RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 SEC24BO95487 1268 aa21.87■■□□□ 1.09
CASC4-209ENST00000559222 PARP1P09874 1014 aaKnown RBP21.87■■□□□ 1.09
CASC4-209ENST00000559222 EXOSC10Q01780 885 aaKnown RBP21.87■■□□□ 1.09
CASC4-209ENST00000559222 TROAPQ12815 778 aa21.87■■□□□ 1.09
CASC4-209ENST00000559222 GRM4Q14833 912 aa21.87■■□□□ 1.09
CASC4-209ENST00000559222 ASPRV1Q53RT3 343 aa21.87■■□□□ 1.09
CASC4-209ENST00000559222 MUM1L1Q5H9M0 696 aa21.87■■□□□ 1.09
CASC4-209ENST00000559222 GPATCH4Q5T3I0 446 aaKnown RBP21.87■■□□□ 1.09
CASC4-209ENST00000559222 MMP19Q99542 508 aa21.87■■□□□ 1.09
CASC4-209ENST00000559222 UNC93B1Q9H1C4 597 aa21.87■■□□□ 1.09
CASC4-209ENST00000559222 BIN2Q9UBW5 565 aaPredicted RBP21.87■■□□□ 1.09
CASC4-209ENST00000559222 FRMPD3Q5JV73 1810 aa21.87■■□□□ 1.09
CASC4-209ENST00000559222 RXRAP19793 462 aa21.86■■□□□ 1.09
CASC4-209ENST00000559222 OAZ1P54368 228 aa21.86■■□□□ 1.09
CASC4-209ENST00000559222 SART3Q15020 963 aaKnown RBP21.86■■□□□ 1.09
CASC4-209ENST00000559222 NBPF11Q86T75 865 aa21.86■■□□□ 1.09
CASC4-209ENST00000559222 ZNF654Q8IZM8 581 aa21.86■■□□□ 1.09
CASC4-209ENST00000559222 JAKMIP1Q96N16 626 aaKnown RBP21.86■■□□□ 1.09
CASC4-209ENST00000559222 BAZ2BQ9UIF8 2168 aaKnown RBP21.86■■□□□ 1.09
CASC4-209ENST00000559222 MCM3APO60318 1980 aa21.85■■□□□ 1.09
CASC4-209ENST00000559222 PALM3A6NDB9 673 aaPredicted RBP21.85■■□□□ 1.09
CASC4-209ENST00000559222 FCER1AP12319 257 aa21.85■■□□□ 1.09
CASC4-209ENST00000559222 XRCC5P13010 732 aaKnown RBP21.85■■□□□ 1.09
CASC4-209ENST00000559222 ALAS1P13196 640 aa21.85■■□□□ 1.09
CASC4-209ENST00000559222 CCL5P13501 91 aa21.85■■□□□ 1.09
CASC4-209ENST00000559222 ZKSCAN1P17029 563 aaPredicted RBP21.85■■□□□ 1.09
CASC4-209ENST00000559222 ADGRF4Q8IZF3 695 aa21.85■■□□□ 1.09
CASC4-209ENST00000559222 TMEM87BQ96K49 555 aa21.85■■□□□ 1.09
CASC4-209ENST00000559222 RNF146Q9NTX7 359 aa21.85■■□□□ 1.09
CASC4-209ENST00000559222 CCPG1Q9ULG6 757 aa21.85■■□□□ 1.09
CASC4-209ENST00000559222 BRCA2P51587 3418 aa21.85■■□□□ 1.09
CASC4-209ENST00000559222 HMGCRP04035 888 aa21.84■■□□□ 1.09
CASC4-209ENST00000559222 ICAM1P05362 532 aa21.84■■□□□ 1.09
CASC4-209ENST00000559222 HOXC6P09630 235 aa21.84■■□□□ 1.09
CASC4-209ENST00000559222 FDX1P10109 184 aa21.84■■□□□ 1.09
CASC4-209ENST00000559222 ABRAQ8N0Z2 381 aa21.84■■□□□ 1.09
CASC4-209ENST00000559222 NUP133Q8WUM0 1156 aa21.84■■□□□ 1.09
CASC4-209ENST00000559222 JMJD4Q9H9V9 463 aa21.84■■□□□ 1.09
CASC4-209ENST00000559222 VAT1LQ9HCJ6 419 aa21.84■■□□□ 1.09
CASC4-209ENST00000559222 LRRC37A2A6NM11 1700 aa21.83■■□□□ 1.09
CASC4-209ENST00000559222 KLRF2D3W0D1 207 aa21.83■■□□□ 1.09
CASC4-209ENST00000559222 STRNO43815 780 aa21.83■■□□□ 1.09
CASC4-209ENST00000559222 IGHA2P01877 340 aa21.83■■□□□ 1.09
CASC4-209ENST00000559222 COPB2P35606 906 aa21.83■■□□□ 1.09
CASC4-209ENST00000559222 KRT32Q14532 448 aa21.83■■□□□ 1.09
CASC4-209ENST00000559222 CDC37Q16543 378 aaPredicted RBP21.83■■□□□ 1.09
CASC4-209ENST00000559222 NFXL1Q6ZNB6 911 aa21.83■■□□□ 1.09
CASC4-209ENST00000559222 DHX32Q7L7V1 743 aaKnown RBP21.83■■□□□ 1.09
CASC4-209ENST00000559222 CATIPQ7Z7H3 387 aa21.83■■□□□ 1.09
CASC4-209ENST00000559222 DPP9Q86TI2 863 aa21.83■■□□□ 1.09
CASC4-209ENST00000559222 CCDC144CPQ8IYA2 1237 aa21.83■■□□□ 1.09
CASC4-209ENST00000559222 FGD4Q96M96 766 aa21.83■■□□□ 1.09
CASC4-209ENST00000559222 TRERF1Q96PN7 1200 aa21.83■■□□□ 1.09
CASC4-209ENST00000559222 MTA3Q9BTC8 594 aa21.83■■□□□ 1.09
CASC4-209ENST00000559222 PCDH10Q9P2E7 1040 aa21.83■■□□□ 1.09
CASC4-209ENST00000559222 BRPF3Q9ULD4 1205 aa21.83■■□□□ 1.09
CASC4-209ENST00000559222 CYTH3O43739 400 aa21.82■■□□□ 1.08
CASC4-209ENST00000559222 CYP2C19P33261 490 aa21.82■■□□□ 1.08
CASC4-209ENST00000559222 CACNB2Q08289 660 aaPredicted RBP21.82■■□□□ 1.08
CASC4-209ENST00000559222 KCTD2Q14681 263 aa21.82■■□□□ 1.08
CASC4-209ENST00000559222 QRICH1Q2TAL8 776 aa21.82■■□□□ 1.08
CASC4-209ENST00000559222 ZNF792Q3KQV3 632 aa21.82■■□□□ 1.08
CASC4-209ENST00000559222 C8orf34Q49A92 452 aa21.82■■□□□ 1.08
CASC4-209ENST00000559222 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.82■■□□□ 1.08
CASC4-209ENST00000559222 A1CFQ9NQ94 594 aaKnown RBP21.82■■□□□ 1.08
CASC4-209ENST00000559222 GTF3C3Q9Y5Q9 886 aa21.82■■□□□ 1.08
CASC4-209ENST00000559222 WDR19Q8NEZ3 1342 aa21.81■■□□□ 1.08
CASC4-209ENST00000559222 DNAJC25-GNG10A0A024R161 153 aa21.81■■□□□ 1.08
CASC4-209ENST00000559222 CCDC69A6NI79 296 aa21.81■■□□□ 1.08
CASC4-209ENST00000559222 NFIBO00712 420 aa21.81■■□□□ 1.08
CASC4-209ENST00000559222 PPP1R11O60927 126 aaPredicted RBP21.81■■□□□ 1.08
CASC4-209ENST00000559222 PRKAR2AP13861 404 aaKnown RBP21.81■■□□□ 1.08
CASC4-209ENST00000559222 EN2P19622 333 aaPredicted RBP21.81■■□□□ 1.08
CASC4-209ENST00000559222 LIFRP42702 1097 aa21.81■■□□□ 1.08
CASC4-209ENST00000559222 UBXN2AP68543 259 aa21.81■■□□□ 1.08
CASC4-209ENST00000559222 USH1GQ495M9 461 aa21.81■■□□□ 1.08
CASC4-209ENST00000559222 MAP3K21Q5TCX8 1036 aa21.81■■□□□ 1.08
CASC4-209ENST00000559222 TRPV1Q8NER1 839 aa21.81■■□□□ 1.08
CASC4-209ENST00000559222 CHST13Q8NET6 341 aa21.81■■□□□ 1.08
CASC4-209ENST00000559222 SHISA4Q96DD7 197 aa21.81■■□□□ 1.08
CASC4-209ENST00000559222 MAML3Q96JK9 1138 aa21.81■■□□□ 1.08
CASC4-209ENST00000559222 PURBQ96QR8 312 aaKnown RBP21.81■■□□□ 1.08
CASC4-209ENST00000559222 ACAD9Q9H845 621 aa21.81■■□□□ 1.08
CASC4-209ENST00000559222 DDX49Q9Y6V7 483 aaKnown RBP21.81■■□□□ 1.08
CASC4-209ENST00000559222 KIAA0100Q14667 2235 aaKnown RBP21.81■■□□□ 1.08
CASC4-209ENST00000559222 EPB41L2O43491 1005 aaKnown RBP21.8■■□□□ 1.08
CASC4-209ENST00000559222 DHX16O60231 1041 aaKnown RBP21.8■■□□□ 1.08
CASC4-209ENST00000559222 DDAH1O94760 285 aa21.8■■□□□ 1.08
CASC4-209ENST00000559222 PLEKHA8P1O95397 391 aa21.8■■□□□ 1.08
CASC4-209ENST00000559222 CASTP20810 708 aaKnown RBP21.8■■□□□ 1.08
CASC4-209ENST00000559222 RPS6KB1P23443 525 aa21.8■■□□□ 1.08
CASC4-209ENST00000559222 CCND3P30281 292 aaPredicted RBP21.8■■□□□ 1.08
CASC4-209ENST00000559222 CNTN2Q02246 1040 aa21.8■■□□□ 1.08
CASC4-209ENST00000559222 MLLT1Q03111 559 aaPredicted RBP21.8■■□□□ 1.08
CASC4-209ENST00000559222 SGMS1Q86VZ5 419 aa21.8■■□□□ 1.08
CASC4-209ENST00000559222 CMTR1Q8N1G2 835 aaKnown RBP21.8■■□□□ 1.08
CASC4-209ENST00000559222 CLEC4DQ8WXI8 215 aa21.8■■□□□ 1.08
CASC4-209ENST00000559222 RNF208Q9H0X6 261 aa21.8■■□□□ 1.08
CASC4-209ENST00000559222 ASTN1O14525 1302 aa21.8■■□□□ 1.08
CASC4-209ENST00000559222 APOA5Q6Q788 366 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms