RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 EEF2P13639 858 aaKnown RBP16.71■□□□□ 0.27
PRPF39-204ENST00000553605 GRB10Q13322 594 aa16.71■□□□□ 0.27
PRPF39-204ENST00000553605 GJD3Q8N144 294 aa16.71■□□□□ 0.27
PRPF39-204ENST00000553605 RAD21O60216 631 aa16.7■□□□□ 0.26
PRPF39-204ENST00000553605 ALADP13716 330 aa16.7■□□□□ 0.26
PRPF39-204ENST00000553605 SLC4A3P48751 1232 aa16.7■□□□□ 0.26
PRPF39-204ENST00000553605 TNFAIP2Q03169 654 aa16.7■□□□□ 0.26
PRPF39-204ENST00000553605 CSPP1Q1MSJ5 1256 aa16.7■□□□□ 0.26
PRPF39-204ENST00000553605 FAM83BQ5T0W9 1011 aa16.7■□□□□ 0.26
PRPF39-204ENST00000553605 NOL8Q76FK4 1167 aaKnown RBP16.7■□□□□ 0.26
PRPF39-204ENST00000553605 ARMCX2Q7L311 632 aa16.7■□□□□ 0.26
PRPF39-204ENST00000553605 PIAS4Q8N2W9 510 aaPredicted RBP16.7■□□□□ 0.26
PRPF39-204ENST00000553605 PHOSPHO2Q8TCD6 241 aa16.7■□□□□ 0.26
PRPF39-204ENST00000553605 SDR42E1Q8WUS8 393 aa16.7■□□□□ 0.26
PRPF39-204ENST00000553605 CCDC17Q96LX7 622 aa16.7■□□□□ 0.26
PRPF39-204ENST00000553605 CCDC8Q9H0W5 538 aaPredicted RBP16.7■□□□□ 0.26
PRPF39-204ENST00000553605 GOPCQ9HD26 462 aa16.7■□□□□ 0.26
PRPF39-204ENST00000553605 DCP1AQ9NPI6 582 aaPredicted RBP16.7■□□□□ 0.26
PRPF39-204ENST00000553605 TLR7Q9NYK1 1049 aaKnown RBP16.7■□□□□ 0.26
PRPF39-204ENST00000553605 KIF28PB7ZC32 967 aa16.69■□□□□ 0.26
PRPF39-204ENST00000553605 ARHGEF15O94989 841 aa16.69■□□□□ 0.26
PRPF39-204ENST00000553605 DEFB128Q7Z7B8 93 aa16.69■□□□□ 0.26
PRPF39-204ENST00000553605 FAM178BQ8IXR5 827 aa16.69■□□□□ 0.26
PRPF39-204ENST00000553605 CCDC144CPQ8IYA2 1237 aa16.69■□□□□ 0.26
PRPF39-204ENST00000553605 ANKRD35Q8N283 1001 aa16.69■□□□□ 0.26
PRPF39-204ENST00000553605 FGD4Q96M96 766 aa16.69■□□□□ 0.26
PRPF39-204ENST00000553605 FBXL18Q96ME1 805 aa16.69■□□□□ 0.26
PRPF39-204ENST00000553605 SLC9A7Q96T83 725 aa16.69■□□□□ 0.26
PRPF39-204ENST00000553605 KATNBL1Q9H079 304 aa16.69■□□□□ 0.26
PRPF39-204ENST00000553605 KCNH6Q9H252 994 aa16.69■□□□□ 0.26
PRPF39-204ENST00000553605 NAV1Q8NEY1 1877 aa16.69■□□□□ 0.26
PRPF39-204ENST00000553605 ASTN1O14525 1302 aa16.69■□□□□ 0.26
PRPF39-204ENST00000553605 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.68■□□□□ 0.26
PRPF39-204ENST00000553605 ANP32CO43423 234 aa16.68■□□□□ 0.26
PRPF39-204ENST00000553605 ZEB2O60315 1214 aa16.68■□□□□ 0.26
PRPF39-204ENST00000553605 LPXNO60711 386 aa16.68■□□□□ 0.26
PRPF39-204ENST00000553605 SURF6O75683 361 aaKnown RBP16.68■□□□□ 0.26
PRPF39-204ENST00000553605 ACTN1P12814 892 aa16.68■□□□□ 0.26
PRPF39-204ENST00000553605 FSCN1Q16658 493 aaKnown RBP16.68■□□□□ 0.26
PRPF39-204ENST00000553605 CPXCR1Q8N123 301 aa16.68■□□□□ 0.26
PRPF39-204ENST00000553605 ARHGAP45Q92619 1136 aa16.68■□□□□ 0.26
PRPF39-204ENST00000553605 SLF1Q9BQI6 1058 aa16.68■□□□□ 0.26
PRPF39-204ENST00000553605 KANSL2Q9H9L4 492 aa16.68■□□□□ 0.26
PRPF39-204ENST00000553605 WDFY4Q6ZS81 3184 aa16.67■□□□□ 0.26
PRPF39-204ENST00000553605 CT47B1P0C2W7 299 aaPredicted RBP16.67■□□□□ 0.26
PRPF39-204ENST00000553605 SSTR3P32745 418 aaPredicted RBP16.67■□□□□ 0.26
PRPF39-204ENST00000553605 PSMC6P62333 389 aa16.67■□□□□ 0.26
PRPF39-204ENST00000553605 POLA2Q14181 598 aa16.67■□□□□ 0.26
PRPF39-204ENST00000553605 TLK2Q86UE8 772 aa16.67■□□□□ 0.26
PRPF39-204ENST00000553605 HERC6Q8IVU3 1022 aa16.67■□□□□ 0.26
PRPF39-204ENST00000553605 EAF2Q96CJ1 260 aaPredicted RBP16.67■□□□□ 0.26
PRPF39-204ENST00000553605 AP5M1Q9H0R1 490 aa16.67■□□□□ 0.26
PRPF39-204ENST00000553605 LMCD1Q9NZU5 365 aa16.67■□□□□ 0.26
PRPF39-204ENST00000553605 GNEQ9Y223 722 aaKnown RBP16.67■□□□□ 0.26
PRPF39-204ENST00000553605 ATP2A1O14983 1001 aa16.66■□□□□ 0.26
PRPF39-204ENST00000553605 DYNC1LI2O43237 492 aaPredicted RBP16.66■□□□□ 0.26
PRPF39-204ENST00000553605 CDK8P49336 464 aa16.66■□□□□ 0.26
PRPF39-204ENST00000553605 SLC9C2Q5TAH2 1124 aa16.66■□□□□ 0.26
PRPF39-204ENST00000553605 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.66■□□□□ 0.26
PRPF39-204ENST00000553605 PRPF38AQ8NAV1 312 aaKnown RBP16.66■□□□□ 0.26
PRPF39-204ENST00000553605 ALDH8A1Q9H2A2 487 aaPredicted RBP16.66■□□□□ 0.26
PRPF39-204ENST00000553605 UBE2ZQ9H832 354 aaPredicted RBP16.66■□□□□ 0.26
PRPF39-204ENST00000553605 MCM3APO60318 1980 aa16.66■□□□□ 0.26
PRPF39-204ENST00000553605 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.65■□□□□ 0.26
PRPF39-204ENST00000553605 ZBED4O75132 1171 aa16.65■□□□□ 0.26
PRPF39-204ENST00000553605 SUPT20HL2P0C7V6 817 aa16.65■□□□□ 0.26
PRPF39-204ENST00000553605 CYP2C9P11712 490 aa16.65■□□□□ 0.26
PRPF39-204ENST00000553605 LEXMQ3ZCV2 418 aa16.65■□□□□ 0.26
PRPF39-204ENST00000553605 SPRED2Q7Z698 418 aa16.65■□□□□ 0.26
PRPF39-204ENST00000553605 LCORLQ8N3X6 602 aa16.65■□□□□ 0.26
PRPF39-204ENST00000553605 NUP88Q99567 741 aaPredicted RBP16.65■□□□□ 0.26
PRPF39-204ENST00000553605 FBXO40Q9UH90 709 aa16.65■□□□□ 0.26
PRPF39-204ENST00000553605 CTDP1Q9Y5B0 961 aaPredicted RBP16.65■□□□□ 0.26
PRPF39-204ENST00000553605 PDE6AP16499 860 aa16.64■□□□□ 0.25
PRPF39-204ENST00000553605 CHST13Q8NET6 341 aa16.64■□□□□ 0.25
PRPF39-204ENST00000553605 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.64■□□□□ 0.25
PRPF39-204ENST00000553605 SSH3Q8TE77 659 aa16.64■□□□□ 0.25
PRPF39-204ENST00000553605 RAVER2Q9HCJ3 691 aaKnown RBP16.64■□□□□ 0.25
PRPF39-204ENST00000553605 TRMT13Q9NUP7 481 aaKnown RBP16.64■□□□□ 0.25
PRPF39-204ENST00000553605 MYH8P13535 1937 aa16.64■□□□□ 0.25
PRPF39-204ENST00000553605 BCAR3O75815 825 aa16.63■□□□□ 0.25
PRPF39-204ENST00000553605 IL9P15248 144 aa16.63■□□□□ 0.25
PRPF39-204ENST00000553605 SMPD1P17405 629 aa16.63■□□□□ 0.25
PRPF39-204ENST00000553605 PTGS1P23219 599 aa16.63■□□□□ 0.25
PRPF39-204ENST00000553605 RFC2P35250 354 aa16.63■□□□□ 0.25
PRPF39-204ENST00000553605 ATP8B2P98198 1209 aa16.63■□□□□ 0.25
PRPF39-204ENST00000553605 CNTN2Q02246 1040 aa16.63■□□□□ 0.25
PRPF39-204ENST00000553605 TTF1Q15361 905 aaPredicted RBP16.63■□□□□ 0.25
PRPF39-204ENST00000553605 C12orf60Q5U649 245 aa16.63■□□□□ 0.25
PRPF39-204ENST00000553605 TRMT2AQ8IZ69 625 aaKnown RBP16.63■□□□□ 0.25
PRPF39-204ENST00000553605 FTOQ9C0B1 505 aaKnown RBP eCLIP16.63■□□□□ 0.25
PRPF39-204ENST00000553605 ZNF532Q9HCE3 1301 aa16.63■□□□□ 0.25
PRPF39-204ENST00000553605 CYP2D7A0A087X1C5 515 aa16.62■□□□□ 0.25
PRPF39-204ENST00000553605 DCXO43602 365 aa16.62■□□□□ 0.25
PRPF39-204ENST00000553605 KCNA5P22460 613 aa16.62■□□□□ 0.25
PRPF39-204ENST00000553605 RARSP54136 660 aaKnown RBP16.62■□□□□ 0.25
PRPF39-204ENST00000553605 C16orf86Q6ZW13 317 aa16.62■□□□□ 0.25
PRPF39-204ENST00000553605 GDPD5Q8WTR4 605 aa16.62■□□□□ 0.25
PRPF39-204ENST00000553605 ARMT1Q9H993 441 aa16.62■□□□□ 0.25
PRPF39-204ENST00000553605 ATP8A2Q9NTI2 1148 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms