RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 ZHX1Q9UKY1 873 aaPredicted RBP16.08■□□□□ 0.16
VPS18-203ENST00000558855 STX8Q9UNK0 236 aa16.08■□□□□ 0.16
VPS18-203ENST00000558855 A0A1W2PQ45 241 aaPredicted RBP16.07■□□□□ 0.16
VPS18-203ENST00000558855 A0A1W2PQY0 241 aa16.07■□□□□ 0.16
VPS18-203ENST00000558855 SOWAHBA6NEL2 793 aa16.07■□□□□ 0.16
VPS18-203ENST00000558855 ORC4O43929 436 aa16.07■□□□□ 0.16
VPS18-203ENST00000558855 RARBP10826 455 aa16.07■□□□□ 0.16
VPS18-203ENST00000558855 STAT2P52630 851 aa16.07■□□□□ 0.16
VPS18-203ENST00000558855 C9orf50Q5SZB4 431 aa16.07■□□□□ 0.16
VPS18-203ENST00000558855 TMEM63BQ5T3F8 832 aa16.07■□□□□ 0.16
VPS18-203ENST00000558855 CCSAPQ6IQ19 270 aaPredicted RBP16.07■□□□□ 0.16
VPS18-203ENST00000558855 DDX11Q96FC9 970 aa16.07■□□□□ 0.16
VPS18-203ENST00000558855 IL25Q9H293 177 aa16.07■□□□□ 0.16
VPS18-203ENST00000558855 A1CFQ9NQ94 594 aaKnown RBP16.07■□□□□ 0.16
VPS18-203ENST00000558855 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.07■□□□□ 0.16
VPS18-203ENST00000558855 NRBP1Q9UHY1 535 aa16.07■□□□□ 0.16
VPS18-203ENST00000558855 PRR12Q9ULL5 1215 aa16.07■□□□□ 0.16
VPS18-203ENST00000558855 ISY1Q9ULR0 285 aaKnown RBP16.07■□□□□ 0.16
VPS18-203ENST00000558855 SYNGAP1Q96PV0 1343 aa16.07■□□□□ 0.16
VPS18-203ENST00000558855 CCDC171Q6TFL3 1326 aa16.06■□□□□ 0.16
VPS18-203ENST00000558855 CTAGE5O15320 804 aa16.06■□□□□ 0.16
VPS18-203ENST00000558855 RANBP6O60518 1105 aaKnown RBP16.06■□□□□ 0.16
VPS18-203ENST00000558855 AKR1A1P14550 325 aa16.06■□□□□ 0.16
VPS18-203ENST00000558855 SLC16A2P36021 539 aa16.06■□□□□ 0.16
VPS18-203ENST00000558855 SLC1A4P43007 532 aa16.06■□□□□ 0.16
VPS18-203ENST00000558855 TLE2Q04725 743 aa16.06■□□□□ 0.16
VPS18-203ENST00000558855 MCMDC2Q4G0Z9 681 aa16.06■□□□□ 0.16
VPS18-203ENST00000558855 RCSD1Q6JBY9 416 aa16.06■□□□□ 0.16
VPS18-203ENST00000558855 CCDC174Q6PII3 467 aa16.06■□□□□ 0.16
VPS18-203ENST00000558855 FAM133AQ8N9E0 248 aa16.06■□□□□ 0.16
VPS18-203ENST00000558855 KLHDC9Q8NEP7 349 aa16.06■□□□□ 0.16
VPS18-203ENST00000558855 STAG1Q8WVM7 1258 aa16.06■□□□□ 0.16
VPS18-203ENST00000558855 PRDM5Q9NQX1 630 aaPredicted RBP16.06■□□□□ 0.16
VPS18-203ENST00000558855 RNF146Q9NTX7 359 aa16.06■□□□□ 0.16
VPS18-203ENST00000558855 MYH6P13533 1939 aa16.06■□□□□ 0.16
VPS18-203ENST00000558855 EYSQ5T1H1 3165 aa16.06■□□□□ 0.16
VPS18-203ENST00000558855 NEDD4P46934 1319 aa16.05■□□□□ 0.16
VPS18-203ENST00000558855 FRMPD2Q68DX3 1309 aaPredicted RBP16.05■□□□□ 0.16
VPS18-203ENST00000558855 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.05■□□□□ 0.16
VPS18-203ENST00000558855 SLC3A2P08195 630 aaKnown RBP16.05■□□□□ 0.16
VPS18-203ENST00000558855 OAZ1P54368 228 aa16.05■□□□□ 0.16
VPS18-203ENST00000558855 EPHB4P54760 987 aa16.05■□□□□ 0.16
VPS18-203ENST00000558855 RRP12Q5JTH9 1297 aaKnown RBP16.05■□□□□ 0.16
VPS18-203ENST00000558855 ARMCX2Q7L311 632 aa16.05■□□□□ 0.16
VPS18-203ENST00000558855 ZNF467Q7Z7K2 595 aaPredicted RBP16.05■□□□□ 0.16
VPS18-203ENST00000558855 CCDC144CPQ8IYA2 1237 aa16.05■□□□□ 0.16
VPS18-203ENST00000558855 ANKRD35Q8N283 1001 aa16.05■□□□□ 0.16
VPS18-203ENST00000558855 BADQ92934 168 aa16.05■□□□□ 0.16
VPS18-203ENST00000558855 RILPL2Q969X0 211 aa16.05■□□□□ 0.16
VPS18-203ENST00000558855 TMEM47Q9BQJ4 181 aa16.05■□□□□ 0.16
VPS18-203ENST00000558855 CNPY2Q9Y2B0 182 aa16.05■□□□□ 0.16
VPS18-203ENST00000558855 ZMYM6O95789 1325 aa16.04■□□□□ 0.16
VPS18-203ENST00000558855 TRIM6-TRIM34B2RNG4 842 aa16.04■□□□□ 0.16
VPS18-203ENST00000558855 ALAS1P13196 640 aa16.04■□□□□ 0.16
VPS18-203ENST00000558855 SDSP20132 328 aa16.04■□□□□ 0.16
VPS18-203ENST00000558855 NUCB1Q02818 461 aa16.04■□□□□ 0.16
VPS18-203ENST00000558855 ACVR2BQ13705 512 aa16.04■□□□□ 0.16
VPS18-203ENST00000558855 SHHQ15465 462 aa16.04■□□□□ 0.16
VPS18-203ENST00000558855 CCDC144BQ3MJ40 725 aa16.04■□□□□ 0.16
VPS18-203ENST00000558855 FAM160B2Q86V87 743 aa16.04■□□□□ 0.16
VPS18-203ENST00000558855 CHD1LQ86WJ1 897 aa16.04■□□□□ 0.16
VPS18-203ENST00000558855 DEFB123Q8N688 67 aa16.04■□□□□ 0.16
VPS18-203ENST00000558855 CHST13Q8NET6 341 aa16.04■□□□□ 0.16
VPS18-203ENST00000558855 PLA2G6O60733 806 aa16.03■□□□□ 0.16
VPS18-203ENST00000558855 PDE4AP27815 886 aa16.03■□□□□ 0.16
VPS18-203ENST00000558855 ACLYP53396 1101 aa16.03■□□□□ 0.16
VPS18-203ENST00000558855 IKQ13123 557 aaPredicted RBP16.03■□□□□ 0.16
VPS18-203ENST00000558855 C1orf53Q5VUE5 145 aa16.03■□□□□ 0.16
VPS18-203ENST00000558855 MSL3Q8N5Y2 521 aaKnown RBP16.03■□□□□ 0.16
VPS18-203ENST00000558855 ACAD9Q9H845 621 aa16.03■□□□□ 0.16
VPS18-203ENST00000558855 GPCPD1Q9NPB8 672 aa16.03■□□□□ 0.16
VPS18-203ENST00000558855 TOMM22Q9NS69 142 aa16.03■□□□□ 0.16
VPS18-203ENST00000558855 ZBTB47Q9UFB7 747 aaPredicted RBP16.03■□□□□ 0.16
VPS18-203ENST00000558855 FAM184BQ9ULE4 1060 aa16.03■□□□□ 0.16
VPS18-203ENST00000558855 CTDP1Q9Y5B0 961 aaPredicted RBP16.03■□□□□ 0.16
VPS18-203ENST00000558855 GBF1Q92538 1859 aa16.03■□□□□ 0.16
VPS18-203ENST00000558855 PQBP1O60828 265 aaKnown RBP16.02■□□□□ 0.16
VPS18-203ENST00000558855 KCNA10Q16322 511 aa16.02■□□□□ 0.16
VPS18-203ENST00000558855 CCDC96Q2M329 555 aa16.02■□□□□ 0.16
VPS18-203ENST00000558855 RNF180Q86T96 592 aa16.02■□□□□ 0.16
VPS18-203ENST00000558855 CHURC1Q8WUH1 139 aa16.02■□□□□ 0.16
VPS18-203ENST00000558855 TRERF1Q96PN7 1200 aa16.02■□□□□ 0.16
VPS18-203ENST00000558855 ZKSCAN3Q9BRR0 538 aa16.02■□□□□ 0.16
VPS18-203ENST00000558855 UPF3AQ9H1J1 476 aaKnown RBP16.02■□□□□ 0.16
VPS18-203ENST00000558855 RANBP17Q9H2T7 1088 aaKnown RBP16.02■□□□□ 0.16
VPS18-203ENST00000558855 CPVLQ9H3G5 476 aa16.02■□□□□ 0.16
VPS18-203ENST00000558855 OSBPL3Q9H4L5 887 aa16.02■□□□□ 0.16
VPS18-203ENST00000558855 PDGFCQ9NRA1 345 aa16.02■□□□□ 0.16
VPS18-203ENST00000558855 MTMR10Q9NXD2 777 aa16.02■□□□□ 0.16
VPS18-203ENST00000558855 FBXO40Q9UH90 709 aa16.02■□□□□ 0.16
VPS18-203ENST00000558855 CDH23Q9H251 3354 aa16.01■□□□□ 0.15
VPS18-203ENST00000558855 POTEB2H3BUK9 544 aa16.01■□□□□ 0.15
VPS18-203ENST00000558855 NFIBO00712 420 aa16.01■□□□□ 0.15
VPS18-203ENST00000558855 DUSP11O75319 330 aaKnown RBP16.01■□□□□ 0.15
VPS18-203ENST00000558855 BEX3Q00994 111 aa16.01■□□□□ 0.15
VPS18-203ENST00000558855 FAAP100Q0VG06 881 aa16.01■□□□□ 0.15
VPS18-203ENST00000558855 DCAF4Q8WV16 495 aa16.01■□□□□ 0.15
VPS18-203ENST00000558855 LBHD1Q9BQE6 289 aaPredicted RBP16.01■□□□□ 0.15
VPS18-203ENST00000558855 CYP39A1Q9NYL5 469 aa16.01■□□□□ 0.15
VPS18-203ENST00000558855 CLTBP09497 229 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms