RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-231	ENST00000554994	ATP6V0A2	Q9Y487	856 aa		5.87	□□□□□ -1.47
ATXN3-231	ENST00000554994	RTL9	Q8NET4	1388 aa		5.87	□□□□□ -1.47
ATXN3-231	ENST00000554994	PRUNE2	Q8WUY3	3088 aa		5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	UBN2	Q6ZU65	1347 aa		5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	SH3TC1	Q8TE82	1336 aa		5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	ZBTB42	B2RXF5	422 aa		5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	IRS4	O14654	1257 aa	Predicted RBP	5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	CCL5	P13501	91 aa		5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	BMP8B	P34820	402 aa		5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	FLII	Q13045	1269 aa		5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	HIF1A	Q16665	826 aa		5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	CWF19L2	Q2TBE0	894 aa	Known RBP	5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	DHX32	Q7L7V1	743 aa	Known RBP	5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	TSEN2	Q8NCE0	465 aa	Known RBP	5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	MYLIP	Q8WY64	445 aa		5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	FRAT1	Q92837	279 aa	Predicted RBP	5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	CLMN	Q96JQ2	1002 aa		5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	CRAMP1	Q96RY5	1269 aa		5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	MRPL18	Q9H0U6	180 aa	Known RBP	5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	VPS33B	Q9H267	617 aa		5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	SMC4	Q9NTJ3	1288 aa		5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	C9orf78	Q9NZ63	289 aa	Predicted RBP	5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	LAMA2	P24043	3122 aa	Known RBP	5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	MUC3A	Q02505	3323 aa		5.86	□□□□□ -1.47
ATXN3-231	ENST00000554994	DUOX1	Q9NRD9	1551 aa		5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	ABCC4	O15439	1325 aa		5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994		F8W735	103 aa	Predicted RBP	5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	NTSR2	O95665	410 aa		5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	EIF2AK2	P19525	551 aa	Known RBP	5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	TARS	P26639	723 aa	Known RBP	5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	GJA8	P48165	433 aa		5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	GDF6	Q6KF10	455 aa	Predicted RBP	5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	UBE3B	Q7Z3V4	1068 aa		5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	LRP10	Q7Z4F1	713 aa		5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	USP38	Q8NB14	1042 aa		5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	CCDC191	Q8NCU4	936 aa		5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	DNAAF4	Q8WXU2	420 aa		5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	SSH1	Q8WYL5	1049 aa		5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	WNK4	Q96J92	1243 aa		5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	ISCA1	Q9BUE6	129 aa		5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	KRTAP4-9	Q9BYQ8	210 aa		5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	RNF208	Q9H0X6	261 aa		5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	ZFAT	Q9P243	1243 aa		5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	STOML1	Q9UBI4	398 aa		5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	ANGEL1	Q9UNK9	670 aa	Known RBP	5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	ALPK3	Q96L96	1907 aa		5.85	□□□□□ -1.47
ATXN3-231	ENST00000554994	MUC6	Q6W4X9	2439 aa		5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	GSC2	O15499	205 aa		5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	ECE2	O60344	883 aa		5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	ADAMTS4	O75173	837 aa		5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	GJB1	P08034	283 aa		5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	RARA	P10276	462 aa		5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	HSP90B1	P14625	803 aa	Known RBP	5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	RPS12	P25398	132 aa	Known RBP	5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	NF2	P35240	595 aa		5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	ATP1A2	P50993	1020 aa		5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	CLDN10	P78369	228 aa		5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	SLC10A5	Q5PT55	438 aa		5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	ARMC9	Q7Z3E5	817 aa		5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	DIS3L	Q8TF46	1054 aa	Known RBP	5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	U2AF1L4	Q8WU68	220 aa	Known RBP	5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	SCG3	Q8WXD2	468 aa	Known RBP	5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	PTPN18	Q99952	460 aa		5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	BIN2	Q9UBW5	565 aa	Predicted RBP	5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	NOB1	Q9ULX3	412 aa	Known RBP	5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	RBM19	Q9Y4C8	960 aa	Known RBP	5.84	□□□□□ -1.47
ATXN3-231	ENST00000554994	AK9	Q5TCS8	1911 aa		5.84	□□□□□ -1.48
ATXN3-231	ENST00000554994	ZNF521	Q96K83	1311 aa		5.83	□□□□□ -1.48
ATXN3-231	ENST00000554994	PLIN1	O60240	522 aa		5.83	□□□□□ -1.48
ATXN3-231	ENST00000554994	PDE8A	O60658	829 aa		5.83	□□□□□ -1.48
ATXN3-231	ENST00000554994	BCAR3	O75815	825 aa		5.83	□□□□□ -1.48
ATXN3-231	ENST00000554994	SASH3	O75995	380 aa		5.83	□□□□□ -1.48
ATXN3-231	ENST00000554994	PCCA	P05165	728 aa	Predicted RBP	5.83	□□□□□ -1.48
ATXN3-231	ENST00000554994	IGKV5-2	P06315	115 aa		5.83	□□□□□ -1.48
ATXN3-231	ENST00000554994	FOSL2	P15408	326 aa		5.83	□□□□□ -1.48
ATXN3-231	ENST00000554994	EPB42	P16452	691 aa		5.83	□□□□□ -1.48
ATXN3-231	ENST00000554994	ARHGEF6	Q15052	776 aa		5.83	□□□□□ -1.48
ATXN3-231	ENST00000554994	TAF1C	Q15572	869 aa	Predicted RBP	5.83	□□□□□ -1.48
ATXN3-231	ENST00000554994	NBPF9	Q3BBW0	867 aa		5.83	□□□□□ -1.48
ATXN3-231	ENST00000554994	CCDC152	Q4G0S7	254 aa		5.83	□□□□□ -1.48
ATXN3-231	ENST00000554994	TAF7L	Q5H9L4	462 aa		5.83	□□□□□ -1.48
ATXN3-231	ENST00000554994	LDLRAD1	Q5T700	205 aa		5.83	□□□□□ -1.48
ATXN3-231	ENST00000554994	ADAMTS19	Q8TE59	1207 aa		5.83	□□□□□ -1.48
ATXN3-231	ENST00000554994	ZNF594	Q96JF6	807 aa	Predicted RBP	5.83	□□□□□ -1.48
ATXN3-231	ENST00000554994	SRCIN1	Q9C0H9	1055 aa		5.83	□□□□□ -1.48
ATXN3-231	ENST00000554994	SEC31B	Q9NQW1	1179 aa		5.83	□□□□□ -1.48
ATXN3-231	ENST00000554994	MYH13	Q9UKX3	1938 aa		5.83	□□□□□ -1.48
ATXN3-231	ENST00000554994	TGFBR3L	H3BV60	316 aa		5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	IPO8	O15397	1037 aa	Known RBP	5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	BBOX1	O75936	387 aa		5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	GRN	P28799	593 aa	Known RBP	5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	GRIK1	P39086	918 aa		5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	INHBE	P58166	350 aa		5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	ZNF280A	P59817	542 aa	Predicted RBP	5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	RPS8	P62241	208 aa	Known RBP	5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	GCKR	Q14397	625 aa		5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	ALDH1L2	Q3SY69	923 aa		5.82	□□□□□ -1.48
ATXN3-231	ENST00000554994	OTUD7B	Q6GQQ9	843 aa		5.82	□□□□□ -1.48

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