RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 CLIC4Q9Y696 253 aa12.47□□□□□ -0.41
NUMB-212ENST00000554546 C5orf60A6NFR6 353 aa12.47□□□□□ -0.41
NUMB-212ENST00000554546 EIF3FO00303 357 aaPredicted RBP12.47□□□□□ -0.41
NUMB-212ENST00000554546 MFAP3LO75121 409 aa12.47□□□□□ -0.41
NUMB-212ENST00000554546 GSTA1P08263 222 aa12.47□□□□□ -0.41
NUMB-212ENST00000554546 OXCT1P55809 520 aa12.47□□□□□ -0.41
NUMB-212ENST00000554546 LACTBP83111 547 aaPredicted RBP12.47□□□□□ -0.41
NUMB-212ENST00000554546 MCL1Q07820 350 aa12.47□□□□□ -0.41
NUMB-212ENST00000554546 SEPT2Q15019 361 aa12.47□□□□□ -0.41
NUMB-212ENST00000554546 POSTNQ15063 836 aa12.47□□□□□ -0.41
NUMB-212ENST00000554546 APBB1IPQ7Z5R6 666 aaPredicted RBP12.47□□□□□ -0.41
NUMB-212ENST00000554546 TRIM50Q86XT4 487 aa12.47□□□□□ -0.41
NUMB-212ENST00000554546 CLMNQ96JQ2 1002 aa12.47□□□□□ -0.41
NUMB-212ENST00000554546 PHACTR3Q96KR7 559 aa12.47□□□□□ -0.41
NUMB-212ENST00000554546 NR1H4Q96RI1 486 aaPredicted RBP12.47□□□□□ -0.41
NUMB-212ENST00000554546 SAMSN1Q9NSI8 373 aaKnown RBP12.47□□□□□ -0.41
NUMB-212ENST00000554546 GGT7Q9UJ14 662 aa12.47□□□□□ -0.41
NUMB-212ENST00000554546 HOXD12P35452 270 aa12.47□□□□□ -0.41
NUMB-212ENST00000554546 SMUG1Q53HV7 270 aa12.47□□□□□ -0.41
NUMB-212ENST00000554546 DZIP1Q86YF9 867 aaKnown RBP12.47□□□□□ -0.41
NUMB-212ENST00000554546 STAG2Q8N3U4 1231 aa12.47□□□□□ -0.41
NUMB-212ENST00000554546 ANKRD24Q8TF21 1146 aa12.47□□□□□ -0.41
NUMB-212ENST00000554546 STIM2Q9P246 746 aa12.47□□□□□ -0.41
NUMB-212ENST00000554546 SCOCQ9UIL1 159 aa12.47□□□□□ -0.41
NUMB-212ENST00000554546 ITM2BQ9Y287 266 aa12.47□□□□□ -0.41
NUMB-212ENST00000554546 SYNJ2O15056 1496 aa12.46□□□□□ -0.41
NUMB-212ENST00000554546 GOLGA6L10A0A0M3HER8 536 aa12.46□□□□□ -0.41
NUMB-212ENST00000554546 DYTNA2CJ06 578 aa12.46□□□□□ -0.41
NUMB-212ENST00000554546 POLR3DP05423 398 aaPredicted RBP12.46□□□□□ -0.41
NUMB-212ENST00000554546 HMOX1P09601 288 aa12.46□□□□□ -0.41
NUMB-212ENST00000554546 FAM153BP0C7A2 387 aa12.46□□□□□ -0.41
NUMB-212ENST00000554546 HOXD11P31277 338 aaPredicted RBP12.46□□□□□ -0.41
NUMB-212ENST00000554546 MLH1P40692 756 aa12.46□□□□□ -0.41
NUMB-212ENST00000554546 HNRNPMP52272 730 aaKnown RBP eCLIP12.46□□□□□ -0.41
NUMB-212ENST00000554546 RHBDL3P58872 404 aa12.46□□□□□ -0.41
NUMB-212ENST00000554546 ERVK-24P63145 666 aa12.46□□□□□ -0.41
NUMB-212ENST00000554546 FAM153CQ494X1 144 aa12.46□□□□□ -0.41
NUMB-212ENST00000554546 MIGA2Q7L4E1 593 aa12.46□□□□□ -0.41
NUMB-212ENST00000554546 CCNJLQ8IV13 435 aa12.46□□□□□ -0.41
NUMB-212ENST00000554546 UCMAQ8WVF2 138 aa12.46□□□□□ -0.41
NUMB-212ENST00000554546 IFT81Q8WYA0 676 aa12.46□□□□□ -0.41
NUMB-212ENST00000554546 GBP5Q96PP8 586 aa12.46□□□□□ -0.41
NUMB-212ENST00000554546 PHAXQ9H814 394 aaKnown RBP12.46□□□□□ -0.41
NUMB-212ENST00000554546 FAM153AQ9UHL3 310 aa12.46□□□□□ -0.41
NUMB-212ENST00000554546 CDK12Q9NYV4 1490 aaPredicted RBP12.46□□□□□ -0.41
NUMB-212ENST00000554546 PSMD14O00487 310 aa12.46□□□□□ -0.42
NUMB-212ENST00000554546 KRT16P08779 473 aa12.46□□□□□ -0.42
NUMB-212ENST00000554546 CCDC166P0CW27 439 aa12.46□□□□□ -0.42
NUMB-212ENST00000554546 ATP6V1C1P21283 382 aa12.46□□□□□ -0.42
NUMB-212ENST00000554546 CCNFP41002 786 aa12.46□□□□□ -0.42
NUMB-212ENST00000554546 SARSP49591 514 aaKnown RBP12.46□□□□□ -0.42
NUMB-212ENST00000554546 CCNG1P51959 295 aa12.46□□□□□ -0.42
NUMB-212ENST00000554546 VAV2P52735 878 aa12.46□□□□□ -0.42
NUMB-212ENST00000554546 NR1I3Q14994 352 aa12.46□□□□□ -0.42
NUMB-212ENST00000554546 RUFY4Q6ZNE9 571 aa12.46□□□□□ -0.42
NUMB-212ENST00000554546 LINC00301Q8NCQ3 95 aa12.46□□□□□ -0.42
NUMB-212ENST00000554546 SLC17A8Q8NDX2 589 aa12.46□□□□□ -0.42
NUMB-212ENST00000554546 FBF1Q8TES7 1133 aa12.46□□□□□ -0.42
NUMB-212ENST00000554546 LRRC42Q9Y546 428 aa12.46□□□□□ -0.42
NUMB-212ENST00000554546 SBNO1A3KN83 1393 aa12.46□□□□□ -0.42
NUMB-212ENST00000554546 CDC42BPAQ5VT25 1732 aa12.46□□□□□ -0.42
NUMB-212ENST00000554546 SPTLC2O15270 562 aa12.45□□□□□ -0.42
NUMB-212ENST00000554546 SYKP43405 635 aa12.45□□□□□ -0.42
NUMB-212ENST00000554546 FXR1P51114 621 aaKnown RBP eCLIP12.45□□□□□ -0.42
NUMB-212ENST00000554546 RAD23BP54727 409 aa12.45□□□□□ -0.42
NUMB-212ENST00000554546 HDAC4P56524 1084 aa12.45□□□□□ -0.42
NUMB-212ENST00000554546 IMMTQ16891 758 aaKnown RBP12.45□□□□□ -0.42
NUMB-212ENST00000554546 NAA16Q6N069 864 aaPredicted RBP12.45□□□□□ -0.42
NUMB-212ENST00000554546 KLHL29Q96CT2 875 aa12.45□□□□□ -0.42
NUMB-212ENST00000554546 HIC2Q96JB3 615 aa12.45□□□□□ -0.42
NUMB-212ENST00000554546 TUBE1Q9UJT0 475 aa12.45□□□□□ -0.42
NUMB-212ENST00000554546 SH3GLB1Q9Y371 365 aa12.45□□□□□ -0.42
NUMB-212ENST00000554546 PRG4Q92954 1404 aaPredicted RBP12.45□□□□□ -0.42
NUMB-212ENST00000554546 AOX1Q06278 1338 aa12.45□□□□□ -0.42
NUMB-212ENST00000554546 F8W031 263 aaPredicted RBP12.45□□□□□ -0.42
NUMB-212ENST00000554546 CCDC122Q5T0U0 273 aa12.45□□□□□ -0.42
NUMB-212ENST00000554546 PAPD7Q5XG87 772 aaKnown RBP12.45□□□□□ -0.42
NUMB-212ENST00000554546 CAVIN3Q969G5 261 aa12.45□□□□□ -0.42
NUMB-212ENST00000554546 ZNF180Q9UJW8 692 aa12.45□□□□□ -0.42
NUMB-212ENST00000554546 WWC3Q9ULE0 1092 aa12.45□□□□□ -0.42
NUMB-212ENST00000554546 NFU1Q9UMS0 254 aa12.45□□□□□ -0.42
NUMB-212ENST00000554546 GNA14O95837 355 aa12.45□□□□□ -0.42
NUMB-212ENST00000554546 LDHAP00338 332 aaKnown RBP12.45□□□□□ -0.42
NUMB-212ENST00000554546 FMR1Q06787 632 aaKnown RBP eCLIP12.45□□□□□ -0.42
NUMB-212ENST00000554546 ILDR1Q86SU0 546 aaPredicted RBP12.45□□□□□ -0.42
NUMB-212ENST00000554546 TMTC1Q8IUR5 882 aa12.45□□□□□ -0.42
NUMB-212ENST00000554546 GPATCH8Q9UKJ3 1502 aaKnown RBP12.44□□□□□ -0.42
NUMB-212ENST00000554546 DRD4P21917 467 aa12.44□□□□□ -0.42
NUMB-212ENST00000554546 OLFML2BQ68BL8 750 aa12.44□□□□□ -0.42
NUMB-212ENST00000554546 ZNF653Q96CK0 615 aa12.44□□□□□ -0.42
NUMB-212ENST00000554546 ANKRD27Q96NW4 1050 aa12.44□□□□□ -0.42
NUMB-212ENST00000554546 LRRC2Q9BYS8 371 aa12.44□□□□□ -0.42
NUMB-212ENST00000554546 SLC12A6Q9UHW9 1150 aa12.44□□□□□ -0.42
NUMB-212ENST00000554546 SBNO2Q9Y2G9 1366 aa12.44□□□□□ -0.42
NUMB-212ENST00000554546 ESYT3A0FGR9 886 aa12.44□□□□□ -0.42
NUMB-212ENST00000554546 MARCKSP29966 332 aaPredicted RBP12.44□□□□□ -0.42
NUMB-212ENST00000554546 MSH2P43246 934 aa12.44□□□□□ -0.42
NUMB-212ENST00000554546 NFE2L2Q16236 605 aa12.44□□□□□ -0.42
NUMB-212ENST00000554546 DDB1Q16531 1140 aa12.44□□□□□ -0.42
NUMB-212ENST00000554546 SLC44A4Q53GD3 710 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms