RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 CHURC1Q8WUH1 139 aa13.57□□□□□ -0.24
SLIRP-205ENST00000556310 SHISA4Q96DD7 197 aa13.57□□□□□ -0.24
SLIRP-205ENST00000556310 ESYT1Q9BSJ8 1104 aa13.57□□□□□ -0.24
SLIRP-205ENST00000556310 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.57□□□□□ -0.24
SLIRP-205ENST00000556310 PAK6Q9NQU5 681 aaPredicted RBP13.57□□□□□ -0.24
SLIRP-205ENST00000556310 CTDP1Q9Y5B0 961 aaPredicted RBP13.57□□□□□ -0.24
SLIRP-205ENST00000556310 ATMINO43313 823 aaPredicted RBP13.56□□□□□ -0.24
SLIRP-205ENST00000556310 CYP21A2P08686 494 aa13.56□□□□□ -0.24
SLIRP-205ENST00000556310 FCER1AP12319 257 aa13.56□□□□□ -0.24
SLIRP-205ENST00000556310 TRIM32Q13049 653 aa13.56□□□□□ -0.24
SLIRP-205ENST00000556310 IKQ13123 557 aaPredicted RBP13.56□□□□□ -0.24
SLIRP-205ENST00000556310 CCL14Q16627 93 aa13.56□□□□□ -0.24
SLIRP-205ENST00000556310 ERICH6BQ5W0A0 696 aa13.56□□□□□ -0.24
SLIRP-205ENST00000556310 KCTD1Q719H9 257 aa13.56□□□□□ -0.24
SLIRP-205ENST00000556310 DGKHQ86XP1 1220 aa13.56□□□□□ -0.24
SLIRP-205ENST00000556310 U2AF1L4Q8WU68 220 aaKnown RBP13.56□□□□□ -0.24
SLIRP-205ENST00000556310 MAP4K1Q92918 833 aa13.56□□□□□ -0.24
SLIRP-205ENST00000556310 DCBLD2Q96PD2 775 aa13.56□□□□□ -0.24
SLIRP-205ENST00000556310 MTMR7Q9Y216 660 aa13.56□□□□□ -0.24
SLIRP-205ENST00000556310 RPTORQ8N122 1335 aa13.56□□□□□ -0.24
SLIRP-205ENST00000556310 PDHBP11177 359 aa13.55□□□□□ -0.24
SLIRP-205ENST00000556310 CAPN2P17655 700 aa13.55□□□□□ -0.24
SLIRP-205ENST00000556310 TRDNQ13061 729 aa13.55□□□□□ -0.24
SLIRP-205ENST00000556310 KIAA1211Q6ZU35 1233 aa13.55□□□□□ -0.24
SLIRP-205ENST00000556310 DPP9Q86TI2 863 aa13.55□□□□□ -0.24
SLIRP-205ENST00000556310 NPLOC4Q8TAT6 608 aa13.55□□□□□ -0.24
SLIRP-205ENST00000556310 SP7Q8TDD2 431 aaPredicted RBP13.55□□□□□ -0.24
SLIRP-205ENST00000556310 CHMP4CQ96CF2 233 aa13.55□□□□□ -0.24
SLIRP-205ENST00000556310 ZSCAN10Q96SZ4 725 aaPredicted RBP13.55□□□□□ -0.24
SLIRP-205ENST00000556310 MMP19Q99542 508 aa13.55□□□□□ -0.24
SLIRP-205ENST00000556310 ZKSCAN3Q9BRR0 538 aa13.55□□□□□ -0.24
SLIRP-205ENST00000556310 HMX1Q9NP08 348 aaPredicted RBP13.55□□□□□ -0.24
SLIRP-205ENST00000556310 SLC5A4Q9NY91 659 aa13.55□□□□□ -0.24
SLIRP-205ENST00000556310 RBM8AQ9Y5S9 174 aaKnown RBP13.55□□□□□ -0.24
SLIRP-205ENST00000556310 TNKSO95271 1327 aa13.55□□□□□ -0.24
SLIRP-205ENST00000556310 COBLO75128 1261 aa13.54□□□□□ -0.24
SLIRP-205ENST00000556310 CDC45O75419 566 aa13.54□□□□□ -0.24
SLIRP-205ENST00000556310 SGPL1O95470 568 aa13.54□□□□□ -0.24
SLIRP-205ENST00000556310 IGHA2P01877 340 aa13.54□□□□□ -0.24
SLIRP-205ENST00000556310 SNHG28P0DPA3 235 aa13.54□□□□□ -0.24
SLIRP-205ENST00000556310 CACNB2Q08289 660 aaPredicted RBP13.54□□□□□ -0.24
SLIRP-205ENST00000556310 KCTD2Q14681 263 aa13.54□□□□□ -0.24
SLIRP-205ENST00000556310 MFSD14CQ5VZR4 134 aa13.54□□□□□ -0.24
SLIRP-205ENST00000556310 OLFML2BQ68BL8 750 aa13.54□□□□□ -0.24
SLIRP-205ENST00000556310 ASTLQ6HA08 431 aaPredicted RBP13.54□□□□□ -0.24
SLIRP-205ENST00000556310 BTNL9Q6UXG8 535 aa13.54□□□□□ -0.24
SLIRP-205ENST00000556310 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.54□□□□□ -0.24
SLIRP-205ENST00000556310 CPXCR1Q8N123 301 aa13.54□□□□□ -0.24
SLIRP-205ENST00000556310 ENAHQ8N8S7 591 aaPredicted RBP13.54□□□□□ -0.24
SLIRP-205ENST00000556310 ANKS1AQ92625 1134 aa13.54□□□□□ -0.24
SLIRP-205ENST00000556310 DEFB118Q96PH6 123 aa13.54□□□□□ -0.24
SLIRP-205ENST00000556310 UBAC1Q9BSL1 405 aa13.54□□□□□ -0.24
SLIRP-205ENST00000556310 LSG1Q9H089 658 aaKnown RBP13.54□□□□□ -0.24
SLIRP-205ENST00000556310 RAVER2Q9HCJ3 691 aaKnown RBP13.54□□□□□ -0.24
SLIRP-205ENST00000556310 FLRT1Q9NZU1 646 aa13.54□□□□□ -0.24
SLIRP-205ENST00000556310 ZSWIM5Q9P217 1185 aa13.54□□□□□ -0.24
SLIRP-205ENST00000556310 FBXO40Q9UH90 709 aa13.54□□□□□ -0.24
SLIRP-205ENST00000556310 PRR12Q9ULL5 1215 aa13.54□□□□□ -0.24
SLIRP-205ENST00000556310 ZNF543Q08ER8 600 aa13.53□□□□□ -0.24
SLIRP-205ENST00000556310 CASC1Q6TDU7 716 aa13.53□□□□□ -0.24
SLIRP-205ENST00000556310 RALYLQ86SE5 291 aaKnown RBP13.53□□□□□ -0.24
SLIRP-205ENST00000556310 PNMA1Q8ND90 353 aa13.53□□□□□ -0.24
SLIRP-205ENST00000556310 CHST13Q8NET6 341 aa13.53□□□□□ -0.24
SLIRP-205ENST00000556310 CRISPLD2Q9H0B8 497 aa13.53□□□□□ -0.24
SLIRP-205ENST00000556310 KAT14Q9H8E8 782 aa13.53□□□□□ -0.24
SLIRP-205ENST00000556310 RIPK3Q9Y572 518 aa13.53□□□□□ -0.24
SLIRP-205ENST00000556310 ZNF536O15090 1300 aa13.53□□□□□ -0.24
SLIRP-205ENST00000556310 FRMPD2Q68DX3 1309 aaPredicted RBP13.53□□□□□ -0.24
SLIRP-205ENST00000556310 MYH6P13533 1939 aa13.52□□□□□ -0.24
SLIRP-205ENST00000556310 E7EWF7 191 aa13.52□□□□□ -0.25
SLIRP-205ENST00000556310 TKFCQ3LXA3 575 aa13.52□□□□□ -0.25
SLIRP-205ENST00000556310 GPATCH4Q5T3I0 446 aaKnown RBP13.52□□□□□ -0.25
SLIRP-205ENST00000556310 SYDE2Q5VT97 1194 aa13.52□□□□□ -0.25
SLIRP-205ENST00000556310 TTBK2Q6IQ55 1244 aa13.52□□□□□ -0.25
SLIRP-205ENST00000556310 STOX1Q6ZVD7 989 aa13.52□□□□□ -0.25
SLIRP-205ENST00000556310 CYB5R4Q7L1T6 521 aa13.52□□□□□ -0.25
SLIRP-205ENST00000556310 NCOA7Q8NI08 942 aa13.52□□□□□ -0.25
SLIRP-205ENST00000556310 MAML3Q96JK9 1138 aa13.52□□□□□ -0.25
SLIRP-205ENST00000556310 RANBP17Q9H2T7 1088 aaKnown RBP13.52□□□□□ -0.25
SLIRP-205ENST00000556310 GPCPD1Q9NPB8 672 aa13.52□□□□□ -0.25
SLIRP-205ENST00000556310 ANO2Q9NQ90 1003 aa13.52□□□□□ -0.25
SLIRP-205ENST00000556310 PPP4R2Q9NY27 417 aa13.52□□□□□ -0.25
SLIRP-205ENST00000556310 DIS3Q9Y2L1 958 aaKnown RBP13.52□□□□□ -0.25
SLIRP-205ENST00000556310 TAF6LQ9Y6J9 622 aa13.52□□□□□ -0.25
SLIRP-205ENST00000556310 SMCHD1A6NHR9 2005 aa13.52□□□□□ -0.25
SLIRP-205ENST00000556310 MCM3APO60318 1980 aa13.51□□□□□ -0.25
SLIRP-205ENST00000556310 LCTP09848 1927 aa13.51□□□□□ -0.25
SLIRP-205ENST00000556310 PPP1R37O75864 691 aa13.51□□□□□ -0.25
SLIRP-205ENST00000556310 FARP2O94887 1054 aaPredicted RBP13.51□□□□□ -0.25
SLIRP-205ENST00000556310 PGK2P07205 417 aa13.51□□□□□ -0.25
SLIRP-205ENST00000556310 CYP2C19P33261 490 aa13.51□□□□□ -0.25
SLIRP-205ENST00000556310 SLC16A2P36021 539 aa13.51□□□□□ -0.25
SLIRP-205ENST00000556310 SLC4A3P48751 1232 aa13.51□□□□□ -0.25
SLIRP-205ENST00000556310 SEC23AQ15436 765 aa13.51□□□□□ -0.25
SLIRP-205ENST00000556310 ZNF792Q3KQV3 632 aa13.51□□□□□ -0.25
SLIRP-205ENST00000556310 IFIT1BQ5T764 474 aaKnown RBP13.51□□□□□ -0.25
SLIRP-205ENST00000556310 UBE2Q1Q7Z7E8 422 aa13.51□□□□□ -0.25
SLIRP-205ENST00000556310 ACAD9Q9H845 621 aa13.51□□□□□ -0.25
SLIRP-205ENST00000556310 RNF146Q9NTX7 359 aa13.51□□□□□ -0.25
SLIRP-205ENST00000556310 LRRC37A2A6NM11 1700 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms