RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 DIS3LQ8TF46 1054 aaKnown RBP12.18□□□□□ -0.46
SNX6-208ENST00000556712 TTC14Q96N46 770 aa12.18□□□□□ -0.46
SNX6-208ENST00000556712 UBAC1Q9BSL1 405 aa12.18□□□□□ -0.46
SNX6-208ENST00000556712 KAT14Q9H8E8 782 aa12.18□□□□□ -0.46
SNX6-208ENST00000556712 PLA2G6O60733 806 aa12.17□□□□□ -0.46
SNX6-208ENST00000556712 CDC45O75419 566 aa12.17□□□□□ -0.46
SNX6-208ENST00000556712 IGHA2P01877 340 aa12.17□□□□□ -0.46
SNX6-208ENST00000556712 ALAS1P13196 640 aa12.17□□□□□ -0.46
SNX6-208ENST00000556712 CYBAP13498 195 aa12.17□□□□□ -0.46
SNX6-208ENST00000556712 OAZ1P54368 228 aa12.17□□□□□ -0.46
SNX6-208ENST00000556712 ANTXR2P58335 489 aa12.17□□□□□ -0.46
SNX6-208ENST00000556712 TRDNQ13061 729 aa12.17□□□□□ -0.46
SNX6-208ENST00000556712 SEC23AQ15436 765 aa12.17□□□□□ -0.46
SNX6-208ENST00000556712 PRAMEF19Q5SWL8 479 aa12.17□□□□□ -0.46
SNX6-208ENST00000556712 OLFML2BQ68BL8 750 aa12.17□□□□□ -0.46
SNX6-208ENST00000556712 KIAA1211Q6ZU35 1233 aa12.17□□□□□ -0.46
SNX6-208ENST00000556712 RALYLQ86SE5 291 aaKnown RBP12.17□□□□□ -0.46
SNX6-208ENST00000556712 CRISPLD2Q9H0B8 497 aa12.17□□□□□ -0.46
SNX6-208ENST00000556712 RANBP17Q9H2T7 1088 aaKnown RBP12.17□□□□□ -0.46
SNX6-208ENST00000556712 SENP2Q9HC62 589 aa12.17□□□□□ -0.46
SNX6-208ENST00000556712 RNF146Q9NTX7 359 aa12.17□□□□□ -0.46
SNX6-208ENST00000556712 PDE4DIPQ5VU43 2346 aa12.17□□□□□ -0.46
SNX6-208ENST00000556712 SLC27A2O14975 620 aa12.16□□□□□ -0.46
SNX6-208ENST00000556712 CNGA1P29973 690 aa12.16□□□□□ -0.46
SNX6-208ENST00000556712 NT5C2P49902 561 aa12.16□□□□□ -0.46
SNX6-208ENST00000556712 ZNF792Q3KQV3 632 aa12.16□□□□□ -0.46
SNX6-208ENST00000556712 MUM1L1Q5H9M0 696 aa12.16□□□□□ -0.46
SNX6-208ENST00000556712 IFIT1BQ5T764 474 aaKnown RBP12.16□□□□□ -0.46
SNX6-208ENST00000556712 ANO1Q5XXA6 986 aa12.16□□□□□ -0.46
SNX6-208ENST00000556712 BTNL9Q6UXG8 535 aa12.16□□□□□ -0.46
SNX6-208ENST00000556712 UBE2Q1Q7Z7E8 422 aa12.16□□□□□ -0.46
SNX6-208ENST00000556712 MB21D2Q8IYB1 491 aaPredicted RBP12.16□□□□□ -0.46
SNX6-208ENST00000556712 ANKRD35Q8N283 1001 aa12.16□□□□□ -0.46
SNX6-208ENST00000556712 CHST13Q8NET6 341 aa12.16□□□□□ -0.46
SNX6-208ENST00000556712 NCOA7Q8NI08 942 aa12.16□□□□□ -0.46
SNX6-208ENST00000556712 FGD4Q96M96 766 aa12.16□□□□□ -0.46
SNX6-208ENST00000556712 TRERF1Q96PN7 1200 aa12.16□□□□□ -0.46
SNX6-208ENST00000556712 UBA5Q9GZZ9 404 aa12.16□□□□□ -0.46
SNX6-208ENST00000556712 ACAD9Q9H845 621 aa12.16□□□□□ -0.46
SNX6-208ENST00000556712 SLC5A4Q9NY91 659 aa12.16□□□□□ -0.46
SNX6-208ENST00000556712 CCPG1Q9ULG6 757 aa12.16□□□□□ -0.46
SNX6-208ENST00000556712 DNAJC25-GNG10A0A024R161 153 aa12.15□□□□□ -0.46
SNX6-208ENST00000556712 IFIT3O14879 490 aaKnown RBP12.15□□□□□ -0.46
SNX6-208ENST00000556712 ICAM1P05362 532 aa12.15□□□□□ -0.46
SNX6-208ENST00000556712 FDX1P10109 184 aa12.15□□□□□ -0.46
SNX6-208ENST00000556712 CNTN2Q02246 1040 aa12.15□□□□□ -0.46
SNX6-208ENST00000556712 CCDC178Q5BJE1 867 aa12.15□□□□□ -0.46
SNX6-208ENST00000556712 CREB3L3Q68CJ9 461 aa12.15□□□□□ -0.46
SNX6-208ENST00000556712 LHX8Q68G74 356 aa12.15□□□□□ -0.46
SNX6-208ENST00000556712 ANKS1AQ92625 1134 aa12.15□□□□□ -0.46
SNX6-208ENST00000556712 DDX11Q96FC9 970 aa12.15□□□□□ -0.46
SNX6-208ENST00000556712 A1CFQ9NQ94 594 aaKnown RBP12.15□□□□□ -0.46
SNX6-208ENST00000556712 PPP4R2Q9NY27 417 aa12.15□□□□□ -0.46
SNX6-208ENST00000556712 MNX1P50219 401 aaPredicted RBP12.14□□□□□ -0.47
SNX6-208ENST00000556712 ASPRV1Q53RT3 343 aa12.14□□□□□ -0.47
SNX6-208ENST00000556712 GPATCH4Q5T3I0 446 aaKnown RBP12.14□□□□□ -0.47
SNX6-208ENST00000556712 CASC1Q6TDU7 716 aa12.14□□□□□ -0.47
SNX6-208ENST00000556712 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.14□□□□□ -0.47
SNX6-208ENST00000556712 STAG2Q8N3U4 1231 aa12.14□□□□□ -0.47
SNX6-208ENST00000556712 LENG1Q96BZ8 264 aaPredicted RBP12.14□□□□□ -0.47
SNX6-208ENST00000556712 PAWRQ96IZ0 340 aaKnown RBP12.14□□□□□ -0.47
SNX6-208ENST00000556712 TINF2Q9BSI4 451 aa12.14□□□□□ -0.47
SNX6-208ENST00000556712 GPHNQ9NQX3 736 aaPredicted RBP12.14□□□□□ -0.47
SNX6-208ENST00000556712 FBXO40Q9UH90 709 aa12.14□□□□□ -0.47
SNX6-208ENST00000556712 DDX20Q9UHI6 824 aaKnown RBP12.14□□□□□ -0.47
SNX6-208ENST00000556712 OGDHLQ9ULD0 1010 aa12.14□□□□□ -0.47
SNX6-208ENST00000556712 DDX49Q9Y6V7 483 aaKnown RBP12.14□□□□□ -0.47
SNX6-208ENST00000556712 NFIBO00712 420 aa12.13□□□□□ -0.47
SNX6-208ENST00000556712 PARP1P09874 1014 aaKnown RBP12.13□□□□□ -0.47
SNX6-208ENST00000556712 WTAPQ15007 396 aa12.13□□□□□ -0.47
SNX6-208ENST00000556712 NECTIN1Q15223 517 aa12.13□□□□□ -0.47
SNX6-208ENST00000556712 CDC37Q16543 378 aaPredicted RBP12.13□□□□□ -0.47
SNX6-208ENST00000556712 USH1GQ495M9 461 aa12.13□□□□□ -0.47
SNX6-208ENST00000556712 TMEM67Q5HYA8 995 aa12.13□□□□□ -0.47
SNX6-208ENST00000556712 NSMFQ6X4W1 530 aa12.13□□□□□ -0.47
SNX6-208ENST00000556712 PURBQ96QR8 312 aaKnown RBP12.13□□□□□ -0.47
SNX6-208ENST00000556712 RNF216Q9NWF9 866 aaPredicted RBP12.13□□□□□ -0.47
SNX6-208ENST00000556712 ASTN1O14525 1302 aa12.12□□□□□ -0.47
SNX6-208ENST00000556712 ERICH2A1L162 156 aa12.12□□□□□ -0.47
SNX6-208ENST00000556712 POTEB2H3BUK9 544 aa12.12□□□□□ -0.47
SNX6-208ENST00000556712 PRC1O43663 620 aa12.12□□□□□ -0.47
SNX6-208ENST00000556712 DHX16O60231 1041 aaKnown RBP12.12□□□□□ -0.47
SNX6-208ENST00000556712 TKFCQ3LXA3 575 aa12.12□□□□□ -0.47
SNX6-208ENST00000556712 SLC30A10Q6XR72 485 aa12.12□□□□□ -0.47
SNX6-208ENST00000556712 ADGRF4Q8IZF3 695 aa12.12□□□□□ -0.47
SNX6-208ENST00000556712 FAM133AQ8N9E0 248 aa12.12□□□□□ -0.47
SNX6-208ENST00000556712 ANKLE1Q8NAG6 615 aa12.12□□□□□ -0.47
SNX6-208ENST00000556712 MYL10Q9BUA6 226 aa12.12□□□□□ -0.47
SNX6-208ENST00000556712 LRRC2Q9BYS8 371 aa12.12□□□□□ -0.47
SNX6-208ENST00000556712 LY9Q9HBG7 655 aa12.12□□□□□ -0.47
SNX6-208ENST00000556712 CYP39A1Q9NYL5 469 aa12.12□□□□□ -0.47
SNX6-208ENST00000556712 MAD2L2Q9UI95 211 aa12.12□□□□□ -0.47
SNX6-208ENST00000556712 ZHX1Q9UKY1 873 aaPredicted RBP12.12□□□□□ -0.47
SNX6-208ENST00000556712 DIS3Q9Y2L1 958 aaKnown RBP12.12□□□□□ -0.47
SNX6-208ENST00000556712 PFASO15067 1338 aa12.11□□□□□ -0.47
SNX6-208ENST00000556712 SOWAHBA6NEL2 793 aa12.11□□□□□ -0.47
SNX6-208ENST00000556712 SEPT4O43236 478 aa12.11□□□□□ -0.47
SNX6-208ENST00000556712 SNAI1O95863 264 aaPredicted RBP12.11□□□□□ -0.47
SNX6-208ENST00000556712 MYCNP04198 464 aaPredicted RBP12.11□□□□□ -0.47
SNX6-208ENST00000556712 ZNF865P0CJ78 1059 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms