RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 BTBD18B2RXH4 712 aa13.52□□□□□ -0.25
NEK9-202ENST00000553823 KIF28PB7ZC32 967 aa13.52□□□□□ -0.25
NEK9-202ENST00000553823 KIF3CO14782 793 aa13.52□□□□□ -0.25
NEK9-202ENST00000553823 PPP1R11O60927 126 aaPredicted RBP13.52□□□□□ -0.25
NEK9-202ENST00000553823 FLOT1O75955 427 aa13.52□□□□□ -0.25
NEK9-202ENST00000553823 U2AF2P26368 475 aaKnown RBP eCLIP13.52□□□□□ -0.25
NEK9-202ENST00000553823 KRT2P35908 639 aa13.52□□□□□ -0.25
NEK9-202ENST00000553823 CST9Q5W186 159 aa13.52□□□□□ -0.25
NEK9-202ENST00000553823 TYW1BQ6NUM6 668 aa13.52□□□□□ -0.25
NEK9-202ENST00000553823 PPP1R18Q6NYC8 613 aa13.52□□□□□ -0.25
NEK9-202ENST00000553823 PRRT2Q7Z6L0 340 aaPredicted RBP13.52□□□□□ -0.25
NEK9-202ENST00000553823 FBXO11Q86XK2 927 aa13.52□□□□□ -0.25
NEK9-202ENST00000553823 PRPF38AQ8NAV1 312 aaKnown RBP13.52□□□□□ -0.25
NEK9-202ENST00000553823 COA7Q96BR5 231 aa13.52□□□□□ -0.25
NEK9-202ENST00000553823 LOC285556D6RIA3 1793 aa13.52□□□□□ -0.25
NEK9-202ENST00000553823 ESYT2A0FGR8 921 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 USP17L15C9J2P7 530 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 USP17L13C9JLJ4 530 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 USP17L11C9JVI0 530 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 USP17L18D6R9N7 530 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 USP17L22D6RA61 530 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 USP17L17D6RBQ6 530 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 USP17L19D6RCP7 530 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 USP17L20D6RJB6 530 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 GNA11P29992 359 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 SNAP25P60880 206 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 USP17L24Q0WX57 530 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 TRAF1Q13077 416 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 NPY5RQ15761 445 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 FAM173BQ6P4H8 233 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 NOSTRINQ8IVI9 506 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 DAGLBQ8NCG7 672 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 PROCA1Q8NCQ7 364 aaPredicted RBP13.51□□□□□ -0.25
NEK9-202ENST00000553823 SMC1BQ8NDV3 1235 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 OXER1Q8TDS5 423 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 AMNQ9BXJ7 453 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 ZMYND12Q9H0C1 365 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 RANBP17Q9H2T7 1088 aaKnown RBP13.51□□□□□ -0.25
NEK9-202ENST00000553823 C6orf50Q9HD87 102 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 PPP1R9AQ9ULJ8 1098 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 PCDHA4Q9UN74 947 aa13.51□□□□□ -0.25
NEK9-202ENST00000553823 PASKQ96RG2 1323 aa13.5□□□□□ -0.25
NEK9-202ENST00000553823 SMCO2A6NFE2 343 aa13.5□□□□□ -0.25
NEK9-202ENST00000553823 FDX1P10109 184 aa13.5□□□□□ -0.25
NEK9-202ENST00000553823 GJA5P36382 358 aa13.5□□□□□ -0.25
NEK9-202ENST00000553823 DNM1Q05193 864 aaKnown RBP13.5□□□□□ -0.25
NEK9-202ENST00000553823 NR5A1Q13285 461 aa13.5□□□□□ -0.25
NEK9-202ENST00000553823 SNAPC2Q13487 334 aa13.5□□□□□ -0.25
NEK9-202ENST00000553823 GADL1Q6ZQY3 521 aa13.5□□□□□ -0.25
NEK9-202ENST00000553823 CATSPERGQ6ZRH7 1159 aa13.5□□□□□ -0.25
NEK9-202ENST00000553823 BLIDQ8IZY5 108 aa13.5□□□□□ -0.25
NEK9-202ENST00000553823 WNK4Q96J92 1243 aa13.5□□□□□ -0.25
NEK9-202ENST00000553823 CHAMP1Q96JM3 812 aa13.5□□□□□ -0.25
NEK9-202ENST00000553823 PCDHA1Q9Y5I3 950 aa13.5□□□□□ -0.25
NEK9-202ENST00000553823 COL11A1P12107 1806 aaPredicted RBP13.5□□□□□ -0.25
NEK9-202ENST00000553823 GOLGA6L22H0YM25 854 aa13.49□□□□□ -0.25
NEK9-202ENST00000553823 NCLP19338 710 aaKnown RBP13.49□□□□□ -0.25
NEK9-202ENST00000553823 MCM4P33991 863 aa13.49□□□□□ -0.25
NEK9-202ENST00000553823 HUNKP57058 714 aa13.49□□□□□ -0.25
NEK9-202ENST00000553823 KRT85P78386 507 aa13.49□□□□□ -0.25
NEK9-202ENST00000553823 COG2Q14746 738 aa13.49□□□□□ -0.25
NEK9-202ENST00000553823 NFKBIBQ15653 356 aa13.49□□□□□ -0.25
NEK9-202ENST00000553823 MYSM1Q5VVJ2 828 aa13.49□□□□□ -0.25
NEK9-202ENST00000553823 ATL3Q6DD88 541 aa13.49□□□□□ -0.25
NEK9-202ENST00000553823 CCDC174Q6PII3 467 aa13.49□□□□□ -0.25
NEK9-202ENST00000553823 FASTKD5Q7L8L6 764 aaKnown RBP13.49□□□□□ -0.25
NEK9-202ENST00000553823 BICD2Q8TD16 824 aa13.49□□□□□ -0.25
NEK9-202ENST00000553823 ZNF396Q96N95 335 aaPredicted RBP13.49□□□□□ -0.25
NEK9-202ENST00000553823 MYPNQ86TC9 1320 aa13.48□□□□□ -0.25
NEK9-202ENST00000553823 ZBED4O75132 1171 aa13.48□□□□□ -0.25
NEK9-202ENST00000553823 HOXA7P31268 230 aaPredicted RBP13.48□□□□□ -0.25
NEK9-202ENST00000553823 ADCY7P51828 1080 aa13.48□□□□□ -0.25
NEK9-202ENST00000553823 MRPL12P52815 198 aaKnown RBP13.48□□□□□ -0.25
NEK9-202ENST00000553823 USH1GQ495M9 461 aa13.48□□□□□ -0.25
NEK9-202ENST00000553823 TREML2Q5T2D2 321 aa13.48□□□□□ -0.25
NEK9-202ENST00000553823 CUL5Q93034 780 aa13.48□□□□□ -0.25
NEK9-202ENST00000553823 TNFRSF25Q93038 417 aa13.48□□□□□ -0.25
NEK9-202ENST00000553823 ATG4CQ96DT6 458 aa13.48□□□□□ -0.25
NEK9-202ENST00000553823 GLT8D2Q9H1C3 349 aa13.48□□□□□ -0.25
NEK9-202ENST00000553823 SLC38A10Q9HBR0 1119 aa13.48□□□□□ -0.25
NEK9-202ENST00000553823 RIC8AQ9NPQ8 531 aa13.48□□□□□ -0.25
NEK9-202ENST00000553823 HOXC10Q9NYD6 342 aa13.48□□□□□ -0.25
NEK9-202ENST00000553823 TFIP11Q9UBB9 837 aaKnown RBP13.48□□□□□ -0.25
NEK9-202ENST00000553823 CFAP45Q9UL16 551 aa13.48□□□□□ -0.25
NEK9-202ENST00000553823 PNMA2Q9UL42 364 aa13.48□□□□□ -0.25
NEK9-202ENST00000553823 CNPY2Q9Y2B0 182 aa13.48□□□□□ -0.25
NEK9-202ENST00000553823 CTDP1Q9Y5B0 961 aaPredicted RBP13.48□□□□□ -0.25
NEK9-202ENST00000553823 DDX11L8A8MPP1 907 aa13.47□□□□□ -0.25
NEK9-202ENST00000553823 M0R2N6 131 aa13.47□□□□□ -0.25
NEK9-202ENST00000553823 VWA5AO00534 786 aa13.47□□□□□ -0.25
NEK9-202ENST00000553823 ADAMTS3O15072 1205 aa13.47□□□□□ -0.25
NEK9-202ENST00000553823 TOMM70O94826 608 aa13.47□□□□□ -0.25
NEK9-202ENST00000553823 ICAM1P05362 532 aa13.47□□□□□ -0.25
NEK9-202ENST00000553823 ZBTB48P10074 688 aaPredicted RBP13.47□□□□□ -0.25
NEK9-202ENST00000553823 GTF2A2P52657 109 aa13.47□□□□□ -0.25
NEK9-202ENST00000553823 MOGSQ13724 837 aa13.47□□□□□ -0.25
NEK9-202ENST00000553823 CSPP1Q1MSJ5 1256 aa13.47□□□□□ -0.25
NEK9-202ENST00000553823 SPRYD7Q5W111 196 aa13.47□□□□□ -0.25
NEK9-202ENST00000553823 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
NEK9-202ENST00000553823 REXO1Q8N1G1 1221 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms