RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 SNW1Q13573 536 aaKnown RBP8.39□□□□□ -1.07
ATXN3-221ENST00000553498 GRIK5Q16478 980 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 PFKFB3Q16875 520 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-221ENST00000553498 USP17L1Q7RTZ2 530 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 RAB11FIP4Q86YS3 637 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 FMR1NBQ8N0W7 255 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-221ENST00000553498 FAM43AQ8N2R8 423 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 FSIP1Q8NA03 581 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 CCDC148Q8NFR7 591 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 GPR101Q96P66 508 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-221ENST00000553498 PSMD1Q99460 953 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 PYM1Q9BRP8 204 aaKnown RBP8.39□□□□□ -1.07
ATXN3-221ENST00000553498 IDI2Q9BXS1 227 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 PANK2Q9BZ23 570 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 NAT10Q9H0A0 1025 aaKnown RBP8.39□□□□□ -1.07
ATXN3-221ENST00000553498 CLIC4Q9Y696 253 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 LTBP1Q14766 1721 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 KIAA1551Q9HCM1 1747 aa8.39□□□□□ -1.07
ATXN3-221ENST00000553498 CNTNAP5Q8WYK1 1306 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 TNFRSF10AO00220 468 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 DTNBO60941 627 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 F12P00748 615 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-221ENST00000553498 TPM3P06753 285 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 PLCD1P51178 756 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 CEBPZQ03701 1054 aaKnown RBP8.38□□□□□ -1.07
ATXN3-221ENST00000553498 TYRO3Q06418 890 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 KCNH2Q12809 1159 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 PTPAQ15257 358 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 ZRSR1Q15695 479 aaKnown RBP8.38□□□□□ -1.07
ATXN3-221ENST00000553498 PKN1Q16512 942 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 CCDC93Q567U6 631 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 FAM47AQ5JRC9 791 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 DACT2Q5SW24 774 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 AXDND1Q5T1B0 1012 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-221ENST00000553498 PPP2R2DQ66LE6 453 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 OTUD7BQ6GQQ9 843 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 STK11IPQ8N1F8 1099 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 CERS5Q8N5B7 392 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 TTLL6Q8N841 843 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 SPZ1Q9BXG8 430 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 IL17RBQ9NRM6 502 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 USP40Q9NVE5 1235 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 ANO10Q9NW15 660 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 FAM13BQ9NYF5 915 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 SERPINB13Q9UIV8 391 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 SYNPO2Q9UMS6 1093 aa8.38□□□□□ -1.07
ATXN3-221ENST00000553498 SNED1Q8TER0 1413 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 TNS1Q9HBL0 1735 aaKnown RBP8.37□□□□□ -1.07
ATXN3-221ENST00000553498 PALM3A6NDB9 673 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-221ENST00000553498 TRIM75PA6NK02 468 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 BTBD18B2RXH4 712 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 ECE2O60344 883 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 ENTPD3O75355 529 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 WDHD1O75717 1129 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-221ENST00000553498 GUCY1A2P33402 732 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 CRKP46108 304 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 TGFB2P61812 414 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 ORC2Q13416 577 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-221ENST00000553498 STX1AQ16623 288 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 RESP18Q5W5W9 173 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 MSL1Q68DK7 614 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 APOBEC3HQ6NTF7 200 aaKnown RBP8.37□□□□□ -1.07
ATXN3-221ENST00000553498 KANK3Q6NY19 840 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 FOXP4Q8IVH2 680 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-221ENST00000553498 TEX2Q8IWB9 1127 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 SRBD1Q8N5C6 995 aaKnown RBP8.37□□□□□ -1.07
ATXN3-221ENST00000553498 DAGLBQ8NCG7 672 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 FERMT2Q96AC1 680 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 DYNLL2Q96FJ2 89 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 AIFM3Q96NN9 605 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 TMEM47Q9BQJ4 181 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 SDF4Q9BRK5 362 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 OSBPL5Q9H0X9 879 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-221ENST00000553498 GOPCQ9HD26 462 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 TOR4AQ9NXH8 423 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 CCDC39Q9UFE4 941 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 USP25Q9UHP3 1055 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 STX8Q9UNK0 236 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 HPSEQ9Y251 543 aa8.37□□□□□ -1.07
ATXN3-221ENST00000553498 SRPRBQ9Y5M8 271 aaKnown RBP8.37□□□□□ -1.07
ATXN3-221ENST00000553498 COL2A1P02458 1487 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-221ENST00000553498 IGKV6D-41A0A0C4DH26 115 aa8.36□□□□□ -1.07
ATXN3-221ENST00000553498 WNT7AO00755 349 aa8.36□□□□□ -1.07
ATXN3-221ENST00000553498 PLEKHA8P1O95397 391 aa8.36□□□□□ -1.07
ATXN3-221ENST00000553498 PARP1P09874 1014 aaKnown RBP8.36□□□□□ -1.07
ATXN3-221ENST00000553498 SYKP43405 635 aa8.36□□□□□ -1.07
ATXN3-221ENST00000553498 FOXC1Q12948 553 aa8.36□□□□□ -1.07
ATXN3-221ENST00000553498 ASPRV1Q53RT3 343 aa8.36□□□□□ -1.07
ATXN3-221ENST00000553498 CDC42EP5Q6NZY7 148 aa8.36□□□□□ -1.07
ATXN3-221ENST00000553498 BPIFA3Q9BQP9 254 aa8.36□□□□□ -1.07
ATXN3-221ENST00000553498 FTOQ9C0B1 505 aaKnown RBP eCLIP8.36□□□□□ -1.07
ATXN3-221ENST00000553498 UNC93B1Q9H1C4 597 aa8.36□□□□□ -1.07
ATXN3-221ENST00000553498 MTMR4Q9NYA4 1195 aa8.36□□□□□ -1.07
ATXN3-221ENST00000553498 PI4KBQ9UBF8 816 aa8.36□□□□□ -1.07
ATXN3-221ENST00000553498 SAP30BPQ9UHR5 308 aaKnown RBP8.36□□□□□ -1.07
ATXN3-221ENST00000553498 MAD2L2Q9UI95 211 aa8.36□□□□□ -1.07
ATXN3-221ENST00000553498 PCDHA4Q9UN74 947 aa8.36□□□□□ -1.07
ATXN3-221ENST00000553498 MRVI1Q9Y6F6 885 aa8.36□□□□□ -1.07
ATXN3-221ENST00000553498 ESYT2A0FGR8 921 aa8.35□□□□□ -1.07
ATXN3-221ENST00000553498 GOLGA6L6A8MZA4 724 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms