RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 HAUS4Q9H6D7 363 aa18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 POLD4Q9HCU8 107 aa18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 AATFQ9NY61 560 aaKnown RBP eCLIP18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 CEP131Q9UPN4 1083 aa18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 MYO1FO00160 1098 aa18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 PAPD7Q5XG87 772 aaKnown RBP18.93■□□□□ 0.62
PPP4R3A-202ENST00000554390 KCNJ18B7U540 433 aa18.92■□□□□ 0.62
PPP4R3A-202ENST00000554390 COPB1P53618 953 aaKnown RBP18.92■□□□□ 0.62
PPP4R3A-202ENST00000554390 CYP27A1Q02318 531 aa18.92■□□□□ 0.62
PPP4R3A-202ENST00000554390 KCNJ12Q14500 433 aa18.92■□□□□ 0.62
PPP4R3A-202ENST00000554390 GBP6Q6ZN66 633 aa18.92■□□□□ 0.62
PPP4R3A-202ENST00000554390 CAGE1Q8TC20 777 aa18.92■□□□□ 0.62
PPP4R3A-202ENST00000554390 JAKMIP2Q96AA8 810 aa18.92■□□□□ 0.62
PPP4R3A-202ENST00000554390 RPGRIP1Q96KN7 1286 aa18.92■□□□□ 0.62
PPP4R3A-202ENST00000554390 TTC26A0AVF1 554 aa18.92■□□□□ 0.62
PPP4R3A-202ENST00000554390 H0YHG0 523 aa18.92■□□□□ 0.62
PPP4R3A-202ENST00000554390 SETQ01105 290 aaPredicted RBP18.92■□□□□ 0.62
PPP4R3A-202ENST00000554390 CKAP4Q07065 602 aaKnown RBP18.92■□□□□ 0.62
PPP4R3A-202ENST00000554390 FUT2Q10981 343 aa18.92■□□□□ 0.62
PPP4R3A-202ENST00000554390 CCDC122Q5T0U0 273 aa18.92■□□□□ 0.62
PPP4R3A-202ENST00000554390 ZNF384Q8TF68 577 aa18.92■□□□□ 0.62
PPP4R3A-202ENST00000554390 CABS1Q96KC9 395 aa18.92■□□□□ 0.62
PPP4R3A-202ENST00000554390 UIMC1Q96RL1 719 aa18.92■□□□□ 0.62
PPP4R3A-202ENST00000554390 SH3GL2Q99962 352 aa18.92■□□□□ 0.62
PPP4R3A-202ENST00000554390 SND1Q7KZF4 910 aaKnown RBP eCLIP18.91■□□□□ 0.62
PPP4R3A-202ENST00000554390 CATIPQ7Z7H3 387 aa18.91■□□□□ 0.62
PPP4R3A-202ENST00000554390 ANKRD18AQ8IVF6 992 aa18.91■□□□□ 0.62
PPP4R3A-202ENST00000554390 SMCR8Q8TEV9 937 aaPredicted RBP18.91■□□□□ 0.62
PPP4R3A-202ENST00000554390 TFCP2L1Q9NZI6 479 aa18.91■□□□□ 0.62
PPP4R3A-202ENST00000554390 NIP7Q9Y221 180 aaKnown RBP eCLIP18.91■□□□□ 0.62
PPP4R3A-202ENST00000554390 PDE2AO00408 941 aaPredicted RBP18.91■□□□□ 0.62
PPP4R3A-202ENST00000554390 AENQ8WTP8 325 aaKnown RBP18.91■□□□□ 0.62
PPP4R3A-202ENST00000554390 RRP36Q96EU6 259 aaKnown RBP18.91■□□□□ 0.62
PPP4R3A-202ENST00000554390 FAM184BQ9ULE4 1060 aa18.91■□□□□ 0.62
PPP4R3A-202ENST00000554390 FAM205AQ6ZU69 1335 aa18.91■□□□□ 0.62
PPP4R3A-202ENST00000554390 BAZ2AQ9UIF9 1905 aaKnown RBP18.91■□□□□ 0.62
PPP4R3A-202ENST00000554390 C2orf54Q08AI8 447 aa18.9■□□□□ 0.62
PPP4R3A-202ENST00000554390 SH3RF1Q7Z6J0 888 aa18.9■□□□□ 0.62
PPP4R3A-202ENST00000554390 AGPAT5Q9NUQ2 364 aa18.9■□□□□ 0.62
PPP4R3A-202ENST00000554390 SMARCAL1Q9NZC9 954 aa18.9■□□□□ 0.62
PPP4R3A-202ENST00000554390 MROH5Q6ZUA9 1318 aa18.9■□□□□ 0.62
PPP4R3A-202ENST00000554390 MACROD2A1Z1Q3 448 aa18.9■□□□□ 0.62
PPP4R3A-202ENST00000554390 NDUFAB1O14561 156 aa18.9■□□□□ 0.62
PPP4R3A-202ENST00000554390 FNTAP49354 379 aa18.9■□□□□ 0.62
PPP4R3A-202ENST00000554390 TROAPQ12815 778 aa18.9■□□□□ 0.62
PPP4R3A-202ENST00000554390 ZNF512BQ96KM6 892 aaPredicted RBP18.9■□□□□ 0.62
PPP4R3A-202ENST00000554390 RNF26Q9BY78 433 aaPredicted RBP18.9■□□□□ 0.62
PPP4R3A-202ENST00000554390 GNL3LQ9NVN8 582 aaKnown RBP18.9■□□□□ 0.62
PPP4R3A-202ENST00000554390 LIMA1Q9UHB6 759 aaKnown RBP18.9■□□□□ 0.62
PPP4R3A-202ENST00000554390 RCCD1A6NED2 376 aa18.9■□□□□ 0.62
PPP4R3A-202ENST00000554390 HERVK_113P62684 666 aa18.9■□□□□ 0.62
PPP4R3A-202ENST00000554390 PAK1Q13153 545 aa18.9■□□□□ 0.62
PPP4R3A-202ENST00000554390 OTUD6BQ8N6M0 293 aa18.9■□□□□ 0.62
PPP4R3A-202ENST00000554390 SLIT2O94813 1529 aa18.89■□□□□ 0.62
PPP4R3A-202ENST00000554390 GOLGA8KD6RF30 607 aa18.89■□□□□ 0.61
PPP4R3A-202ENST00000554390 XBP1P17861 261 aa18.89■□□□□ 0.61
PPP4R3A-202ENST00000554390 IGHMBP2P38935 993 aaKnown RBP18.89■□□□□ 0.61
PPP4R3A-202ENST00000554390 TRIM14Q14142 442 aa18.89■□□□□ 0.61
PPP4R3A-202ENST00000554390 STAG2Q8N3U4 1231 aa18.89■□□□□ 0.61
PPP4R3A-202ENST00000554390 LRRC10BA6NIK2 292 aa18.89■□□□□ 0.61
PPP4R3A-202ENST00000554390 KIF1CO43896 1103 aaKnown RBP18.89■□□□□ 0.61
PPP4R3A-202ENST00000554390 MATR3P43243 847 aaKnown RBP eCLIP18.89■□□□□ 0.61
PPP4R3A-202ENST00000554390 TCP11X2Q5H9J9 407 aa18.89■□□□□ 0.61
PPP4R3A-202ENST00000554390 B4DLN1 442 aa18.88■□□□□ 0.61
PPP4R3A-202ENST00000554390 KIAA0754O94854 1291 aa18.88■□□□□ 0.61
PPP4R3A-202ENST00000554390 DNA2P51530 1060 aa18.88■□□□□ 0.61
PPP4R3A-202ENST00000554390 PDCLQ13371 301 aa18.88■□□□□ 0.61
PPP4R3A-202ENST00000554390 TYW1BQ6NUM6 668 aa18.88■□□□□ 0.61
PPP4R3A-202ENST00000554390 IRF2BP1Q8IU81 584 aa18.88■□□□□ 0.61
PPP4R3A-202ENST00000554390 LRRC15Q8TF66 581 aa18.88■□□□□ 0.61
PPP4R3A-202ENST00000554390 PCMTD1Q96MG8 357 aaPredicted RBP18.88■□□□□ 0.61
PPP4R3A-202ENST00000554390 GSDMAQ96QA5 445 aa18.88■□□□□ 0.61
PPP4R3A-202ENST00000554390 LACRTQ9GZZ8 138 aa18.88■□□□□ 0.61
PPP4R3A-202ENST00000554390 COL4A1P02462 1669 aa18.88■□□□□ 0.61
PPP4R3A-202ENST00000554390 TOGARAM1Q9Y4F4 1720 aa18.88■□□□□ 0.61
PPP4R3A-202ENST00000554390 GOLGA8HP0CJ92 632 aa18.88■□□□□ 0.61
PPP4R3A-202ENST00000554390 ATP2B2Q01814 1243 aa18.88■□□□□ 0.61
PPP4R3A-202ENST00000554390 B4GALNT4Q76KP1 1039 aa18.88■□□□□ 0.61
PPP4R3A-202ENST00000554390 KRT26Q7Z3Y9 468 aa18.88■□□□□ 0.61
PPP4R3A-202ENST00000554390 ARL8AQ96BM9 186 aa18.88■□□□□ 0.61
PPP4R3A-202ENST00000554390 TMEM60Q9H2L4 133 aa18.88■□□□□ 0.61
PPP4R3A-202ENST00000554390 RNF41Q9H4P4 317 aaPredicted RBP18.88■□□□□ 0.61
PPP4R3A-202ENST00000554390 PAPPAQ13219 1627 aa18.88■□□□□ 0.61
PPP4R3A-202ENST00000554390 FAM170AA1A519 330 aa18.87■□□□□ 0.61
PPP4R3A-202ENST00000554390 EHD2Q9NZN4 543 aa18.87■□□□□ 0.61
PPP4R3A-202ENST00000554390 RPN1P04843 607 aaKnown RBP18.87■□□□□ 0.61
PPP4R3A-202ENST00000554390 PLEKP08567 350 aaPredicted RBP18.87■□□□□ 0.61
PPP4R3A-202ENST00000554390 EZH2Q15910 746 aaKnown RBP18.87■□□□□ 0.61
PPP4R3A-202ENST00000554390 PDXDC2PQ6P474 469 aa18.87■□□□□ 0.61
PPP4R3A-202ENST00000554390 RPAINQ86UA6 219 aa18.87■□□□□ 0.61
PPP4R3A-202ENST00000554390 ZNF34Q8IZ26 560 aa18.87■□□□□ 0.61
PPP4R3A-202ENST00000554390 HDAC7Q8WUI4 952 aa18.87■□□□□ 0.61
PPP4R3A-202ENST00000554390 CD248Q9HCU0 757 aa18.87■□□□□ 0.61
PPP4R3A-202ENST00000554390 A1CFQ9NQ94 594 aaKnown RBP18.87■□□□□ 0.61
PPP4R3A-202ENST00000554390 STRCP1A6NGW2 1772 aa18.87■□□□□ 0.61
PPP4R3A-202ENST00000554390 TAF1P21675 1872 aa18.87■□□□□ 0.61
PPP4R3A-202ENST00000554390 MEFVO15553 781 aaPredicted RBP18.87■□□□□ 0.61
PPP4R3A-202ENST00000554390 OPA1O60313 960 aa18.87■□□□□ 0.61
PPP4R3A-202ENST00000554390 FSBPO95073 299 aa18.87■□□□□ 0.61
PPP4R3A-202ENST00000554390 PARP1P09874 1014 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms