RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 TAF6LQ9Y6J9 622 aa27.68■■■□□ 2.02
TDP1-205ENST00000553527 ZNF536O15090 1300 aa27.67■■■□□ 2.02
TDP1-205ENST00000553527 CDC45O75419 566 aa27.67■■■□□ 2.02
TDP1-205ENST00000553527 ZNF792Q3KQV3 632 aa27.67■■■□□ 2.02
TDP1-205ENST00000553527 SYDE2Q5VT97 1194 aa27.67■■■□□ 2.02
TDP1-205ENST00000553527 CHST13Q8NET6 341 aa27.67■■■□□ 2.02
TDP1-205ENST00000553527 DIS3LQ8TF46 1054 aaKnown RBP27.67■■■□□ 2.02
TDP1-205ENST00000553527 TAL1P17542 331 aaPredicted RBP27.66■■■□□ 2.02
TDP1-205ENST00000553527 ZNF543Q08ER8 600 aa27.66■■■□□ 2.02
TDP1-205ENST00000553527 ANO1Q5XXA6 986 aa27.66■■■□□ 2.02
TDP1-205ENST00000553527 LHX8Q68G74 356 aa27.66■■■□□ 2.02
TDP1-205ENST00000553527 CASC1Q6TDU7 716 aa27.66■■■□□ 2.02
TDP1-205ENST00000553527 UBE2Q1Q7Z7E8 422 aa27.66■■■□□ 2.02
TDP1-205ENST00000553527 TRERF1Q96PN7 1200 aa27.66■■■□□ 2.02
TDP1-205ENST00000553527 RNF146Q9NTX7 359 aa27.66■■■□□ 2.02
TDP1-205ENST00000553527 FBXO40Q9UH90 709 aa27.66■■■□□ 2.02
TDP1-205ENST00000553527 OGDHLQ9ULD0 1010 aa27.66■■■□□ 2.02
TDP1-205ENST00000553527 FRMPD3Q5JV73 1810 aa27.65■■■□□ 2.02
TDP1-205ENST00000553527 E7EWF7 191 aa27.65■■■□□ 2.02
TDP1-205ENST00000553527 IFIT1BQ5T764 474 aaKnown RBP27.65■■■□□ 2.02
TDP1-205ENST00000553527 BTNL9Q6UXG8 535 aa27.65■■■□□ 2.02
TDP1-205ENST00000553527 RALYLQ86SE5 291 aaKnown RBP27.65■■■□□ 2.02
TDP1-205ENST00000553527 CPVLQ9H3G5 476 aa27.65■■■□□ 2.02
TDP1-205ENST00000553527 DDX20Q9UHI6 824 aaKnown RBP27.65■■■□□ 2.02
TDP1-205ENST00000553527 CCPG1Q9ULG6 757 aa27.65■■■□□ 2.02
TDP1-205ENST00000553527 IGHA2P01877 340 aa27.64■■■□□ 2.02
TDP1-205ENST00000553527 CYBAP13498 195 aa27.64■■■□□ 2.02
TDP1-205ENST00000553527 CAPN2P17655 700 aa27.64■■■□□ 2.02
TDP1-205ENST00000553527 CHST3Q7LGC8 479 aa27.64■■■□□ 2.02
TDP1-205ENST00000553527 NECAB2Q7Z6G3 386 aa27.64■■■□□ 2.02
TDP1-205ENST00000553527 ANKS1AQ92625 1134 aa27.64■■■□□ 2.02
TDP1-205ENST00000553527 TINF2Q9BSI4 451 aa27.64■■■□□ 2.02
TDP1-205ENST00000553527 UBA5Q9GZZ9 404 aa27.64■■■□□ 2.02
TDP1-205ENST00000553527 LSG1Q9H089 658 aaKnown RBP27.64■■■□□ 2.02
TDP1-205ENST00000553527 ACAD9Q9H845 621 aa27.64■■■□□ 2.02
TDP1-205ENST00000553527 ANO2Q9NQ90 1003 aa27.64■■■□□ 2.02
TDP1-205ENST00000553527 DIS3Q9Y2L1 958 aaKnown RBP27.64■■■□□ 2.02
TDP1-205ENST00000553527 MCM3APO60318 1980 aa27.63■■■□□ 2.01
TDP1-205ENST00000553527 SNHG28P0DPA3 235 aa27.63■■■□□ 2.01
TDP1-205ENST00000553527 PRPF38BQ5VTL8 546 aaKnown RBP27.63■■■□□ 2.01
TDP1-205ENST00000553527 STOX1Q6ZVD7 989 aa27.63■■■□□ 2.01
TDP1-205ENST00000553527 ANKLE1Q8NAG6 615 aa27.63■■■□□ 2.01
TDP1-205ENST00000553527 NCOA7Q8NI08 942 aa27.63■■■□□ 2.01
TDP1-205ENST00000553527 HTATIP2Q9BUP3 242 aa27.63■■■□□ 2.01
TDP1-205ENST00000553527 RANBP17Q9H2T7 1088 aaKnown RBP27.63■■■□□ 2.01
TDP1-205ENST00000553527 MUM1L1Q5H9M0 696 aa27.62■■■□□ 2.01
TDP1-205ENST00000553527 DNAJC25-GNG10A0A024R161 153 aa27.61■■■□□ 2.01
TDP1-205ENST00000553527 IFIT3O14879 490 aaKnown RBP27.61■■■□□ 2.01
TDP1-205ENST00000553527 MYCNP04198 464 aaPredicted RBP27.61■■■□□ 2.01
TDP1-205ENST00000553527 ICAM1P05362 532 aa27.61■■■□□ 2.01
TDP1-205ENST00000553527 TKFCQ3LXA3 575 aa27.61■■■□□ 2.01
TDP1-205ENST00000553527 GPATCH4Q5T3I0 446 aaKnown RBP27.61■■■□□ 2.01
TDP1-205ENST00000553527 MSCO60682 206 aa27.6■■■□□ 2.01
TDP1-205ENST00000553527 MNX1P50219 401 aaPredicted RBP27.6■■■□□ 2.01
TDP1-205ENST00000553527 CNTN2Q02246 1040 aa27.6■■■□□ 2.01
TDP1-205ENST00000553527 SEC23AQ15436 765 aa27.6■■■□□ 2.01
TDP1-205ENST00000553527 MYH6P13533 1939 aa27.6■■■□□ 2.01
TDP1-205ENST00000553527 ERICH2A1L162 156 aa27.59■■■□□ 2.01
TDP1-205ENST00000553527 POTEB2H3BUK9 544 aa27.59■■■□□ 2.01
TDP1-205ENST00000553527 PARP1P09874 1014 aaKnown RBP27.59■■■□□ 2.01
TDP1-205ENST00000553527 NSMFQ6X4W1 530 aa27.59■■■□□ 2.01
TDP1-205ENST00000553527 C11orf49Q9H6J7 331 aa27.59■■■□□ 2.01
TDP1-205ENST00000553527 VAT1LQ9HCJ6 419 aa27.59■■■□□ 2.01
TDP1-205ENST00000553527 A1CFQ9NQ94 594 aaKnown RBP27.59■■■□□ 2.01
TDP1-205ENST00000553527 SEPT4O43236 478 aa27.58■■■□□ 2.01
TDP1-205ENST00000553527 DHX16O60231 1041 aaKnown RBP27.58■■■□□ 2.01
TDP1-205ENST00000553527 CNPY2Q9Y2B0 182 aa27.58■■■□□ 2.01
TDP1-205ENST00000553527 SLC27A2O14975 620 aa27.57■■■□□ 2
TDP1-205ENST00000553527 ASPRV1Q53RT3 343 aa27.57■■■□□ 2
TDP1-205ENST00000553527 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.57■■■□□ 2
TDP1-205ENST00000553527 SENP2Q9HC62 589 aa27.57■■■□□ 2
TDP1-205ENST00000553527 WTAPQ15007 396 aa27.56■■■□□ 2
TDP1-205ENST00000553527 SART3Q15020 963 aaKnown RBP27.56■■■□□ 2
TDP1-205ENST00000553527 CREB3L3Q68CJ9 461 aa27.56■■■□□ 2
TDP1-205ENST00000553527 ZHX1Q9UKY1 873 aaPredicted RBP27.56■■■□□ 2
TDP1-205ENST00000553527 ALPK3Q96L96 1907 aa27.55■■■□□ 2
TDP1-205ENST00000553527 EVI5O60447 810 aa27.55■■■□□ 2
TDP1-205ENST00000553527 SNAI1O95863 264 aaPredicted RBP27.55■■■□□ 2
TDP1-205ENST00000553527 USH1GQ495M9 461 aa27.55■■■□□ 2
TDP1-205ENST00000553527 TMEM67Q5HYA8 995 aa27.55■■■□□ 2
TDP1-205ENST00000553527 GJC2Q5T442 439 aaPredicted RBP27.55■■■□□ 2
TDP1-205ENST00000553527 ADGRF4Q8IZF3 695 aa27.55■■■□□ 2
TDP1-205ENST00000553527 STAG2Q8N3U4 1231 aa27.55■■■□□ 2
TDP1-205ENST00000553527 FGD4Q96M96 766 aa27.55■■■□□ 2
TDP1-205ENST00000553527 H0YGN5 161 aa27.54■■■□□ 2
TDP1-205ENST00000553527 PFASO15067 1338 aa27.54■■■□□ 2
TDP1-205ENST00000553527 ZNF865P0CJ78 1059 aaPredicted RBP27.54■■■□□ 2
TDP1-205ENST00000553527 NECTIN1Q15223 517 aa27.54■■■□□ 2
TDP1-205ENST00000553527 MAMDC4Q6UXC1 1216 aa27.54■■■□□ 2
TDP1-205ENST00000553527 ZNF467Q7Z7K2 595 aaPredicted RBP27.54■■■□□ 2
TDP1-205ENST00000553527 MB21D2Q8IYB1 491 aaPredicted RBP27.54■■■□□ 2
TDP1-205ENST00000553527 MSL3Q8N5Y2 521 aaKnown RBP27.54■■■□□ 2
TDP1-205ENST00000553527 FAM133AQ8N9E0 248 aa27.54■■■□□ 2
TDP1-205ENST00000553527 SYNGAP1Q96PV0 1343 aa27.54■■■□□ 2
TDP1-205ENST00000553527 PURBQ96QR8 312 aaKnown RBP27.54■■■□□ 2
TDP1-205ENST00000553527 CYP39A1Q9NYL5 469 aa27.54■■■□□ 2
TDP1-205ENST00000553527 NRBP1Q9UHY1 535 aa27.54■■■□□ 2
TDP1-205ENST00000553527 PTPDC1A2A3K4 754 aa27.53■■■□□ 2
TDP1-205ENST00000553527 SOWAHBA6NEL2 793 aa27.53■■■□□ 2
TDP1-205ENST00000553527 NFIBO00712 420 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms