RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 ZNF467Q7Z7K2 595 aaPredicted RBP19.69■□□□□ 0.74
NEK9-211ENST00000557673 MYLIPQ8WY64 445 aa19.69■□□□□ 0.74
NEK9-211ENST00000557673 NACAP1Q9BZK3 213 aa19.69■□□□□ 0.74
NEK9-211ENST00000557673 SPC25Q9HBM1 224 aa19.69■□□□□ 0.74
NEK9-211ENST00000557673 HELLSQ9NRZ9 838 aa19.69■□□□□ 0.74
NEK9-211ENST00000557673 MROH7Q68CQ1 1323 aa19.69■□□□□ 0.74
NEK9-211ENST00000557673 PARP14Q460N5 1801 aa19.69■□□□□ 0.74
NEK9-211ENST00000557673 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.68■□□□□ 0.74
NEK9-211ENST00000557673 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.68■□□□□ 0.74
NEK9-211ENST00000557673 FOXP2O15409 715 aa19.68■□□□□ 0.74
NEK9-211ENST00000557673 DUSP11O75319 330 aaKnown RBP19.68■□□□□ 0.74
NEK9-211ENST00000557673 PRDM1O75626 825 aa19.68■□□□□ 0.74
NEK9-211ENST00000557673 PCSK9Q8NBP7 692 aaKnown RBP19.68■□□□□ 0.74
NEK9-211ENST00000557673 KLHDC9Q8NEP7 349 aa19.68■□□□□ 0.74
NEK9-211ENST00000557673 GLT1D1Q96MS3 346 aa19.68■□□□□ 0.74
NEK9-211ENST00000557673 NAPBQ9H115 298 aa19.68■□□□□ 0.74
NEK9-211ENST00000557673 FBXO40Q9UH90 709 aa19.68■□□□□ 0.74
NEK9-211ENST00000557673 SYNPO2Q9UMS6 1093 aa19.68■□□□□ 0.74
NEK9-211ENST00000557673 ELP1O95163 1332 aa19.68■□□□□ 0.74
NEK9-211ENST00000557673 SYNRGQ9UMZ2 1314 aa19.68■□□□□ 0.74
NEK9-211ENST00000557673 COL11A1P12107 1806 aaPredicted RBP19.67■□□□□ 0.74
NEK9-211ENST00000557673 FAAP100Q0VG06 881 aa19.67■□□□□ 0.74
NEK9-211ENST00000557673 KCNA10Q16322 511 aa19.67■□□□□ 0.74
NEK9-211ENST00000557673 ZNF589Q86UQ0 364 aaPredicted RBP19.67■□□□□ 0.74
NEK9-211ENST00000557673 SYMPKQ92797 1274 aaKnown RBP19.67■□□□□ 0.74
NEK9-211ENST00000557673 NUP88Q99567 741 aaPredicted RBP19.67■□□□□ 0.74
NEK9-211ENST00000557673 ZHX1Q9UKY1 873 aaPredicted RBP19.67■□□□□ 0.74
NEK9-211ENST00000557673 CCDC171Q6TFL3 1326 aa19.67■□□□□ 0.74
NEK9-211ENST00000557673 DNAJC25-GNG10A0A024R161 153 aa19.66■□□□□ 0.74
NEK9-211ENST00000557673 SNAI1O95863 264 aaPredicted RBP19.66■□□□□ 0.74
NEK9-211ENST00000557673 NDUFB10O96000 172 aa19.66■□□□□ 0.74
NEK9-211ENST00000557673 TIMP1P01033 207 aa19.66■□□□□ 0.74
NEK9-211ENST00000557673 CST5P28325 142 aaPredicted RBP19.66■□□□□ 0.74
NEK9-211ENST00000557673 EPHB4P54760 987 aa19.66■□□□□ 0.74
NEK9-211ENST00000557673 MCMDC2Q4G0Z9 681 aa19.66■□□□□ 0.74
NEK9-211ENST00000557673 VPS53Q5VIR6 699 aa19.66■□□□□ 0.74
NEK9-211ENST00000557673 ZNF444Q8N0Y2 327 aaPredicted RBP19.66■□□□□ 0.74
NEK9-211ENST00000557673 ANKRD35Q8N283 1001 aa19.66■□□□□ 0.74
NEK9-211ENST00000557673 LENG1Q96BZ8 264 aaPredicted RBP19.66■□□□□ 0.74
NEK9-211ENST00000557673 ABHD16BQ9H3Z7 469 aa19.66■□□□□ 0.74
NEK9-211ENST00000557673 CLIP2Q9UDT6 1046 aa19.66■□□□□ 0.74
NEK9-211ENST00000557673 FEM1BQ9UK73 627 aa19.66■□□□□ 0.74
NEK9-211ENST00000557673 RAD50Q92878 1312 aa19.66■□□□□ 0.74
NEK9-211ENST00000557673 PLXNA1Q9UIW2 1896 aa19.66■□□□□ 0.74
NEK9-211ENST00000557673 SLC4A3P48751 1232 aa19.65■□□□□ 0.74
NEK9-211ENST00000557673 OAZ1P54368 228 aa19.65■□□□□ 0.74
NEK9-211ENST00000557673 PPARAQ07869 468 aa19.65■□□□□ 0.74
NEK9-211ENST00000557673 ACVR2BQ13705 512 aa19.65■□□□□ 0.74
NEK9-211ENST00000557673 CCSAPQ6IQ19 270 aaPredicted RBP19.65■□□□□ 0.74
NEK9-211ENST00000557673 CWC27Q6UX04 472 aaKnown RBP19.65■□□□□ 0.74
NEK9-211ENST00000557673 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.65■□□□□ 0.74
NEK9-211ENST00000557673 CPXCR1Q8N123 301 aa19.65■□□□□ 0.74
NEK9-211ENST00000557673 CHST13Q8NET6 341 aa19.65■□□□□ 0.74
NEK9-211ENST00000557673 VTI1AQ96AJ9 217 aa19.65■□□□□ 0.74
NEK9-211ENST00000557673 RIPK3Q9Y572 518 aa19.65■□□□□ 0.74
NEK9-211ENST00000557673 C6orf222P0C671 652 aaPredicted RBP19.64■□□□□ 0.73
NEK9-211ENST00000557673 FDX1P10109 184 aa19.64■□□□□ 0.73
NEK9-211ENST00000557673 CHMLP26374 656 aa19.64■□□□□ 0.73
NEK9-211ENST00000557673 PPIGQ13427 754 aaKnown RBP eCLIP19.64■□□□□ 0.733e-6■■□□□ 13.6
NEK9-211ENST00000557673 MFSD5Q6N075 450 aa19.64■□□□□ 0.73
NEK9-211ENST00000557673 MKL1Q969V6 931 aa19.64■□□□□ 0.73
NEK9-211ENST00000557673 KIFC2Q96AC6 838 aa19.64■□□□□ 0.73
NEK9-211ENST00000557673 IL25Q9H293 177 aa19.64■□□□□ 0.73
NEK9-211ENST00000557673 SLC38A10Q9HBR0 1119 aa19.64■□□□□ 0.73
NEK9-211ENST00000557673 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.64■□□□□ 0.73
NEK9-211ENST00000557673 MYH4Q9Y623 1939 aa19.64■□□□□ 0.73
NEK9-211ENST00000557673 IGKV6D-41A0A0C4DH26 115 aa19.63■□□□□ 0.73
NEK9-211ENST00000557673 DNAJB2P25686 324 aa19.63■□□□□ 0.73
NEK9-211ENST00000557673 TBX21Q9UL17 535 aa19.63■□□□□ 0.73
NEK9-211ENST00000557673 A0A0U1RQG5 324 aaPredicted RBP19.62■□□□□ 0.73
NEK9-211ENST00000557673 TLR3O15455 904 aaKnown RBP19.62■□□□□ 0.73
NEK9-211ENST00000557673 TTLL1O95922 423 aa19.62■□□□□ 0.73
NEK9-211ENST00000557673 ASGR1P07306 291 aa19.62■□□□□ 0.73
NEK9-211ENST00000557673 SLC3A2P08195 630 aaKnown RBP19.62■□□□□ 0.73
NEK9-211ENST00000557673 CDK7P50613 346 aa19.62■□□□□ 0.73
NEK9-211ENST00000557673 MFAP1P55081 439 aaKnown RBP19.62■□□□□ 0.73
NEK9-211ENST00000557673 GJA9P57773 515 aa19.62■□□□□ 0.73
NEK9-211ENST00000557673 CTDSPL2Q05D32 466 aa19.62■□□□□ 0.73
NEK9-211ENST00000557673 PDE4BQ07343 736 aa19.62■□□□□ 0.73
NEK9-211ENST00000557673 CCDC144BQ3MJ40 725 aa19.62■□□□□ 0.73
NEK9-211ENST00000557673 GNASQ5JWF2 1037 aa19.62■□□□□ 0.73
NEK9-211ENST00000557673 TMEM199Q8N511 208 aa19.62■□□□□ 0.73
NEK9-211ENST00000557673 GMCL1P1Q8NEA9 526 aa19.62■□□□□ 0.73
NEK9-211ENST00000557673 CEP95Q96GE4 821 aa19.62■□□□□ 0.73
NEK9-211ENST00000557673 UPF3AQ9H1J1 476 aaKnown RBP19.62■□□□□ 0.73
NEK9-211ENST00000557673 RAVER2Q9HCJ3 691 aaKnown RBP19.62■□□□□ 0.73
NEK9-211ENST00000557673 MTMR4Q9NYA4 1195 aa19.62■□□□□ 0.73
NEK9-211ENST00000557673 PLIN4Q96Q06 1357 aa19.61■□□□□ 0.73
NEK9-211ENST00000557673 ZMYM6O95789 1325 aa19.61■□□□□ 0.73
NEK9-211ENST00000557673 TIFAQ96CG3 184 aa19.61■□□□□ 0.73
NEK9-211ENST00000557673 ZNF576Q9H609 170 aa19.61■□□□□ 0.73
NEK9-211ENST00000557673 INCENPQ9NQS7 918 aa19.61■□□□□ 0.73
NEK9-211ENST00000557673 VCANP13611 3396 aa19.6■□□□□ 0.73
NEK9-211ENST00000557673 EYSQ5T1H1 3165 aa19.6■□□□□ 0.73
NEK9-211ENST00000557673 ARVCFO00192 962 aa19.6■□□□□ 0.73
NEK9-211ENST00000557673 TSPY3P0CV98 308 aa19.6■□□□□ 0.73
NEK9-211ENST00000557673 TSPY8P0CW00 308 aa19.6■□□□□ 0.73
NEK9-211ENST00000557673 GRIN2CQ14957 1233 aa19.6■□□□□ 0.73
NEK9-211ENST00000557673 PPP4R3BQ5MIZ7 849 aa19.6■□□□□ 0.73
NEK9-211ENST00000557673 ARMCX2Q7L311 632 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms