RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 SYNGAP1Q96PV0 1343 aa15.79■□□□□ 0.12
TGFB3-204ENST00000556285 SYNRGQ9UMZ2 1314 aa15.79■□□□□ 0.12
TGFB3-204ENST00000556285 TMEM232C9JQI7 657 aa15.79■□□□□ 0.12
TGFB3-204ENST00000556285 PTGS1P23219 599 aa15.79■□□□□ 0.12
TGFB3-204ENST00000556285 SNAP25P60880 206 aa15.79■□□□□ 0.12
TGFB3-204ENST00000556285 RNF180Q86T96 592 aa15.79■□□□□ 0.12
TGFB3-204ENST00000556285 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.79■□□□□ 0.12
TGFB3-204ENST00000556285 MYLIPQ8WY64 445 aa15.79■□□□□ 0.12
TGFB3-204ENST00000556285 SEMA6BQ9H3T3 888 aa15.79■□□□□ 0.12
TGFB3-204ENST00000556285 IL17RBQ9NRM6 502 aa15.79■□□□□ 0.12
TGFB3-204ENST00000556285 ZHX1Q9UKY1 873 aaPredicted RBP15.79■□□□□ 0.12
TGFB3-204ENST00000556285 ISY1Q9ULR0 285 aaKnown RBP15.79■□□□□ 0.12
TGFB3-204ENST00000556285 CTDP1Q9Y5B0 961 aaPredicted RBP15.79■□□□□ 0.12
TGFB3-204ENST00000556285 ZNF536O15090 1300 aa15.78■□□□□ 0.12
TGFB3-204ENST00000556285 MCCP23508 829 aa15.78■□□□□ 0.12
TGFB3-204ENST00000556285 ACLYP53396 1101 aa15.78■□□□□ 0.12
TGFB3-204ENST00000556285 CNTN2Q02246 1040 aa15.78■□□□□ 0.12
TGFB3-204ENST00000556285 ZNF697Q5TEC3 545 aa15.78■□□□□ 0.12
TGFB3-204ENST00000556285 CCSAPQ6IQ19 270 aaPredicted RBP15.78■□□□□ 0.12
TGFB3-204ENST00000556285 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.78■□□□□ 0.12
TGFB3-204ENST00000556285 ANKRD35Q8N283 1001 aa15.78■□□□□ 0.12
TGFB3-204ENST00000556285 MSL3Q8N5Y2 521 aaKnown RBP15.78■□□□□ 0.12
TGFB3-204ENST00000556285 KLHDC9Q8NEP7 349 aa15.78■□□□□ 0.12
TGFB3-204ENST00000556285 AGBL1Q96MI9 1066 aa15.78■□□□□ 0.12
TGFB3-204ENST00000556285 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.78■□□□□ 0.12
TGFB3-204ENST00000556285 FAM184BQ9ULE4 1060 aa15.78■□□□□ 0.12
TGFB3-204ENST00000556285 SYNPO2Q9UMS6 1093 aa15.78■□□□□ 0.12
TGFB3-204ENST00000556285 DDX49Q9Y6V7 483 aaKnown RBP15.78■□□□□ 0.12
TGFB3-204ENST00000556285 PQBP1O60828 265 aaKnown RBP15.77■□□□□ 0.12
TGFB3-204ENST00000556285 SLC3A2P08195 630 aaKnown RBP15.77■□□□□ 0.12
TGFB3-204ENST00000556285 CLTBP09497 229 aa15.77■□□□□ 0.12
TGFB3-204ENST00000556285 FAAP100Q0VG06 881 aa15.77■□□□□ 0.12
TGFB3-204ENST00000556285 ACVR2BQ13705 512 aa15.77■□□□□ 0.12
TGFB3-204ENST00000556285 KCNA10Q16322 511 aa15.77■□□□□ 0.12
TGFB3-204ENST00000556285 KCTD1Q719H9 257 aa15.77■□□□□ 0.12
TGFB3-204ENST00000556285 ZNF467Q7Z7K2 595 aaPredicted RBP15.77■□□□□ 0.12
TGFB3-204ENST00000556285 CHST13Q8NET6 341 aa15.77■□□□□ 0.12
TGFB3-204ENST00000556285 MTMR7Q9Y216 660 aa15.77■□□□□ 0.12
TGFB3-204ENST00000556285 SOWAHBA6NEL2 793 aa15.76■□□□□ 0.11
TGFB3-204ENST00000556285 TSPY2A6NKD2 308 aa15.76■□□□□ 0.11
TGFB3-204ENST00000556285 STAT2P52630 851 aa15.76■□□□□ 0.11
TGFB3-204ENST00000556285 OAZ1P54368 228 aa15.76■□□□□ 0.11
TGFB3-204ENST00000556285 PDE1AP54750 535 aa15.76■□□□□ 0.11
TGFB3-204ENST00000556285 CCDC144BQ3MJ40 725 aa15.76■□□□□ 0.11
TGFB3-204ENST00000556285 STAG1Q8WVM7 1258 aa15.76■□□□□ 0.11
TGFB3-204ENST00000556285 GMCL1Q96IK5 515 aa15.76■□□□□ 0.11
TGFB3-204ENST00000556285 FAM227BQ96M60 508 aa15.76■□□□□ 0.11
TGFB3-204ENST00000556285 KATNBL1Q9H079 304 aa15.76■□□□□ 0.11
TGFB3-204ENST00000556285 STX8Q9UNK0 236 aa15.76■□□□□ 0.11
TGFB3-204ENST00000556285 REV3LO60673 3130 aa15.75■□□□□ 0.11
TGFB3-204ENST00000556285 ASTN1O14525 1302 aa15.75■□□□□ 0.11
TGFB3-204ENST00000556285 A0A0D9SFI3 127 aa15.75■□□□□ 0.11
TGFB3-204ENST00000556285 KIAA0355O15063 1070 aa15.75■□□□□ 0.11
TGFB3-204ENST00000556285 RANBP6O60518 1105 aaKnown RBP15.75■□□□□ 0.11
TGFB3-204ENST00000556285 DUSP11O75319 330 aaKnown RBP15.75■□□□□ 0.11
TGFB3-204ENST00000556285 SLC1A4P43007 532 aa15.75■□□□□ 0.11
TGFB3-204ENST00000556285 IKQ13123 557 aaPredicted RBP15.75■□□□□ 0.11
TGFB3-204ENST00000556285 MUM1L1Q5H9M0 696 aa15.75■□□□□ 0.11
TGFB3-204ENST00000556285 CCDC174Q6PII3 467 aa15.75■□□□□ 0.11
TGFB3-204ENST00000556285 ARMCX2Q7L311 632 aa15.75■□□□□ 0.11
TGFB3-204ENST00000556285 CCDC144CPQ8IYA2 1237 aa15.75■□□□□ 0.11
TGFB3-204ENST00000556285 FAM133AQ8N9E0 248 aa15.75■□□□□ 0.11
TGFB3-204ENST00000556285 EVI5LQ96CN4 794 aa15.75■□□□□ 0.11
TGFB3-204ENST00000556285 TSEN34Q9BSV6 310 aaKnown RBP15.75■□□□□ 0.11
TGFB3-204ENST00000556285 A1CFQ9NQ94 594 aaKnown RBP15.75■□□□□ 0.11
TGFB3-204ENST00000556285 RNF146Q9NTX7 359 aa15.75■□□□□ 0.11
TGFB3-204ENST00000556285 FBXO40Q9UH90 709 aa15.75■□□□□ 0.11
TGFB3-204ENST00000556285 ANAPC4Q9UJX5 808 aa15.75■□□□□ 0.11
TGFB3-204ENST00000556285 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.74■□□□□ 0.11
TGFB3-204ENST00000556285 CTAGE5O15320 804 aa15.74■□□□□ 0.11
TGFB3-204ENST00000556285 C6orf222P0C671 652 aaPredicted RBP15.74■□□□□ 0.11
TGFB3-204ENST00000556285 ALAS1P13196 640 aa15.74■□□□□ 0.11
TGFB3-204ENST00000556285 SMAD3P84022 425 aaKnown RBP15.74■□□□□ 0.11
TGFB3-204ENST00000556285 TTBK2Q6IQ55 1244 aa15.74■□□□□ 0.11
TGFB3-204ENST00000556285 RCSD1Q6JBY9 416 aa15.74■□□□□ 0.11
TGFB3-204ENST00000556285 FAM160B2Q86V87 743 aa15.74■□□□□ 0.11
TGFB3-204ENST00000556285 CHURC1Q8WUH1 139 aa15.74■□□□□ 0.11
TGFB3-204ENST00000556285 PURBQ96QR8 312 aaKnown RBP15.74■□□□□ 0.11
TGFB3-204ENST00000556285 ABHD16BQ9H3Z7 469 aa15.74■□□□□ 0.11
TGFB3-204ENST00000556285 ACAD9Q9H845 621 aa15.74■□□□□ 0.11
TGFB3-204ENST00000556285 STARD7Q9NQZ5 370 aa15.74■□□□□ 0.11
TGFB3-204ENST00000556285 TMEM39AQ9NV64 488 aa15.74■□□□□ 0.11
TGFB3-204ENST00000556285 PRR12Q9ULL5 1215 aa15.74■□□□□ 0.11
TGFB3-204ENST00000556285 CHD9Q3L8U1 2897 aa15.73■□□□□ 0.11
TGFB3-204ENST00000556285 SCN5AQ14524 2016 aa15.73■□□□□ 0.11
TGFB3-204ENST00000556285 ORC4O43929 436 aa15.73■□□□□ 0.11
TGFB3-204ENST00000556285 NOVP48745 357 aa15.73■□□□□ 0.11
TGFB3-204ENST00000556285 HDAC1Q13547 482 aaPredicted RBP15.73■□□□□ 0.11
TGFB3-204ENST00000556285 ALX1Q15699 326 aa15.73■□□□□ 0.11
TGFB3-204ENST00000556285 TMEM63BQ5T3F8 832 aa15.73■□□□□ 0.11
TGFB3-204ENST00000556285 C16orf59Q7L2K0 433 aa15.73■□□□□ 0.11
TGFB3-204ENST00000556285 ANKRD33Q7Z3H0 272 aa15.73■□□□□ 0.11
TGFB3-204ENST00000556285 ZNF589Q86UQ0 364 aaPredicted RBP15.73■□□□□ 0.11
TGFB3-204ENST00000556285 USP38Q8NB14 1042 aa15.73■□□□□ 0.11
TGFB3-204ENST00000556285 MAFAQ8NHW3 353 aaPredicted RBP15.73■□□□□ 0.11
TGFB3-204ENST00000556285 RNPC3Q96LT9 517 aaKnown RBP15.73■□□□□ 0.11
TGFB3-204ENST00000556285 TRERF1Q96PN7 1200 aa15.73■□□□□ 0.11
TGFB3-204ENST00000556285 UPF3AQ9H1J1 476 aaKnown RBP15.73■□□□□ 0.11
TGFB3-204ENST00000556285 HELLSQ9NRZ9 838 aa15.73■□□□□ 0.11
TGFB3-204ENST00000556285 ZBTB47Q9UFB7 747 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms