RNA–Protein interactions for RNA: ENST00000555370.5

IFT43-210, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-210ENST00000555370 GUCD1Q96NT3 240 aa13.38□□□□□ -0.27
IFT43-210ENST00000555370 GOPCQ9HD26 462 aa13.38□□□□□ -0.27
IFT43-210ENST00000555370 GPCPD1Q9NPB8 672 aa13.38□□□□□ -0.27
IFT43-210ENST00000555370 GJB4Q9NTQ9 266 aa13.38□□□□□ -0.27
IFT43-210ENST00000555370 TMX2Q9Y320 296 aa13.38□□□□□ -0.27
IFT43-210ENST00000555370 A0A1W2PRG0 241 aa13.37□□□□□ -0.27
IFT43-210ENST00000555370 F5H6K3 240 aa13.37□□□□□ -0.27
IFT43-210ENST00000555370 RAD21O60216 631 aa13.37□□□□□ -0.27
IFT43-210ENST00000555370 NDUFB10O96000 172 aa13.37□□□□□ -0.27
IFT43-210ENST00000555370 NCLP19338 710 aaKnown RBP13.37□□□□□ -0.27
IFT43-210ENST00000555370 FKBP1BP68106 108 aa13.37□□□□□ -0.27
IFT43-210ENST00000555370 KRT85P78386 507 aa13.37□□□□□ -0.27
IFT43-210ENST00000555370 DNM1Q05193 864 aaKnown RBP13.37□□□□□ -0.27
IFT43-210ENST00000555370 KLRC3Q07444 240 aa13.37□□□□□ -0.27
IFT43-210ENST00000555370 GNL2Q13823 731 aaKnown RBP13.37□□□□□ -0.27
IFT43-210ENST00000555370 LRIT3Q3SXY7 679 aa13.37□□□□□ -0.27
IFT43-210ENST00000555370 PRAMEF18Q5VWM3 479 aa13.37□□□□□ -0.27
IFT43-210ENST00000555370 FAM177A1Q8N128 213 aaPredicted RBP13.37□□□□□ -0.27
IFT43-210ENST00000555370 SHISA4Q96DD7 197 aa13.37□□□□□ -0.27
IFT43-210ENST00000555370 RIOX1Q9H6W3 641 aa13.37□□□□□ -0.27
IFT43-210ENST00000555370 SH3GLB2Q9NR46 395 aa13.37□□□□□ -0.27
IFT43-210ENST00000555370 VPS54Q9P1Q0 977 aa13.37□□□□□ -0.27
IFT43-210ENST00000555370 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.37□□□□□ -0.27
IFT43-210ENST00000555370 SEC63Q9UGP8 760 aaKnown RBP13.37□□□□□ -0.27
IFT43-210ENST00000555370 CNPY2Q9Y2B0 182 aa13.37□□□□□ -0.27
IFT43-210ENST00000555370 LOC285556D6RIA3 1793 aa13.37□□□□□ -0.27
IFT43-210ENST00000555370 KIF28PB7ZC32 967 aa13.36□□□□□ -0.27
IFT43-210ENST00000555370 hCG_1984214I3L0E3 225 aa13.36□□□□□ -0.27
IFT43-210ENST00000555370 ALDH1A1P00352 501 aa13.36□□□□□ -0.27
IFT43-210ENST00000555370 INPP5BP32019 993 aa13.36□□□□□ -0.27
IFT43-210ENST00000555370 CSPP1Q1MSJ5 1256 aa13.36□□□□□ -0.27
IFT43-210ENST00000555370 ATL3Q6DD88 541 aa13.36□□□□□ -0.27
IFT43-210ENST00000555370 KCTD1Q719H9 257 aa13.36□□□□□ -0.27
IFT43-210ENST00000555370 SCYL3Q8IZE3 742 aa13.36□□□□□ -0.27
IFT43-210ENST00000555370 ZNF713Q8N859 430 aaPredicted RBP13.36□□□□□ -0.27
IFT43-210ENST00000555370 TMEM87AQ8NBN3 555 aa13.36□□□□□ -0.27
IFT43-210ENST00000555370 CCDC148Q8NFR7 591 aa13.36□□□□□ -0.27
IFT43-210ENST00000555370 ACER1Q8TDN7 264 aa13.36□□□□□ -0.27
IFT43-210ENST00000555370 PIBF1Q8WXW3 757 aa13.36□□□□□ -0.27
IFT43-210ENST00000555370 ZNF396Q96N95 335 aaPredicted RBP13.36□□□□□ -0.27
IFT43-210ENST00000555370 WRNIP1Q96S55 665 aa13.36□□□□□ -0.27
IFT43-210ENST00000555370 PHF20Q9BVI0 1012 aa13.36□□□□□ -0.27
IFT43-210ENST00000555370 UBA5Q9GZZ9 404 aa13.36□□□□□ -0.27
IFT43-210ENST00000555370 CPVLQ9H3G5 476 aa13.36□□□□□ -0.27
IFT43-210ENST00000555370 VCPKMTQ9H867 229 aa13.36□□□□□ -0.27
IFT43-210ENST00000555370 BRMS1Q9HCU9 246 aa13.36□□□□□ -0.27
IFT43-210ENST00000555370 ISY1Q9ULR0 285 aaKnown RBP13.36□□□□□ -0.27
IFT43-210ENST00000555370 KCNJ14Q9UNX9 436 aa13.36□□□□□ -0.27
IFT43-210ENST00000555370 PTCH2Q9Y6C5 1203 aa13.36□□□□□ -0.27
IFT43-210ENST00000555370 COL11A1P12107 1806 aaPredicted RBP13.35□□□□□ -0.27
IFT43-210ENST00000555370 FIBPO43427 364 aa13.35□□□□□ -0.27
IFT43-210ENST00000555370 BMP3P12645 472 aa13.35□□□□□ -0.27
IFT43-210ENST00000555370 U2AF2P26368 475 aaKnown RBP eCLIP13.35□□□□□ -0.27
IFT43-210ENST00000555370 KRT2P35908 639 aa13.35□□□□□ -0.27
IFT43-210ENST00000555370 NOL9Q5SY16 702 aaKnown RBP13.35□□□□□ -0.27
IFT43-210ENST00000555370 TTBK2Q6IQ55 1244 aa13.35□□□□□ -0.27
IFT43-210ENST00000555370 FAM173BQ6P4H8 233 aa13.35□□□□□ -0.27
IFT43-210ENST00000555370 DIS3L2Q8IYB7 885 aaKnown RBP13.35□□□□□ -0.27
IFT43-210ENST00000555370 GPKOWQ92917 476 aaPredicted RBP eCLIP13.35□□□□□ -0.27
IFT43-210ENST00000555370 PIGSQ96S52 555 aa13.35□□□□□ -0.27
IFT43-210ENST00000555370 FEZ1Q99689 392 aa13.35□□□□□ -0.27
IFT43-210ENST00000555370 FOXP1Q9H334 677 aaPredicted RBP13.35□□□□□ -0.27
IFT43-210ENST00000555370 STXBP3O00186 592 aa13.34□□□□□ -0.27
IFT43-210ENST00000555370 CALML3P27482 149 aa13.34□□□□□ -0.27
IFT43-210ENST00000555370 NF2P35240 595 aa13.34□□□□□ -0.27
IFT43-210ENST00000555370 CAP1Q01518 475 aa13.34□□□□□ -0.27
IFT43-210ENST00000555370 MYSM1Q5VVJ2 828 aa13.34□□□□□ -0.27
IFT43-210ENST00000555370 WWC2Q6AWC2 1192 aa13.34□□□□□ -0.27
IFT43-210ENST00000555370 HEATR3Q7Z4Q2 680 aa13.34□□□□□ -0.27
IFT43-210ENST00000555370 CCDC84Q86UT8 332 aaPredicted RBP13.34□□□□□ -0.27
IFT43-210ENST00000555370 HOMER1Q86YM7 354 aa13.34□□□□□ -0.27
IFT43-210ENST00000555370 ADGRF4Q8IZF3 695 aa13.34□□□□□ -0.27
IFT43-210ENST00000555370 CCDC12Q8WUD4 166 aaPredicted RBP13.34□□□□□ -0.27
IFT43-210ENST00000555370 SCAND2PQ9GZW5 306 aaPredicted RBP13.34□□□□□ -0.27
IFT43-210ENST00000555370 JMJD4Q9H9V9 463 aa13.34□□□□□ -0.27
IFT43-210ENST00000555370 AS3MTQ9HBK9 375 aa13.34□□□□□ -0.27
IFT43-210ENST00000555370 VAT1LQ9HCJ6 419 aa13.34□□□□□ -0.27
IFT43-210ENST00000555370 PICK1Q9NRD5 415 aa13.34□□□□□ -0.27
IFT43-210ENST00000555370 LMBRD1Q9NUN5 540 aa13.34□□□□□ -0.27
IFT43-210ENST00000555370 BARHL2Q9NY43 387 aa13.34□□□□□ -0.27
IFT43-210ENST00000555370 CFAP45Q9UL16 551 aa13.34□□□□□ -0.27
IFT43-210ENST00000555370 RLFQ13129 1914 aa13.34□□□□□ -0.27
IFT43-210ENST00000555370 BTBD18B2RXH4 712 aa13.33□□□□□ -0.28
IFT43-210ENST00000555370 TMEM232C9JQI7 657 aa13.33□□□□□ -0.28
IFT43-210ENST00000555370 EVI5O60447 810 aa13.33□□□□□ -0.28
IFT43-210ENST00000555370 PRPF40AO75400 957 aaKnown RBP13.33□□□□□ -0.28
IFT43-210ENST00000555370 BMP8BP34820 402 aa13.33□□□□□ -0.28
IFT43-210ENST00000555370 SLC16A2P36021 539 aa13.33□□□□□ -0.28
IFT43-210ENST00000555370 NLRP5P59047 1200 aa13.33□□□□□ -0.28
IFT43-210ENST00000555370 GALNT17Q6IS24 598 aa13.33□□□□□ -0.28
IFT43-210ENST00000555370 BTNL9Q6UXG8 535 aa13.33□□□□□ -0.28
IFT43-210ENST00000555370 ALYREFQ86V81 257 aaKnown RBP13.33□□□□□ -0.28
IFT43-210ENST00000555370 NOSTRINQ8IVI9 506 aa13.33□□□□□ -0.28
IFT43-210ENST00000555370 DAGLBQ8NCG7 672 aa13.33□□□□□ -0.28
IFT43-210ENST00000555370 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.33□□□□□ -0.28
IFT43-210ENST00000555370 ZKSCAN4Q969J2 545 aaPredicted RBP13.33□□□□□ -0.28
IFT43-210ENST00000555370 MTMR8Q96EF0 704 aa13.33□□□□□ -0.28
IFT43-210ENST00000555370 NUP88Q99567 741 aaPredicted RBP13.33□□□□□ -0.28
IFT43-210ENST00000555370 WDR18Q9BV38 432 aa13.33□□□□□ -0.28
IFT43-210ENST00000555370 KIAA1683Q9H0B3 1180 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms