RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ZC3H13Q5T200 1668 aaKnown RBP5.83□□□□□ -1.48
SRP54-212ENST00000556992 LTKP29376 864 aa5.83□□□□□ -1.48
SRP54-212ENST00000556992 CAP2P40123 477 aa5.83□□□□□ -1.48
SRP54-212ENST00000556992 LINC00310P59036 64 aa5.83□□□□□ -1.48
SRP54-212ENST00000556992 MAP3K11Q16584 847 aa5.83□□□□□ -1.48
SRP54-212ENST00000556992 TIGD5Q53EQ6 642 aa5.83□□□□□ -1.48
SRP54-212ENST00000556992 C20orf173Q96LM9 149 aa5.83□□□□□ -1.48
SRP54-212ENST00000556992 SRCIN1Q9C0H9 1055 aa5.83□□□□□ -1.48
SRP54-212ENST00000556992 C12orf49Q9H741 205 aa5.83□□□□□ -1.48
SRP54-212ENST00000556992 TJP2Q9UDY2 1190 aa5.83□□□□□ -1.48
SRP54-212ENST00000556992 CAMSAP1Q5T5Y3 1602 aa5.83□□□□□ -1.48
SRP54-212ENST00000556992 NEXMIFQ5QGS0 1516 aa5.83□□□□□ -1.48
SRP54-212ENST00000556992 NLRP1Q9C000 1473 aa5.83□□□□□ -1.48
SRP54-212ENST00000556992 KIAA1210Q9ULL0 1709 aa5.82□□□□□ -1.48
SRP54-212ENST00000556992 NSD2O96028 1365 aa5.82□□□□□ -1.48
SRP54-212ENST00000556992 PIK3C2BO00750 1634 aa5.82□□□□□ -1.48
SRP54-212ENST00000556992 HPXP02790 462 aa5.82□□□□□ -1.48
SRP54-212ENST00000556992 MED14OSP0DP75 135 aa5.82□□□□□ -1.48
SRP54-212ENST00000556992 GALK1P51570 392 aa5.82□□□□□ -1.48
SRP54-212ENST00000556992 CTSWP56202 376 aa5.82□□□□□ -1.48
SRP54-212ENST00000556992 FMR1Q06787 632 aaKnown RBP eCLIP5.82□□□□□ -1.48
SRP54-212ENST00000556992 AMIGO3Q86WK7 504 aa5.82□□□□□ -1.48
SRP54-212ENST00000556992 SP110Q9HB58 689 aa5.82□□□□□ -1.48
SRP54-212ENST00000556992 SNCAIPQ9Y6H5 919 aa5.82□□□□□ -1.48
SRP54-212ENST00000556992 ASXL1Q8IXJ9 1541 aa5.82□□□□□ -1.48
SRP54-212ENST00000556992 ARHGEF40Q8TER5 1519 aa5.82□□□□□ -1.48
SRP54-212ENST00000556992 CEP152O94986 1710 aa5.82□□□□□ -1.48
SRP54-212ENST00000556992 METP08581 1390 aa5.81□□□□□ -1.48
SRP54-212ENST00000556992 PLEKHG1Q9ULL1 1385 aa5.81□□□□□ -1.48
SRP54-212ENST00000556992 FYB1O15117 783 aa5.81□□□□□ -1.48
SRP54-212ENST00000556992 PGRP06401 933 aa5.81□□□□□ -1.48
SRP54-212ENST00000556992 HOXA5P20719 270 aa5.81□□□□□ -1.48
SRP54-212ENST00000556992 TPP2P29144 1249 aaPredicted RBP5.81□□□□□ -1.48
SRP54-212ENST00000556992 MTHFSP49914 203 aa5.81□□□□□ -1.48
SRP54-212ENST00000556992 ZNF746Q6NUN9 644 aaPredicted RBP5.81□□□□□ -1.48
SRP54-212ENST00000556992 C14orf37Q86TY3 774 aa5.81□□□□□ -1.48
SRP54-212ENST00000556992 FBF1Q8TES7 1133 aa5.81□□□□□ -1.48
SRP54-212ENST00000556992 DUSP15Q9H1R2 295 aaPredicted RBP5.81□□□□□ -1.48
SRP54-212ENST00000556992 PNNQ9H307 717 aaKnown RBP5.81□□□□□ -1.48
SRP54-212ENST00000556992 FAM8A1Q9UBU6 413 aa5.81□□□□□ -1.48
SRP54-212ENST00000556992 FAM135BQ49AJ0 1406 aa5.81□□□□□ -1.48
SRP54-212ENST00000556992 NSD3Q9BZ95 1437 aa5.81□□□□□ -1.48
SRP54-212ENST00000556992 POLR3AO14802 1390 aaPredicted RBP5.8□□□□□ -1.48
SRP54-212ENST00000556992 GFRA2O00451 464 aa5.8□□□□□ -1.48
SRP54-212ENST00000556992 GLDCP23378 1020 aa5.8□□□□□ -1.48
SRP54-212ENST00000556992 KIR3DL1P43629 444 aa5.8□□□□□ -1.48
SRP54-212ENST00000556992 TNNT2P45379 298 aaPredicted RBP5.8□□□□□ -1.48
SRP54-212ENST00000556992 ZNF605Q86T29 641 aa5.8□□□□□ -1.48
SRP54-212ENST00000556992 CCDC120Q96HB5 630 aa5.8□□□□□ -1.48
SRP54-212ENST00000556992 SLC26A8Q96RN1 970 aa5.8□□□□□ -1.48
SRP54-212ENST00000556992 SGPP1Q9BX95 441 aa5.8□□□□□ -1.48
SRP54-212ENST00000556992 MCOLN1Q9GZU1 580 aa5.8□□□□□ -1.48
SRP54-212ENST00000556992 RNF19AQ9NV58 838 aa5.8□□□□□ -1.48
SRP54-212ENST00000556992 TMEM131LA2VDJ0 1609 aa5.8□□□□□ -1.48
SRP54-212ENST00000556992 STRCQ7RTU9 1775 aa5.8□□□□□ -1.48
SRP54-212ENST00000556992 RNF123Q5XPI4 1314 aa5.79□□□□□ -1.48
SRP54-212ENST00000556992 ALKQ9UM73 1620 aa5.79□□□□□ -1.48
SRP54-212ENST00000556992 MYOCOSA0A1B0GUC4 107 aa5.79□□□□□ -1.48
SRP54-212ENST00000556992 LRRN2O75325 713 aa5.79□□□□□ -1.48
SRP54-212ENST00000556992 CYP7A1P22680 504 aa5.79□□□□□ -1.48
SRP54-212ENST00000556992 HSPA1LP34931 641 aa5.79□□□□□ -1.48
SRP54-212ENST00000556992 EGR3Q06889 387 aa5.79□□□□□ -1.48
SRP54-212ENST00000556992 SCARA3Q6AZY7 606 aa5.79□□□□□ -1.48
SRP54-212ENST00000556992 DNAJB8Q8NHS0 232 aa5.79□□□□□ -1.48
SRP54-212ENST00000556992 RUNDC1Q96C34 613 aa5.79□□□□□ -1.48
SRP54-212ENST00000556992 TMEM87BQ96K49 555 aa5.79□□□□□ -1.48
SRP54-212ENST00000556992 RGS17Q9UGC6 210 aaPredicted RBP5.79□□□□□ -1.48
SRP54-212ENST00000556992 DUSP13Q9UII6 198 aa5.79□□□□□ -1.48
SRP54-212ENST00000556992 RCAN3Q9UKA8 241 aa5.79□□□□□ -1.48
SRP54-212ENST00000556992 SPG7Q9UQ90 795 aa5.79□□□□□ -1.48
SRP54-212ENST00000556992 APAF1O14727 1248 aa5.78□□□□□ -1.48
SRP54-212ENST00000556992 TECPR2O15040 1411 aa5.78□□□□□ -1.48
SRP54-212ENST00000556992 P4HBP07237 508 aaKnown RBP5.78□□□□□ -1.48
SRP54-212ENST00000556992 ZGLP1P0C6A0 271 aa5.78□□□□□ -1.48
SRP54-212ENST00000556992 BMP7P18075 431 aa5.78□□□□□ -1.48
SRP54-212ENST00000556992 ALG1LQ6GMV1 187 aa5.78□□□□□ -1.48
SRP54-212ENST00000556992 SV2BQ7L1I2 683 aa5.78□□□□□ -1.48
SRP54-212ENST00000556992 TMPRSS7Q7RTY8 843 aa5.78□□□□□ -1.48
SRP54-212ENST00000556992 ANKRD24Q8TF21 1146 aa5.78□□□□□ -1.48
SRP54-212ENST00000556992 SIGLEC1Q9BZZ2 1709 aa5.78□□□□□ -1.48
SRP54-212ENST00000556992 GNEQ9Y223 722 aaKnown RBP5.78□□□□□ -1.48
SRP54-212ENST00000556992 CORINQ9Y5Q5 1042 aa5.78□□□□□ -1.48
SRP54-212ENST00000556992 KIF1BO60333 1816 aa5.78□□□□□ -1.48
SRP54-212ENST00000556992 IQGAP1P46940 1657 aa5.78□□□□□ -1.48
SRP54-212ENST00000556992 DLC1Q96QB1 1528 aa5.78□□□□□ -1.48
SRP54-212ENST00000556992 PLEKHH1Q9ULM0 1364 aa5.78□□□□□ -1.48
SRP54-212ENST00000556992 BLMP54132 1417 aaPredicted RBP5.77□□□□□ -1.49
SRP54-212ENST00000556992 UPK3BL1B0FP48 263 aa5.77□□□□□ -1.49
SRP54-212ENST00000556992 UPK3BL2E5RIL1 263 aa5.77□□□□□ -1.49
SRP54-212ENST00000556992 E9PSI1 815 aa5.77□□□□□ -1.49
SRP54-212ENST00000556992 DIAPH1O60610 1272 aaKnown RBP5.77□□□□□ -1.49
SRP54-212ENST00000556992 U2AF1L5P0DN76 240 aaPredicted RBP5.77□□□□□ -1.49
SRP54-212ENST00000556992 U2AF1Q01081 240 aaKnown RBP eCLIP5.77□□□□□ -1.492e-52■■■■■ 92.8
SRP54-212ENST00000556992 ATP2B2Q01814 1243 aa5.77□□□□□ -1.49
SRP54-212ENST00000556992 SLFN5Q08AF3 891 aa5.77□□□□□ -1.49
SRP54-212ENST00000556992 CCDC85BQ15834 202 aaPredicted RBP5.77□□□□□ -1.49
SRP54-212ENST00000556992 CCDC27Q2M243 656 aa5.77□□□□□ -1.49
SRP54-212ENST00000556992 GAB4Q2WGN9 574 aa5.77□□□□□ -1.49
SRP54-212ENST00000556992 WDR63Q8IWG1 891 aa5.77□□□□□ -1.49
SRP54-212ENST00000556992 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms