RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 ARTNQ5T4W7 220 aa5.97□□□□□ -1.45
ATXN3-237ENST00000556274 DUSP27Q5VZP5 1158 aa5.97□□□□□ -1.45
ATXN3-237ENST00000556274 KIF6Q6ZMV9 814 aa5.97□□□□□ -1.45
ATXN3-237ENST00000556274 RGS22Q8NE09 1264 aa5.97□□□□□ -1.45
ATXN3-237ENST00000556274 TSR2Q969E8 191 aaKnown RBP5.97□□□□□ -1.45
ATXN3-237ENST00000556274 TRIM56Q9BRZ2 755 aaKnown RBP5.97□□□□□ -1.45
ATXN3-237ENST00000556274 ZFP64Q9NPA5 681 aa5.97□□□□□ -1.45
ATXN3-237ENST00000556274 NARFQ9UHQ1 456 aa5.97□□□□□ -1.45
ATXN3-237ENST00000556274 SOS1Q07889 1333 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-237ENST00000556274 COL24A1Q17RW2 1714 aa5.96□□□□□ -1.45
ATXN3-237ENST00000556274 COL15A1P39059 1388 aa5.96□□□□□ -1.45
ATXN3-237ENST00000556274 A0A0G2JLW4 131 aa5.96□□□□□ -1.46
ATXN3-237ENST00000556274 CHL1O00533 1208 aa5.96□□□□□ -1.46
ATXN3-237ENST00000556274 DLGAP3O95886 979 aa5.96□□□□□ -1.46
ATXN3-237ENST00000556274 SERPINB2P05120 415 aa5.96□□□□□ -1.46
ATXN3-237ENST00000556274 IL6STP40189 918 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-237ENST00000556274 EIF5P55010 431 aaKnown RBP5.96□□□□□ -1.46
ATXN3-237ENST00000556274 NECAB3Q96P71 396 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-237ENST00000556274 ZC3H12CQ9C0D7 883 aaKnown RBP5.96□□□□□ -1.46
ATXN3-237ENST00000556274 NRSN2Q9GZP1 204 aa5.96□□□□□ -1.46
ATXN3-237ENST00000556274 RNF208Q9H0X6 261 aa5.96□□□□□ -1.46
ATXN3-237ENST00000556274 ANKRD36CQ5JPF3 1778 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 RBM47A0AV96 593 aaKnown RBP5.95□□□□□ -1.46
ATXN3-237ENST00000556274 CCER2I3L3R5 266 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 ENC1O14682 589 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 ECEL1O95672 775 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 GPTP24298 496 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 NFIXQ14938 502 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 CCDC85BQ15834 202 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-237ENST00000556274 HLFQ16534 295 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 EXOSC6Q5RKV6 272 aaKnown RBP5.95□□□□□ -1.46
ATXN3-237ENST00000556274 MEI1Q5TIA1 1274 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 TBC1D9BQ66K14 1250 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 TTLL7Q6ZT98 887 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 COPS6Q7L5N1 327 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 SULF2Q8IWU5 870 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 C8orf58Q8NAV2 365 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 NLGN2Q8NFZ4 835 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 ZNF622Q969S3 477 aaKnown RBP eCLIP5.95□□□□□ -1.46
ATXN3-237ENST00000556274 CEP41Q9BYV8 373 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 CBX8Q9HC52 389 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 RAD18Q9NS91 495 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 IFT57Q9NWB7 429 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 BABAM1Q9NWV8 329 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 NIP7Q9Y221 180 aaKnown RBP eCLIP5.95□□□□□ -1.46
ATXN3-237ENST00000556274 ZNF652Q9Y2D9 606 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 SAMM50Q9Y512 469 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 BCORQ6W2J9 1755 aa5.95□□□□□ -1.46
ATXN3-237ENST00000556274 CICQ96RK0 1608 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-237ENST00000556274 USP42Q9H9J4 1324 aaKnown RBP5.95□□□□□ -1.46
ATXN3-237ENST00000556274 ANKRD31Q8N7Z5 1873 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 MEGF11A6BM72 1044 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 SART1O43290 800 aaKnown RBP5.94□□□□□ -1.46
ATXN3-237ENST00000556274 CTSBP07858 339 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 CTSHP09668 335 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 NME2P22392 152 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 ARNTP27540 789 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 TM4SF1P30408 202 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 EXOSC9Q06265 439 aaKnown RBP5.94□□□□□ -1.46
ATXN3-237ENST00000556274 PDE3AQ14432 1141 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 TAF1CQ15572 869 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-237ENST00000556274 HP1BP3Q5SSJ5 553 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-237ENST00000556274 FDX2Q6P4F2 183 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 ARHGAP27Q6ZUM4 889 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 SV2BQ7L1I2 683 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 NBPF5PQ86XG9 351 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-237ENST00000556274 WDR63Q8IWG1 891 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 C12orf50Q8NA57 414 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-237ENST00000556274 XAGE3Q8WTP9 111 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 KCNB2Q92953 911 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 MEGF10Q96KG7 1140 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 STK31Q9BXU1 1019 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 EMILIN2Q9BXX0 1053 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 TMPRSS13Q9BYE2 586 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 CYP4F12Q9HCS2 524 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 CHPF2Q9P2E5 772 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 CD2APQ9Y5K6 639 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 KIF13BQ9NQT8 1826 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 SBF1O95248 1867 aa5.94□□□□□ -1.46
ATXN3-237ENST00000556274 MYH3P11055 1940 aa5.93□□□□□ -1.46
ATXN3-237ENST00000556274 ARFGEF2Q9Y6D5 1785 aa5.93□□□□□ -1.46
ATXN3-237ENST00000556274 SPEF2Q9C093 1822 aa5.93□□□□□ -1.46
ATXN3-237ENST00000556274 H0YIN7 160 aa5.93□□□□□ -1.46
ATXN3-237ENST00000556274 PAGE1O75459 146 aa5.93□□□□□ -1.46
ATXN3-237ENST00000556274 CAMTA2O94983 1202 aa5.93□□□□□ -1.46
ATXN3-237ENST00000556274 CELA3AP09093 270 aa5.93□□□□□ -1.46
ATXN3-237ENST00000556274 GSTP1P09211 210 aaKnown RBP5.93□□□□□ -1.46
ATXN3-237ENST00000556274 DPEP1P16444 411 aa5.93□□□□□ -1.46
ATXN3-237ENST00000556274 CHRNA5P30532 468 aa5.93□□□□□ -1.46
ATXN3-237ENST00000556274 ST5P78524 1137 aa5.93□□□□□ -1.46
ATXN3-237ENST00000556274 HNRNPUQ00839 825 aaKnown RBP eCLIP5.93□□□□□ -1.46
ATXN3-237ENST00000556274 DDR1Q08345 913 aa5.93□□□□□ -1.46
ATXN3-237ENST00000556274 RSPO4Q2I0M5 234 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-237ENST00000556274 PROSER3Q2NL68 480 aa5.93□□□□□ -1.46
ATXN3-237ENST00000556274 TWISTNBQ3B726 338 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-237ENST00000556274 CCDC30Q5VVM6 783 aa5.93□□□□□ -1.46
ATXN3-237ENST00000556274 ANKRD34AQ69YU3 496 aa5.93□□□□□ -1.46
ATXN3-237ENST00000556274 Q6ZS46 218 aa5.93□□□□□ -1.46
ATXN3-237ENST00000556274 C2CD5Q86YS7 1000 aa5.93□□□□□ -1.46
ATXN3-237ENST00000556274 DZIP1LQ8IYY4 767 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms