RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 AGBL1Q96MI9 1066 aa12.92□□□□□ -0.34
PBX1-213ENST00000558796 FARP2O94887 1054 aaPredicted RBP12.91□□□□□ -0.34
PBX1-213ENST00000558796 TFRCP02786 760 aaKnown RBP12.91□□□□□ -0.34
PBX1-213ENST00000558796 SNHG28P0DPA3 235 aa12.91□□□□□ -0.34
PBX1-213ENST00000558796 FDX1P10109 184 aa12.91□□□□□ -0.34
PBX1-213ENST00000558796 IFIT1BQ5T764 474 aaKnown RBP12.91□□□□□ -0.34
PBX1-213ENST00000558796 OLFML2BQ68BL8 750 aa12.91□□□□□ -0.34
PBX1-213ENST00000558796 CASC1Q6TDU7 716 aa12.91□□□□□ -0.34
PBX1-213ENST00000558796 CHST3Q7LGC8 479 aa12.91□□□□□ -0.34
PBX1-213ENST00000558796 RALYLQ86SE5 291 aaKnown RBP12.91□□□□□ -0.34
PBX1-213ENST00000558796 MAML3Q96JK9 1138 aa12.91□□□□□ -0.34
PBX1-213ENST00000558796 CPVLQ9H3G5 476 aa12.91□□□□□ -0.34
PBX1-213ENST00000558796 RNF146Q9NTX7 359 aa12.91□□□□□ -0.34
PBX1-213ENST00000558796 PPP4R2Q9NY27 417 aa12.91□□□□□ -0.34
PBX1-213ENST00000558796 SLC5A4Q9NY91 659 aa12.91□□□□□ -0.34
PBX1-213ENST00000558796 ALAS1P13196 640 aa12.9□□□□□ -0.34
PBX1-213ENST00000558796 CYBAP13498 195 aa12.9□□□□□ -0.34
PBX1-213ENST00000558796 CNGA1P29973 690 aa12.9□□□□□ -0.34
PBX1-213ENST00000558796 SEC23AQ15436 765 aa12.9□□□□□ -0.34
PBX1-213ENST00000558796 ZNF792Q3KQV3 632 aa12.9□□□□□ -0.34
PBX1-213ENST00000558796 BTNL9Q6UXG8 535 aa12.9□□□□□ -0.34
PBX1-213ENST00000558796 TRPV1Q8NER1 839 aa12.9□□□□□ -0.34
PBX1-213ENST00000558796 NCOA7Q8NI08 942 aa12.9□□□□□ -0.34
PBX1-213ENST00000558796 DIS3LQ8TF46 1054 aaKnown RBP12.9□□□□□ -0.34
PBX1-213ENST00000558796 DDX11Q96FC9 970 aa12.9□□□□□ -0.34
PBX1-213ENST00000558796 CRISPLD2Q9H0B8 497 aa12.9□□□□□ -0.34
PBX1-213ENST00000558796 RANBP17Q9H2T7 1088 aaKnown RBP12.9□□□□□ -0.34
PBX1-213ENST00000558796 ACAD9Q9H845 621 aa12.9□□□□□ -0.34
PBX1-213ENST00000558796 CCPG1Q9ULG6 757 aa12.9□□□□□ -0.34
PBX1-213ENST00000558796 SLC27A2O14975 620 aa12.89□□□□□ -0.35
PBX1-213ENST00000558796 IGHA2P01877 340 aa12.89□□□□□ -0.35
PBX1-213ENST00000558796 ANTXR2P58335 489 aa12.89□□□□□ -0.35
PBX1-213ENST00000558796 MUM1L1Q5H9M0 696 aa12.89□□□□□ -0.35
PBX1-213ENST00000558796 CREB3L3Q68CJ9 461 aa12.89□□□□□ -0.35
PBX1-213ENST00000558796 UBE2Q1Q7Z7E8 422 aa12.89□□□□□ -0.35
PBX1-213ENST00000558796 MB21D2Q8IYB1 491 aaPredicted RBP12.89□□□□□ -0.35
PBX1-213ENST00000558796 ANKRD35Q8N283 1001 aa12.89□□□□□ -0.35
PBX1-213ENST00000558796 CHST13Q8NET6 341 aa12.89□□□□□ -0.35
PBX1-213ENST00000558796 ANKS1AQ92625 1134 aa12.89□□□□□ -0.35
PBX1-213ENST00000558796 TRERF1Q96PN7 1200 aa12.89□□□□□ -0.35
PBX1-213ENST00000558796 UBA5Q9GZZ9 404 aa12.89□□□□□ -0.35
PBX1-213ENST00000558796 SENP2Q9HC62 589 aa12.89□□□□□ -0.35
PBX1-213ENST00000558796 FBXO40Q9UH90 709 aa12.89□□□□□ -0.35
PBX1-213ENST00000558796 KIAA1217Q5T5P2 1943 aa12.88□□□□□ -0.35
PBX1-213ENST00000558796 IFIT3O14879 490 aaKnown RBP12.88□□□□□ -0.35
PBX1-213ENST00000558796 ICAM1P05362 532 aa12.88□□□□□ -0.35
PBX1-213ENST00000558796 COL9A3Q14050 684 aaPredicted RBP12.88□□□□□ -0.35
PBX1-213ENST00000558796 TKFCQ3LXA3 575 aa12.88□□□□□ -0.35
PBX1-213ENST00000558796 PRAMEF19Q5SWL8 479 aa12.88□□□□□ -0.35
PBX1-213ENST00000558796 GPATCH4Q5T3I0 446 aaKnown RBP12.88□□□□□ -0.35
PBX1-213ENST00000558796 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.88□□□□□ -0.35
PBX1-213ENST00000558796 A1CFQ9NQ94 594 aaKnown RBP12.88□□□□□ -0.35
PBX1-213ENST00000558796 DNAJC25-GNG10A0A024R161 153 aa12.87□□□□□ -0.35
PBX1-213ENST00000558796 ERICH2A1L162 156 aa12.87□□□□□ -0.35
PBX1-213ENST00000558796 PARP1P09874 1014 aaKnown RBP12.87□□□□□ -0.35
PBX1-213ENST00000558796 WTAPQ15007 396 aa12.87□□□□□ -0.35
PBX1-213ENST00000558796 SART3Q15020 963 aaKnown RBP12.87□□□□□ -0.35
PBX1-213ENST00000558796 NECTIN1Q15223 517 aa12.87□□□□□ -0.35
PBX1-213ENST00000558796 ASPRV1Q53RT3 343 aa12.87□□□□□ -0.35
PBX1-213ENST00000558796 TMEM67Q5HYA8 995 aa12.87□□□□□ -0.35
PBX1-213ENST00000558796 ERICH6BQ5W0A0 696 aa12.87□□□□□ -0.35
PBX1-213ENST00000558796 ANO1Q5XXA6 986 aa12.87□□□□□ -0.35
PBX1-213ENST00000558796 LHX8Q68G74 356 aa12.87□□□□□ -0.35
PBX1-213ENST00000558796 PAWRQ96IZ0 340 aaKnown RBP12.87□□□□□ -0.35
PBX1-213ENST00000558796 FGD4Q96M96 766 aa12.87□□□□□ -0.35
PBX1-213ENST00000558796 TINF2Q9BSI4 451 aa12.87□□□□□ -0.35
PBX1-213ENST00000558796 DDX20Q9UHI6 824 aaKnown RBP12.87□□□□□ -0.35
PBX1-213ENST00000558796 OGDHLQ9ULD0 1010 aa12.87□□□□□ -0.35
PBX1-213ENST00000558796 DIS3Q9Y2L1 958 aaKnown RBP12.87□□□□□ -0.35
PBX1-213ENST00000558796 NFIBO00712 420 aa12.86□□□□□ -0.35
PBX1-213ENST00000558796 PRC1O43663 620 aa12.86□□□□□ -0.35
PBX1-213ENST00000558796 DHX16O60231 1041 aaKnown RBP12.86□□□□□ -0.35
PBX1-213ENST00000558796 MNX1P50219 401 aaPredicted RBP12.86□□□□□ -0.35
PBX1-213ENST00000558796 CNTN2Q02246 1040 aa12.86□□□□□ -0.35
PBX1-213ENST00000558796 CDC37Q16543 378 aaPredicted RBP12.86□□□□□ -0.35
PBX1-213ENST00000558796 USH1GQ495M9 461 aa12.86□□□□□ -0.35
PBX1-213ENST00000558796 NSMFQ6X4W1 530 aa12.86□□□□□ -0.35
PBX1-213ENST00000558796 STAG2Q8N3U4 1231 aa12.86□□□□□ -0.35
PBX1-213ENST00000558796 GPHNQ9NQX3 736 aaPredicted RBP12.86□□□□□ -0.35
PBX1-213ENST00000558796 PFASO15067 1338 aa12.86□□□□□ -0.35
PBX1-213ENST00000558796 POTEB2H3BUK9 544 aa12.85□□□□□ -0.35
PBX1-213ENST00000558796 SEPT4O43236 478 aa12.85□□□□□ -0.35
PBX1-213ENST00000558796 ADGRF4Q8IZF3 695 aa12.85□□□□□ -0.35
PBX1-213ENST00000558796 ANKLE1Q8NAG6 615 aa12.85□□□□□ -0.35
PBX1-213ENST00000558796 LENG1Q96BZ8 264 aaPredicted RBP12.85□□□□□ -0.35
PBX1-213ENST00000558796 LY9Q9HBG7 655 aa12.85□□□□□ -0.35
PBX1-213ENST00000558796 VAT1LQ9HCJ6 419 aa12.85□□□□□ -0.35
PBX1-213ENST00000558796 CYP39A1Q9NYL5 469 aa12.85□□□□□ -0.35
PBX1-213ENST00000558796 MAD2L2Q9UI95 211 aa12.85□□□□□ -0.35
PBX1-213ENST00000558796 ZHX1Q9UKY1 873 aaPredicted RBP12.85□□□□□ -0.35
PBX1-213ENST00000558796 CNPY2Q9Y2B0 182 aa12.85□□□□□ -0.35
PBX1-213ENST00000558796 DDX49Q9Y6V7 483 aaKnown RBP12.85□□□□□ -0.35
PBX1-213ENST00000558796 WDR19Q8NEZ3 1342 aa12.85□□□□□ -0.35
PBX1-213ENST00000558796 SYNGAP1Q96PV0 1343 aa12.85□□□□□ -0.35
PBX1-213ENST00000558796 PTPDC1A2A3K4 754 aa12.84□□□□□ -0.35
PBX1-213ENST00000558796 MSCO60682 206 aa12.84□□□□□ -0.35
PBX1-213ENST00000558796 SNAI1O95863 264 aaPredicted RBP12.84□□□□□ -0.35
PBX1-213ENST00000558796 MYCNP04198 464 aaPredicted RBP12.84□□□□□ -0.35
PBX1-213ENST00000558796 MCM5P33992 734 aa12.84□□□□□ -0.35
PBX1-213ENST00000558796 GRM4Q14833 912 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms