ -0.05
LRRC28-214ENST00000559433 CCDC136Q96JN2 1154 aa14.76□□□□□ -0.05
LRRC28-214ENST00000559433 TRERF1Q96PN7 1200 aa14.76□□□□□ -0.05
LRRC28-214ENST00000559433 SENP6Q9GZR1 1112 aaPredicted RBP14.76□□□□□ -0.05
LRRC28-214ENST00000559433 COLQQ9Y215 455 aaPredicted RBP14.76□□□□□ -0.05
LRRC28-214ENST00000559433 PFASO15067 1338 aa14.75□□□□□ -0.05
LRRC28-214ENST00000559433 SYNGAP1Q96PV0 1343 aa14.75□□□□□ -0.05
LRRC28-214ENST00000559433 KBTBD13C9JR72 458 aa14.75□□□□□ -0.05
LRRC28-214ENST00000559433 ICAM1P05362 532 aa14.75□□□□□ -0.05
LRRC28-214ENST00000559433 GOLGA8HP0CJ92 632 aa14.75□□□□□ -0.05
LRRC28-214ENST00000559433 COL6A1P12109 1028 aa14.75□□□□□ -0.05
LRRC28-214ENST00000559433 TAL1P17542 331 aaPredicted RBP14.75□□□□□ -0.05
LRRC28-214ENST00000559433 BMP2KLQ5H9B9 411 aa14.75□□□□□ -0.05
LRRC28-214ENST00000559433 GPATCH4Q5T3I0 446 aaKnown RBP14.75□□□□□ -0.05
LRRC28-214ENST00000559433 KIAA1211Q6ZU35 1233 aa14.75□□□□□ -0.05
LRRC28-214ENST00000559433 ZNF467Q7Z7K2 595 aaPredicted RBP14.75□□□□□ -0.05
LRRC28-214ENST00000559433 C7orf61Q8IZ16 206 aa14.75□□□□□ -0.05
LRRC28-214ENST00000559433 ANKS1AQ92625 1134 aa14.75□□□□□ -0.05
LRRC28-214ENST00000559433 A1CFQ9NQ94 594 aaKnown RBP14.75□□□□□ -0.05
LRRC28-214ENST00000559433 LRRC37A2A6NM11 1700 aa14.75□□□□□ -0.05
LRRC28-214ENST00000559433 POTEB2H3BUK9 544 aa14.74□□□□□ -0.05
LRRC28-214ENST00000559433 DNM1LO00429 736 aa14.74□□□□□ -0.05
LRRC28-214ENST00000559433 NEFLP07196 543 aa14.74□□□□□ -0.05
LRRC28-214ENST00000559433 MUM1L1Q5H9M0 696 aa14.74□□□□□ -0.05
LRRC28-214ENST00000559433 IFIT1BQ5T764 474 aaKnown RBP14.74□□□□□ -0.05
LRRC28-214ENST00000559433 MAMDC4Q6UXC1 1216 aa14.74□□□□□ -0.05
LRRC28-214ENST00000559433 CYB5R4Q7L1T6 521 aa14.74□□□□□ -0.05
LRRC28-214ENST00000559433 RALYLQ86SE5 291 aaKnown RBP14.74□□□□□ -0.05
LRRC28-214ENST00000559433 FGD4Q96M96 766 aa14.74□□□□□ -0.05
LRRC28-214ENST00000559433 ESYT1Q9BSJ8 1104 aa14.74□□□□□ -0.05
LRRC28-214ENST00000559433 RBM8AQ9Y5S9 174 aaKnown RBP14.74□□□□□ -0.05
LRRC28-214ENST00000559433 E7EWF7 191 aa14.73□□□□□ -0.05
LRRC28-214ENST00000559433 ZNF865P0CJ78 1059 aaPredicted RBP14.73□□□□□ -0.05
LRRC28-214ENST00000559433 RARBP10826 455 aa14.73□□□□□ -0.05
LRRC28-214ENST00000559433 AKR1A1P14550 325 aa14.73□□□□□ -0.05
LRRC28-214ENST00000559433 CNTN2Q02246 1040 aa14.73□□□□□ -0.05
LRRC28-214ENST00000559433 ASPRV1Q53RT3 343 aa14.73□□□□□ -0.05
LRRC28-214ENST00000559433 GJC2Q5T442 439 aaPredicted RBP14.73□□□□□ -0.05
LRRC28-214ENST00000559433 NSMFQ6X4W1 530 aa14.73□□□□□ -0.05
LRRC28-214ENST00000559433 MAP4K1Q92918 833 aa14.73□□□□□ -0.05
LRRC28-214ENST00000559433 ZHX1Q9UKY1 873 aaPredicted RBP14.73□□□□□ -0.05
LRRC28-214ENST00000559433 TAF6LQ9Y6J9 622 aa14.73□□□□□ -0.05
LRRC28-214ENST00000559433 SNAI1O95863 264 aaPredicted RBP14.72□□□□□ -0.05
LRRC28-214ENST00000559433 PARP1P09874 1014 aaKnown RBP14.72□□□□□ -0.05
LRRC28-214ENST00000559433 SEC23AQ15436 765 aa14.72□□□□□ -0.05
LRRC28-214ENST00000559433 STOX1Q6ZVD7 989 aa14.72□□□□□ -0.05
LRRC28-214ENST00000559433 ARMCX2Q7L311 632 aa14.72□□□□□ -0.05
LRRC28-214ENST00000559433 RNF180Q86T96 592 aa14.72□□□□□ -0.05
LRRC28-214ENST00000559433 FAM133AQ8N9E0 248 aa14.72□□□□□ -0.05
LRRC28-214ENST00000559433 NCOA7Q8NI08 942 aa14.72□□□□□ -0.05
LRRC28-214ENST00000559433 UBA5Q9GZZ9 404 aa14.72□□□□□ -0.05
LRRC28-214ENST00000559433 CPVLQ9H3G5 476 aa14.72□□□□□ -0.05
LRRC28-214ENST00000559433 XPNPEP3Q9NQH7 507 aa14.72□□□□□ -0.05
LRRC28-214ENST00000559433 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.72□□□□□ -0.05
LRRC28-214ENST00000559433 CYP39A1Q9NYL5 469 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms