RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 OTUD7BQ6GQQ9 843 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 RCSD1Q6JBY9 416 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 C16orf86Q6ZW13 317 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 TEX11Q8IYF3 940 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 FAM177A1Q8N128 213 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-235ENST00000556082 FBXO41Q8TF61 875 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 TGFBRAP1Q8WUH2 860 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 ANP32BQ92688 251 aaKnown RBP9.58□□□□□ -0.88
ATXN3-235ENST00000556082 MYL10Q9BUA6 226 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 PANK2Q9BZ23 570 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 NUP62CLQ9H1M0 184 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 CLSTN2Q9H4D0 955 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 PGPEP1Q9NXJ5 209 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 TCHHQ07283 1943 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 MYH13Q9UKX3 1938 aa9.58□□□□□ -0.88
ATXN3-235ENST00000556082 TSPY2A6NKD2 308 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 KIF28PB7ZC32 967 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 SPTLC2O15270 562 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 PPFIA3O75145 1194 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 CAVIN2O95810 425 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 MMP1P03956 469 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 POLR3DP05423 398 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-235ENST00000556082 FSHRP23945 695 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 KIF5BP33176 963 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 GNAQP50148 359 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 TFAP4Q01664 338 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 AKAP17AQ02040 695 aaKnown RBP9.57□□□□□ -0.88
ATXN3-235ENST00000556082 PTK2Q05397 1052 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 MAP3K11Q16584 847 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 STRIP1Q5VSL9 837 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 TMTC3Q6ZXV5 915 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 CCDC144CPQ8IYA2 1237 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 ZNF444Q8N0Y2 327 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-235ENST00000556082 LINC00528Q8N1L1 170 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 SUPT20HQ8NEM7 779 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 ENGASEQ8NFI3 743 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 NEDD1Q8NHV4 660 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 CTCFLQ8NI51 663 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-235ENST00000556082 NUP133Q8WUM0 1156 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 ZNF622Q969S3 477 aaKnown RBP eCLIP9.57□□□□□ -0.88
ATXN3-235ENST00000556082 AIFM3Q96NN9 605 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 LZTS2Q9BRK4 669 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 ARHGAP9Q9BRR9 750 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 MKNK2Q9HBH9 465 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 IL17RBQ9NRM6 502 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 DACT1Q9NYF0 836 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 DAGLAQ9Y4D2 1042 aa9.57□□□□□ -0.88
ATXN3-235ENST00000556082 FLT1P17948 1338 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 FAM237AA0A1B0GTK4 181 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 PPP6R2O75170 966 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 CCDC192P0DO97 292 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 VSIG8P0DPA2 414 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 BMP2P12643 396 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 XBP1P17861 261 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 RASA1P20936 1047 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 CMA1P23946 247 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 SMARCA1P28370 1054 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 GMPRP36959 345 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 BAG6P46379 1132 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 ME1P48163 572 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 FAM160A1Q05DH4 1040 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 DHX9Q08211 1270 aaKnown RBP9.56□□□□□ -0.88
ATXN3-235ENST00000556082 STK38Q15208 465 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 PKN1Q16512 942 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 FAM47AQ5JRC9 791 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 MSL1Q68DK7 614 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 NOSTRINQ8IVI9 506 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 MAPKAPK5Q8IW41 473 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 CCAR1Q8IX12 1150 aaKnown RBP9.56□□□□□ -0.88
ATXN3-235ENST00000556082 STK11IPQ8N1F8 1099 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 CERS5Q8N5B7 392 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 JMYQ8N9B5 988 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 BICD2Q8TD16 824 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 PDLIM2Q96JY6 352 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 FAM117AQ9C073 453 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 GOPCQ9HD26 462 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 GJB4Q9NTQ9 266 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 PCDHA7Q9UN72 937 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 CHD4Q14839 1912 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 QSER1Q2KHR3 1735 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 MYO3BQ8WXR4 1341 aa9.56□□□□□ -0.88
ATXN3-235ENST00000556082 TSPY3P0CV98 308 aa9.55□□□□□ -0.88
ATXN3-235ENST00000556082 TSPY8P0CW00 308 aa9.55□□□□□ -0.88
ATXN3-235ENST00000556082 GUCY1A2P33402 732 aa9.55□□□□□ -0.88
ATXN3-235ENST00000556082 CDK8P49336 464 aa9.55□□□□□ -0.88
ATXN3-235ENST00000556082 PLCD1P51178 756 aa9.55□□□□□ -0.88
ATXN3-235ENST00000556082 CEBPZQ03701 1054 aaKnown RBP9.55□□□□□ -0.88
ATXN3-235ENST00000556082 SF3B2Q13435 895 aaKnown RBP9.55□□□□□ -0.88
ATXN3-235ENST00000556082 SNW1Q13573 536 aaKnown RBP9.55□□□□□ -0.88
ATXN3-235ENST00000556082 GRM4Q14833 912 aa9.55□□□□□ -0.88
ATXN3-235ENST00000556082 PTPAQ15257 358 aa9.55□□□□□ -0.88
ATXN3-235ENST00000556082 SF3A1Q15459 793 aaKnown RBP9.55□□□□□ -0.88
ATXN3-235ENST00000556082 HS1BP3Q53T59 392 aa9.55□□□□□ -0.88
ATXN3-235ENST00000556082 RILPL1Q5EBL4 403 aa9.55□□□□□ -0.88
ATXN3-235ENST00000556082 AXDND1Q5T1B0 1012 aaPredicted RBP9.55□□□□□ -0.88
ATXN3-235ENST00000556082 CCDC73Q6ZRK6 1079 aa9.55□□□□□ -0.88
ATXN3-235ENST00000556082 ZBTB33Q86T24 672 aa9.55□□□□□ -0.88
ATXN3-235ENST00000556082 TEKT1Q969V4 418 aa9.55□□□□□ -0.88
ATXN3-235ENST00000556082 DYNLL2Q96FJ2 89 aa9.55□□□□□ -0.88
ATXN3-235ENST00000556082 ZDHHC15Q96MV8 337 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms