RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 CIB2O75838 187 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 BDNFP23560 247 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 CD151P48509 253 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 BRSK2Q8IWQ3 736 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 CNBD1Q8NA66 436 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 ZWILCHQ9H900 591 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 ARPC4-TTLL3A0A0A6YYG9 625 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 HALP42357 657 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 SYKP43405 635 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 DDR1Q08345 913 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 CLIP3Q96DZ5 547 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 NUDCD1Q96RS6 583 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 WDR24Q96S15 920 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 RAD54L2Q9Y4B4 1467 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 NCOA1Q15788 1441 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 DISP3Q9P2K9 1392 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 SMARCA1P28370 1054 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 PRKG1Q13976 671 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 PRR16Q569H4 304 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 BRF1Q92994 677 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 VPS16Q9H269 839 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 DISC1Q9NRI5 854 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 LRRIQ4A6NIV6 560 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 SPDYE5A6NIY4 337 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 FESP07332 822 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 HABP4Q5JVS0 413 aaKnown RBP9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 RNF19BQ6ZMZ0 732 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 MYO1HQ8N1T3 1032 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 SLC43A3Q8NBI5 491 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 PRCCQ92733 491 aaPredicted RBP9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 ANKRD27Q96NW4 1050 aa9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 CDC5LQ99459 802 aaKnown RBP9.86□□□□□ -0.83
GTF2A1-203ENST00000553612 CTNND1O60716 968 aaKnown RBP9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 HOXD11P31277 338 aaPredicted RBP9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 KIF22Q14807 665 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 RIC3Q7Z5B4 369 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 DNAJC9Q8WXX5 260 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 GPCPD1Q9NPB8 672 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 CECR2Q9BXF3 1484 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 CTNNA1P35221 906 aaKnown RBP9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 SCTRP47872 440 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 GNAI1P63096 354 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 CETN1Q12798 172 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 ANKRD1Q15327 319 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 MYOCDQ8IZQ8 938 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 ATP2A3Q93084 1043 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 NLRP3Q96P20 1036 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 TELO2Q9Y4R8 837 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 DCTN3O75935 186 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 KRT13P13646 458 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 STAT2P52630 851 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 ATP1A4Q13733 1029 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 OTUD7BQ6GQQ9 843 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 FUKQ8N0W3 1084 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 IRX2Q9BZI1 471 aaPredicted RBP9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 CEP44Q9C0F1 390 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 BTBD7Q9P203 1132 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 MAPKBP1O60336 1514 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 SBNO1A3KN83 1393 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 FOSL1P15407 271 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 KRT20P35900 424 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 DTX3LQ8TDB6 740 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 ESYT1Q9BSJ8 1104 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 EPN3Q9H201 632 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 F8VZ95 297 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 LPIN2Q92539 896 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 CATSPER2Q96P56 530 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 TUFT1Q9NNX1 390 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 ZNF148Q9UQR1 794 aa9.85□□□□□ -0.83
GTF2A1-203ENST00000553612 LDHBP07195 334 aaKnown RBP9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 STAT6P42226 847 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 SEPT2Q15019 361 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 NEK5Q6P3R8 708 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 GALNT6Q8NCL4 622 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 GABPB2Q8TAK5 448 aaPredicted RBP9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 PNKPQ96T60 521 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 TEKT2Q9UIF3 430 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 BARX2Q9UMQ3 279 aaPredicted RBP9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 NOTOA8MTQ0 251 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 WASHC5Q12768 1159 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 DDX28Q9NUL7 540 aaKnown RBP9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 PALD1Q9ULE6 856 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 DOLKQ9UPQ8 538 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 EIF3FO00303 357 aaPredicted RBP9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 CCND1P24385 295 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 CXCR5P32302 372 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 PTK2Q05397 1052 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 PTGISQ16647 500 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 FAM117BQ6P1L5 589 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 FERD3LQ96RJ6 166 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 CCDC8Q9H0W5 538 aaPredicted RBP9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 VPS37BQ9H9H4 285 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 TBK1Q9UHD2 729 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 AK9Q5TCS8 1911 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 AKR1B15C9JRZ8 316 aaPredicted RBP9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 MGEA5O60502 916 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 POTEJP0CG39 1038 aa9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 NOP14P78316 857 aaKnown RBP9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 MRPS15P82914 257 aaKnown RBP9.84□□□□□ -0.83
GTF2A1-203ENST00000553612 TRIM67Q6ZTA4 783 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms