RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 FAM227BQ96M60 508 aa13.67□□□□□ -0.22
CASC4-205ENST00000558735 YTHDC1Q96MU7 727 aaKnown RBP13.67□□□□□ -0.22
CASC4-205ENST00000558735 LNPKQ9C0E8 428 aa13.67□□□□□ -0.22
CASC4-205ENST00000558735 PLIN4Q96Q06 1357 aa13.67□□□□□ -0.22
CASC4-205ENST00000558735 PGK1P00558 417 aa13.66□□□□□ -0.22
CASC4-205ENST00000558735 IGHDP01880 384 aa13.66□□□□□ -0.22
CASC4-205ENST00000558735 CLTBP09497 229 aa13.66□□□□□ -0.22
CASC4-205ENST00000558735 ITGB8P26012 769 aa13.66□□□□□ -0.22
CASC4-205ENST00000558735 NOVP48745 357 aa13.66□□□□□ -0.22
CASC4-205ENST00000558735 EPHB4P54760 987 aa13.66□□□□□ -0.22
CASC4-205ENST00000558735 AAMPQ13685 434 aa13.66□□□□□ -0.22
CASC4-205ENST00000558735 MCMDC2Q4G0Z9 681 aa13.66□□□□□ -0.22
CASC4-205ENST00000558735 RCSD1Q6JBY9 416 aa13.66□□□□□ -0.22
CASC4-205ENST00000558735 MSL3Q8N5Y2 521 aaKnown RBP13.66□□□□□ -0.22
CASC4-205ENST00000558735 CHURC1Q8WUH1 139 aa13.66□□□□□ -0.22
CASC4-205ENST00000558735 STAG1Q8WVM7 1258 aa13.66□□□□□ -0.22
CASC4-205ENST00000558735 GMCL1Q96IK5 515 aa13.66□□□□□ -0.22
CASC4-205ENST00000558735 RNPC3Q96LT9 517 aaKnown RBP13.66□□□□□ -0.22
CASC4-205ENST00000558735 CTDP1Q9Y5B0 961 aaPredicted RBP13.66□□□□□ -0.22
CASC4-205ENST00000558735 BDP1A6H8Y1 2624 aa13.65□□□□□ -0.22
CASC4-205ENST00000558735 A0A0D9SFI3 127 aa13.65□□□□□ -0.22
CASC4-205ENST00000558735 TSPY2A6NKD2 308 aa13.65□□□□□ -0.22
CASC4-205ENST00000558735 TNFRSF10AO00220 468 aa13.65□□□□□ -0.22
CASC4-205ENST00000558735 RANBP6O60518 1105 aaKnown RBP13.65□□□□□ -0.22
CASC4-205ENST00000558735 PLA2G6O60733 806 aa13.65□□□□□ -0.22
CASC4-205ENST00000558735 FDX1P10109 184 aa13.65□□□□□ -0.22
CASC4-205ENST00000558735 RARBP10826 455 aa13.65□□□□□ -0.22
CASC4-205ENST00000558735 OAZ1P54368 228 aa13.65□□□□□ -0.22
CASC4-205ENST00000558735 B4GALNT3Q6L9W6 998 aa13.65□□□□□ -0.22
CASC4-205ENST00000558735 ANKRD33Q7Z3H0 272 aa13.65□□□□□ -0.22
CASC4-205ENST00000558735 ZNF467Q7Z7K2 595 aaPredicted RBP13.65□□□□□ -0.22
CASC4-205ENST00000558735 TICAM2Q86XR7 235 aa13.65□□□□□ -0.22
CASC4-205ENST00000558735 CHST13Q8NET6 341 aa13.65□□□□□ -0.22
CASC4-205ENST00000558735 FGD4Q96M96 766 aa13.65□□□□□ -0.22
CASC4-205ENST00000558735 TOX2Q96NM4 488 aa13.65□□□□□ -0.22
CASC4-205ENST00000558735 RWDD1Q9H446 243 aaPredicted RBP13.65□□□□□ -0.22
CASC4-205ENST00000558735 XPNPEP3Q9NQH7 507 aa13.65□□□□□ -0.22
CASC4-205ENST00000558735 ZNF536O15090 1300 aa13.64□□□□□ -0.23
CASC4-205ENST00000558735 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.64□□□□□ -0.23
CASC4-205ENST00000558735 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.64□□□□□ -0.23
CASC4-205ENST00000558735 ORC4O43929 436 aa13.64□□□□□ -0.23
CASC4-205ENST00000558735 HSPD1P10809 573 aaKnown RBP13.64□□□□□ -0.23
CASC4-205ENST00000558735 AKR1A1P14550 325 aa13.64□□□□□ -0.23
CASC4-205ENST00000558735 SLC1A4P43007 532 aa13.64□□□□□ -0.23
CASC4-205ENST00000558735 STAT2P52630 851 aa13.64□□□□□ -0.23
CASC4-205ENST00000558735 NMIQ13287 307 aaPredicted RBP13.64□□□□□ -0.23
CASC4-205ENST00000558735 GRIN2CQ14957 1233 aa13.64□□□□□ -0.23
CASC4-205ENST00000558735 KCTD1Q719H9 257 aa13.64□□□□□ -0.23
CASC4-205ENST00000558735 ZNF589Q86UQ0 364 aaPredicted RBP13.64□□□□□ -0.23
CASC4-205ENST00000558735 FAM160B2Q86V87 743 aa13.64□□□□□ -0.23
CASC4-205ENST00000558735 ANKRD35Q8N283 1001 aa13.64□□□□□ -0.23
CASC4-205ENST00000558735 USP38Q8NB14 1042 aa13.64□□□□□ -0.23
CASC4-205ENST00000558735 EXOC6Q8TAG9 804 aa13.64□□□□□ -0.23
CASC4-205ENST00000558735 LENG1Q96BZ8 264 aaPredicted RBP13.64□□□□□ -0.23
CASC4-205ENST00000558735 AGBL1Q96MI9 1066 aa13.64□□□□□ -0.23
CASC4-205ENST00000558735 FBXO40Q9UH90 709 aa13.64□□□□□ -0.23
CASC4-205ENST00000558735 FAM184BQ9ULE4 1060 aa13.64□□□□□ -0.23
CASC4-205ENST00000558735 STX8Q9UNK0 236 aa13.64□□□□□ -0.23
CASC4-205ENST00000558735 CNPY2Q9Y2B0 182 aa13.64□□□□□ -0.23
CASC4-205ENST00000558735 SYNGAP1Q96PV0 1343 aa13.64□□□□□ -0.23
CASC4-205ENST00000558735 TRIM6-TRIM34B2RNG4 842 aa13.63□□□□□ -0.23
CASC4-205ENST00000558735 ADAMTS4O75173 837 aa13.63□□□□□ -0.23
CASC4-205ENST00000558735 COL9A1P20849 921 aa13.63□□□□□ -0.23
CASC4-205ENST00000558735 DNAJB2P25686 324 aa13.63□□□□□ -0.23
CASC4-205ENST00000558735 SNAP25P60880 206 aa13.63□□□□□ -0.23
CASC4-205ENST00000558735 CNTN2Q02246 1040 aa13.63□□□□□ -0.23
CASC4-205ENST00000558735 FPGSQ05932 587 aa13.63□□□□□ -0.23
CASC4-205ENST00000558735 ACVR2BQ13705 512 aa13.63□□□□□ -0.23
CASC4-205ENST00000558735 PPP4R3BQ5MIZ7 849 aa13.63□□□□□ -0.23
CASC4-205ENST00000558735 RASGRP2Q7LDG7 609 aa13.63□□□□□ -0.23
CASC4-205ENST00000558735 RNF180Q86T96 592 aa13.63□□□□□ -0.23
CASC4-205ENST00000558735 PLEKHM2Q8IWE5 1019 aa13.63□□□□□ -0.23
CASC4-205ENST00000558735 KLHDC9Q8NEP7 349 aa13.63□□□□□ -0.23
CASC4-205ENST00000558735 ATXN2LQ8WWM7 1075 aaKnown RBP13.63□□□□□ -0.23
CASC4-205ENST00000558735 TSEN34Q9BSV6 310 aaKnown RBP13.63□□□□□ -0.23
CASC4-205ENST00000558735 HOMER2Q9NSB8 354 aa13.63□□□□□ -0.23
CASC4-205ENST00000558735 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.63□□□□□ -0.23
CASC4-205ENST00000558735 CHD7Q9P2D1 2997 aa13.63□□□□□ -0.23
CASC4-205ENST00000558735 MYH4Q9Y623 1939 aa13.62□□□□□ -0.23
CASC4-205ENST00000558735 A0A1W2PQ45 241 aaPredicted RBP13.62□□□□□ -0.23
CASC4-205ENST00000558735 A0A1W2PQY0 241 aa13.62□□□□□ -0.23
CASC4-205ENST00000558735 RAG1P15918 1043 aa13.62□□□□□ -0.23
CASC4-205ENST00000558735 IRX5P78411 483 aaPredicted RBP13.62□□□□□ -0.23
CASC4-205ENST00000558735 NUCB1Q02818 461 aa13.62□□□□□ -0.23
CASC4-205ENST00000558735 FAAP100Q0VG06 881 aa13.62□□□□□ -0.23
CASC4-205ENST00000558735 AKNAD1Q5T1N1 836 aa13.62□□□□□ -0.23
CASC4-205ENST00000558735 CCSAPQ6IQ19 270 aaPredicted RBP13.62□□□□□ -0.23
CASC4-205ENST00000558735 CHD1LQ86WJ1 897 aa13.62□□□□□ -0.23
CASC4-205ENST00000558735 FAM133AQ8N9E0 248 aa13.62□□□□□ -0.23
CASC4-205ENST00000558735 RILPL2Q969X0 211 aa13.62□□□□□ -0.23
CASC4-205ENST00000558735 ABHD16BQ9H3Z7 469 aa13.62□□□□□ -0.23
CASC4-205ENST00000558735 OSBPL3Q9H4L5 887 aa13.62□□□□□ -0.23
CASC4-205ENST00000558735 ZNF576Q9H609 170 aa13.62□□□□□ -0.23
CASC4-205ENST00000558735 TCP11L1Q9NUJ3 509 aa13.62□□□□□ -0.23
CASC4-205ENST00000558735 PRR12Q9ULL5 1215 aa13.62□□□□□ -0.23
CASC4-205ENST00000558735 ISY1Q9ULR0 285 aaKnown RBP13.62□□□□□ -0.23
CASC4-205ENST00000558735 MTMR7Q9Y216 660 aa13.62□□□□□ -0.23
CASC4-205ENST00000558735 SOWAHBA6NEL2 793 aa13.61□□□□□ -0.23
CASC4-205ENST00000558735 ADCY6O43306 1168 aa13.61□□□□□ -0.23
CASC4-205ENST00000558735 DUSP11O75319 330 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms