RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 ANKRD35Q8N283 1001 aa18.25■□□□□ 0.51
CSHL1-208ENST00000558609 ARRDC4Q8NCT1 418 aa18.25■□□□□ 0.51
CSHL1-208ENST00000558609 IL25Q9H293 177 aa18.25■□□□□ 0.51
CSHL1-208ENST00000558609 MTMR7Q9Y216 660 aa18.25■□□□□ 0.51
CSHL1-208ENST00000558609 LAMA4Q16363 1823 aa18.25■□□□□ 0.51
CSHL1-208ENST00000558609 RAD50Q92878 1312 aa18.24■□□□□ 0.51
CSHL1-208ENST00000558609 DLL1O00548 723 aa18.24■□□□□ 0.51
CSHL1-208ENST00000558609 CCDC96Q2M329 555 aa18.24■□□□□ 0.51
CSHL1-208ENST00000558609 CCDC178Q5BJE1 867 aa18.24■□□□□ 0.51
CSHL1-208ENST00000558609 DGKHQ86XP1 1220 aa18.24■□□□□ 0.51
CSHL1-208ENST00000558609 SLC17A8Q8NDX2 589 aa18.24■□□□□ 0.51
CSHL1-208ENST00000558609 LRCH3Q96II8 777 aa18.24■□□□□ 0.51
CSHL1-208ENST00000558609 AGBL1Q96MI9 1066 aa18.24■□□□□ 0.51
CSHL1-208ENST00000558609 ACAD9Q9H845 621 aa18.24■□□□□ 0.51
CSHL1-208ENST00000558609 SYNGAP1Q96PV0 1343 aa18.23■□□□□ 0.51
CSHL1-208ENST00000558609 ZNF865P0CJ78 1059 aaPredicted RBP18.23■□□□□ 0.51
CSHL1-208ENST00000558609 PDHBP11177 359 aa18.23■□□□□ 0.51
CSHL1-208ENST00000558609 CHMLP26374 656 aa18.23■□□□□ 0.51
CSHL1-208ENST00000558609 ANO1Q5XXA6 986 aa18.23■□□□□ 0.51
CSHL1-208ENST00000558609 TTBK2Q6IQ55 1244 aa18.23■□□□□ 0.51
CSHL1-208ENST00000558609 C7orf61Q8IZ16 206 aa18.23■□□□□ 0.51
CSHL1-208ENST00000558609 RUFY2Q8WXA3 655 aa18.23■□□□□ 0.51
CSHL1-208ENST00000558609 HOMER2Q9NSB8 354 aa18.23■□□□□ 0.51
CSHL1-208ENST00000558609 CNPY2Q9Y2B0 182 aa18.23■□□□□ 0.51
CSHL1-208ENST00000558609 SMCHD1A6NHR9 2005 aa18.23■□□□□ 0.51
CSHL1-208ENST00000558609 KDM4AO75164 1064 aa18.22■□□□□ 0.51
CSHL1-208ENST00000558609 SNAI1O95863 264 aaPredicted RBP18.22■□□□□ 0.51
CSHL1-208ENST00000558609 SNHG28P0DPA3 235 aa18.22■□□□□ 0.51
CSHL1-208ENST00000558609 TAL1P17542 331 aaPredicted RBP18.22■□□□□ 0.51
CSHL1-208ENST00000558609 SNAP25P60880 206 aa18.22■□□□□ 0.51
CSHL1-208ENST00000558609 LRRC26Q2I0M4 334 aa18.22■□□□□ 0.51
CSHL1-208ENST00000558609 GJC2Q5T442 439 aaPredicted RBP18.22■□□□□ 0.51
CSHL1-208ENST00000558609 CCDC174Q6PII3 467 aa18.22■□□□□ 0.51
CSHL1-208ENST00000558609 IQCA1Q86XH1 822 aa18.22■□□□□ 0.51
CSHL1-208ENST00000558609 ANKS1AQ92625 1134 aa18.22■□□□□ 0.51
CSHL1-208ENST00000558609 FGD4Q96M96 766 aa18.22■□□□□ 0.51
CSHL1-208ENST00000558609 TRERF1Q96PN7 1200 aa18.22■□□□□ 0.51
CSHL1-208ENST00000558609 ZKSCAN3Q9BRR0 538 aa18.22■□□□□ 0.51
CSHL1-208ENST00000558609 SENP6Q9GZR1 1112 aaPredicted RBP18.22■□□□□ 0.51
CSHL1-208ENST00000558609 RANBP17Q9H2T7 1088 aaKnown RBP18.22■□□□□ 0.51
CSHL1-208ENST00000558609 RNF146Q9NTX7 359 aa18.22■□□□□ 0.51
CSHL1-208ENST00000558609 B4E1Z4 1266 aa18.21■□□□□ 0.51
CSHL1-208ENST00000558609 ICAM1P05362 532 aa18.21■□□□□ 0.51
CSHL1-208ENST00000558609 ALAS1P13196 640 aa18.21■□□□□ 0.51
CSHL1-208ENST00000558609 SLC16A2P36021 539 aa18.21■□□□□ 0.51
CSHL1-208ENST00000558609 ZNF543Q08ER8 600 aa18.21■□□□□ 0.51
CSHL1-208ENST00000558609 SYDE2Q5VT97 1194 aa18.21■□□□□ 0.51
CSHL1-208ENST00000558609 KRT23Q9C075 422 aa18.21■□□□□ 0.51
CSHL1-208ENST00000558609 CNNM2Q9H8M5 875 aa18.21■□□□□ 0.51
CSHL1-208ENST00000558609 GPCPD1Q9NPB8 672 aa18.21■□□□□ 0.51
CSHL1-208ENST00000558609 A1CFQ9NQ94 594 aaKnown RBP18.21■□□□□ 0.51
CSHL1-208ENST00000558609 ZSWIM5Q9P217 1185 aa18.21■□□□□ 0.51
CSHL1-208ENST00000558609 FRMPD2Q68DX3 1309 aaPredicted RBP18.21■□□□□ 0.51
CSHL1-208ENST00000558609 A0A1W2PPC1 479 aa18.2■□□□□ 0.5
CSHL1-208ENST00000558609 KBTBD13C9JR72 458 aa18.2■□□□□ 0.5
CSHL1-208ENST00000558609 RARBP10826 455 aa18.2■□□□□ 0.5
CSHL1-208ENST00000558609 AKR1A1P14550 325 aa18.2■□□□□ 0.5
CSHL1-208ENST00000558609 LRRC41Q15345 812 aa18.2■□□□□ 0.5
CSHL1-208ENST00000558609 FAM133AQ8N9E0 248 aa18.2■□□□□ 0.5
CSHL1-208ENST00000558609 ZSCAN10Q96SZ4 725 aaPredicted RBP18.2■□□□□ 0.5
CSHL1-208ENST00000558609 CCPG1Q9ULG6 757 aa18.2■□□□□ 0.5
CSHL1-208ENST00000558609 POTEB2H3BUK9 544 aa18.19■□□□□ 0.5
CSHL1-208ENST00000558609 CNTN2Q02246 1040 aa18.19■□□□□ 0.5
CSHL1-208ENST00000558609 MUM1L1Q5H9M0 696 aa18.19■□□□□ 0.5
CSHL1-208ENST00000558609 GPATCH4Q5T3I0 446 aaKnown RBP18.19■□□□□ 0.5
CSHL1-208ENST00000558609 XPNPEP3Q9NQH7 507 aa18.19■□□□□ 0.5
CSHL1-208ENST00000558609 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.19■□□□□ 0.5
CSHL1-208ENST00000558609 FAM184BQ9ULE4 1060 aa18.19■□□□□ 0.5
CSHL1-208ENST00000558609 ZMYND8Q9ULU4 1186 aaPredicted RBP18.19■□□□□ 0.5
CSHL1-208ENST00000558609 SGSM2O43147 1006 aa18.18■□□□□ 0.5
CSHL1-208ENST00000558609 PTH1RQ03431 593 aa18.18■□□□□ 0.5
CSHL1-208ENST00000558609 ACVR2BQ13705 512 aa18.18■□□□□ 0.5
CSHL1-208ENST00000558609 ARMCX2Q7L311 632 aa18.18■□□□□ 0.5
CSHL1-208ENST00000558609 ENAHQ8N8S7 591 aaPredicted RBP18.18■□□□□ 0.5
CSHL1-208ENST00000558609 PNMA1Q8ND90 353 aa18.18■□□□□ 0.5
CSHL1-208ENST00000558609 ABHD16BQ9H3Z7 469 aa18.18■□□□□ 0.5
CSHL1-208ENST00000558609 KAT14Q9H8E8 782 aa18.18■□□□□ 0.5
CSHL1-208ENST00000558609 CYP39A1Q9NYL5 469 aa18.18■□□□□ 0.5
CSHL1-208ENST00000558609 PNMA2Q9UL42 364 aa18.18■□□□□ 0.5
CSHL1-208ENST00000558609 SOWAHBA6NEL2 793 aa18.17■□□□□ 0.5
CSHL1-208ENST00000558609 MYCNP04198 464 aaPredicted RBP18.17■□□□□ 0.5
CSHL1-208ENST00000558609 RNF180Q86T96 592 aa18.17■□□□□ 0.5
CSHL1-208ENST00000558609 GDF15Q99988 308 aa18.17■□□□□ 0.5
CSHL1-208ENST00000558609 PHF24Q9UPV7 400 aa18.17■□□□□ 0.5
CSHL1-208ENST00000558609 U3KPZ7 1027 aaPredicted RBP18.17■□□□□ 0.5
CSHL1-208ENST00000558609 TNKSO95271 1327 aa18.17■□□□□ 0.5
CSHL1-208ENST00000558609 DNAH12Q6ZR08 3092 aa18.17■□□□□ 0.5
CSHL1-208ENST00000558609 PGK1P00558 417 aa18.16■□□□□ 0.5
CSHL1-208ENST00000558609 SYN1P17600 705 aa18.16■□□□□ 0.5
CSHL1-208ENST00000558609 BMP8BP34820 402 aa18.16■□□□□ 0.5
CSHL1-208ENST00000558609 ADCYAP1R1P41586 468 aa18.16■□□□□ 0.5
CSHL1-208ENST00000558609 ATN1P54259 1190 aaPredicted RBP18.16■□□□□ 0.5
CSHL1-208ENST00000558609 SLC39A5Q6ZMH5 540 aa18.16■□□□□ 0.5
CSHL1-208ENST00000558609 CCDC144CPQ8IYA2 1237 aa18.16■□□□□ 0.5
CSHL1-208ENST00000558609 UBAC1Q9BSL1 405 aa18.16■□□□□ 0.5
CSHL1-208ENST00000558609 KATNBL1Q9H079 304 aa18.16■□□□□ 0.5
CSHL1-208ENST00000558609 ZHX1Q9UKY1 873 aaPredicted RBP18.16■□□□□ 0.5
CSHL1-208ENST00000558609 MCM3APO60318 1980 aa18.15■□□□□ 0.5
CSHL1-208ENST00000558609 ASB14A6NK59 587 aa18.15■□□□□ 0.5
CSHL1-208ENST00000558609 ADAMTS4O75173 837 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms