RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 GSG1L2A8MUP6 293 aa8□□□□□ -1.13
PSEN1-216ENST00000556066 WDR46O15213 610 aaKnown RBP8□□□□□ -1.13
PSEN1-216ENST00000556066 GPAA1O43292 621 aa8□□□□□ -1.13
PSEN1-216ENST00000556066 SYN1P17600 705 aa8□□□□□ -1.13
PSEN1-216ENST00000556066 ADORA2AP29274 412 aa8□□□□□ -1.13
PSEN1-216ENST00000556066 TDO2P48775 406 aa8□□□□□ -1.13
PSEN1-216ENST00000556066 GRB14Q14449 540 aa8□□□□□ -1.13
PSEN1-216ENST00000556066 LRRFIP1Q32MZ4 808 aaKnown RBP8□□□□□ -1.13
PSEN1-216ENST00000556066 MB21D1Q8N884 522 aa8□□□□□ -1.13
PSEN1-216ENST00000556066 GOPCQ9HD26 462 aa8□□□□□ -1.13
PSEN1-216ENST00000556066 FBXO28Q9NVF7 368 aa8□□□□□ -1.13
PSEN1-216ENST00000556066 PCDHB15Q9Y5E8 787 aa8□□□□□ -1.13
PSEN1-216ENST00000556066 ZNF236Q9UL36 1845 aa7.99□□□□□ -1.13
PSEN1-216ENST00000556066 A0A1W2PPC1 479 aa7.99□□□□□ -1.13
PSEN1-216ENST00000556066 M0R2C6 588 aa7.99□□□□□ -1.13
PSEN1-216ENST00000556066 ERC2O15083 957 aa7.99□□□□□ -1.13
PSEN1-216ENST00000556066 STRNO43815 780 aa7.99□□□□□ -1.13
PSEN1-216ENST00000556066 ZFYP08048 801 aaPredicted RBP7.99□□□□□ -1.13
PSEN1-216ENST00000556066 HOXC6P09630 235 aa7.99□□□□□ -1.13
PSEN1-216ENST00000556066 FAM83BQ5T0W9 1011 aa7.99□□□□□ -1.13
PSEN1-216ENST00000556066 ANO1Q5XXA6 986 aa7.99□□□□□ -1.13
PSEN1-216ENST00000556066 TRAF7Q6Q0C0 670 aa7.99□□□□□ -1.13
PSEN1-216ENST00000556066 TTC13Q8NBP0 860 aa7.99□□□□□ -1.13
PSEN1-216ENST00000556066 SHCBP1Q8NEM2 672 aa7.99□□□□□ -1.13
PSEN1-216ENST00000556066 OTUD7AQ8TE49 926 aaPredicted RBP7.99□□□□□ -1.13
PSEN1-216ENST00000556066 NUP88Q99567 741 aaPredicted RBP7.99□□□□□ -1.13
PSEN1-216ENST00000556066 FSD1Q9BTV5 496 aa7.99□□□□□ -1.13
PSEN1-216ENST00000556066 MROH8Q9H579 483 aa7.99□□□□□ -1.13
PSEN1-216ENST00000556066 SLC5A4Q9NY91 659 aa7.99□□□□□ -1.13
PSEN1-216ENST00000556066 DDX20Q9UHI6 824 aaKnown RBP7.99□□□□□ -1.13
PSEN1-216ENST00000556066 SUPT16HQ9Y5B9 1047 aaKnown RBP7.99□□□□□ -1.13
PSEN1-216ENST00000556066 PFASO15067 1338 aa7.99□□□□□ -1.13
PSEN1-216ENST00000556066 TTC41PQ6P2S7 1318 aa7.99□□□□□ -1.13
PSEN1-216ENST00000556066 SPTBN5Q9NRC6 3674 aaKnown RBP7.99□□□□□ -1.13
PSEN1-216ENST00000556066 GFRA3O60609 400 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 MSCO60682 206 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 COBLO75128 1261 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 PRDM1O75626 825 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 FCER1AP12319 257 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 GNAT2P19087 354 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 MX1P20591 662 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 COL9A1P20849 921 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 RASA1P20936 1047 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 SLC4A3P48751 1232 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 RRP1P56182 461 aaKnown RBP7.98□□□□□ -1.13
PSEN1-216ENST00000556066 PRSS12P56730 875 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 TMEM132BQ14DG7 1078 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 SBK1Q52WX2 424 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 ANKRD45Q5TZF3 282 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 GIMAP6Q6P9H5 292 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 ZNF444Q8N0Y2 327 aaPredicted RBP7.98□□□□□ -1.13
PSEN1-216ENST00000556066 TRPV1Q8NER1 839 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 CRBNQ96SW2 442 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 SEC62Q99442 399 aaKnown RBP7.98□□□□□ -1.13
PSEN1-216ENST00000556066 GDF15Q99988 308 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.98□□□□□ -1.13
PSEN1-216ENST00000556066 NACAP1Q9BZK3 213 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 SENP6Q9GZR1 1112 aaPredicted RBP7.98□□□□□ -1.13
PSEN1-216ENST00000556066 ZNF287Q9HBT7 754 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 EPB41L4AQ9HCS5 686 aaPredicted RBP7.98□□□□□ -1.13
PSEN1-216ENST00000556066 ISY1Q9ULR0 285 aaKnown RBP7.98□□□□□ -1.13
PSEN1-216ENST00000556066 VCANP13611 3396 aa7.98□□□□□ -1.13
PSEN1-216ENST00000556066 MCM3APO60318 1980 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 PATL2C9JE40 543 aaKnown RBP7.97□□□□□ -1.13
PSEN1-216ENST00000556066 F5H6K3 240 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 VWA5AO00534 786 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 SLC25A27O95847 323 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 PGK2P07205 417 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 COL6A1P12109 1028 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 CYBAP13498 195 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 STAT3P40763 770 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 KLRC3Q07444 240 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 PDE4DQ08499 809 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 KCTD2Q14681 263 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 LRRC26Q2I0M4 334 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 PRAMEF19Q5SWL8 479 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 GJC2Q5T442 439 aaPredicted RBP7.97□□□□□ -1.13
PSEN1-216ENST00000556066 OLFML2BQ68BL8 750 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 PADI6Q6TGC4 694 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 Q7L0L9 218 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 IFNL3Q8IZI9 196 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 DEFB123Q8N688 67 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 PI4K2BQ8TCG2 481 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 CHMP4CQ96CF2 233 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 ZFRQ96KR1 1074 aaKnown RBP7.97□□□□□ -1.13
PSEN1-216ENST00000556066 MMP19Q99542 508 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 SLF1Q9BQI6 1058 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 NAPBQ9H115 298 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 CLIP2Q9UDT6 1046 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 PPP1R9AQ9ULJ8 1098 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 CTDP1Q9Y5B0 961 aaPredicted RBP7.97□□□□□ -1.13
PSEN1-216ENST00000556066 ROBO3Q96MS0 1386 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 DNAH12Q6ZR08 3092 aa7.97□□□□□ -1.13
PSEN1-216ENST00000556066 LAMA2P24043 3122 aaKnown RBP7.96□□□□□ -1.13
PSEN1-216ENST00000556066 KBTBD13C9JR72 458 aa7.96□□□□□ -1.14
PSEN1-216ENST00000556066 NDUFB10O96000 172 aa7.96□□□□□ -1.14
PSEN1-216ENST00000556066 SLC3A2P08195 630 aaKnown RBP7.96□□□□□ -1.14
PSEN1-216ENST00000556066 TSPY3P0CV98 308 aa7.96□□□□□ -1.14
PSEN1-216ENST00000556066 TSPY8P0CW00 308 aa7.96□□□□□ -1.14
PSEN1-216ENST00000556066 BMP8BP34820 402 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms