RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 TMEM47Q9BQJ4 181 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 PCDHA6Q9UN73 950 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 PCDHA8Q9Y5H6 950 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 PLIN4Q96Q06 1357 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 ARFGEF1Q9Y6D6 1849 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 GAKO14976 1311 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 ESYT2A0FGR8 921 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 H7C1D1 291 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 RPN1P04843 607 aaKnown RBP14.57□□□□□ -0.08
SHMT2-205ENST00000553474 KCNA3P22001 575 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 BTDP43251 543 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 STIM1Q13586 685 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 TUBB2AQ13885 445 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 IL17AQ16552 155 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 WWC2Q6AWC2 1192 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 KLHL10Q6JEL2 608 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 STAG2Q8N3U4 1231 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 IGSF22Q8N9C0 903 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 DYNLL2Q96FJ2 89 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 SYT17Q9BSW7 474 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 TUBB2BQ9BVA1 445 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 C6orf50Q9HD87 102 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 PIM2Q9P1W9 311 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 DDX41Q9UJV9 622 aaKnown RBP14.57□□□□□ -0.08
SHMT2-205ENST00000553474 STX8Q9UNK0 236 aa14.57□□□□□ -0.08
SHMT2-205ENST00000553474 GOLGB1Q14789 3259 aaKnown RBP14.56□□□□□ -0.08
SHMT2-205ENST00000553474 FAM205AQ6ZU69 1335 aa14.56□□□□□ -0.08
SHMT2-205ENST00000553474 EFCAB8A8MWE9 144 aa14.56□□□□□ -0.08
SHMT2-205ENST00000553474 KLRF2D3W0D1 207 aa14.56□□□□□ -0.08
SHMT2-205ENST00000553474 UFL1O94874 794 aa14.56□□□□□ -0.08
SHMT2-205ENST00000553474 PARP1P09874 1014 aaKnown RBP14.56□□□□□ -0.08
SHMT2-205ENST00000553474 UBA7P41226 1012 aa14.56□□□□□ -0.08
SHMT2-205ENST00000553474 TUBB4BP68371 445 aa14.56□□□□□ -0.08
SHMT2-205ENST00000553474 DIXDC1Q155Q3 683 aa14.56□□□□□ -0.08
SHMT2-205ENST00000553474 RRAGBQ5VZM2 374 aa14.56□□□□□ -0.08
SHMT2-205ENST00000553474 TTLL6Q8N841 843 aa14.56□□□□□ -0.08
SHMT2-205ENST00000553474 LTBP1Q14766 1721 aa14.56□□□□□ -0.08
SHMT2-205ENST00000553474 SNED1Q8TER0 1413 aa14.56□□□□□ -0.08
SHMT2-205ENST00000553474 USP17L3A6NCW0 530 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 USP17L4A6NCW7 530 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 CYTH3O43739 400 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 MFAP3LO75121 409 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 CDK8P49336 464 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 ADKP55263 362 aaKnown RBP14.55□□□□□ -0.08
SHMT2-205ENST00000553474 GPSM2P81274 684 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 HSP90AA4PQ58FG1 418 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 USP17L1Q7RTZ2 530 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 HEATR3Q7Z4Q2 680 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 TEX11Q8IYF3 940 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 NOC3LQ8WTT2 800 aaKnown RBP14.55□□□□□ -0.08
SHMT2-205ENST00000553474 GPKOWQ92917 476 aaPredicted RBP eCLIP14.55□□□□□ -0.08
SHMT2-205ENST00000553474 CCDC47Q96A33 483 aaKnown RBP14.55□□□□□ -0.08
SHMT2-205ENST00000553474 RRP36Q96EU6 259 aaKnown RBP14.55□□□□□ -0.08
SHMT2-205ENST00000553474 EYA3Q99504 573 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 MTRQ99707 1265 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 KBTBD4Q9NVX7 518 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 SEC63Q9UGP8 760 aaKnown RBP14.55□□□□□ -0.08
SHMT2-205ENST00000553474 CTNND2Q9UQB3 1225 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 BCS1LQ9Y276 419 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 FLT1P17948 1338 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 MYO3BQ8WXR4 1341 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 MYH8P13535 1937 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 VEGFAP15692 232 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-205ENST00000553474 EEF1GP26641 437 aaKnown RBP14.55□□□□□ -0.08
SHMT2-205ENST00000553474 CASQ1P31415 396 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 NONOQ15233 471 aaKnown RBP eCLIP14.55□□□□□ -0.08
SHMT2-205ENST00000553474 ELF2Q15723 593 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 DALRD3Q5D0E6 543 aaKnown RBP14.55□□□□□ -0.08
SHMT2-205ENST00000553474 TMTC1Q8IUR5 882 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 MNS1Q8NEH6 495 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 ARGLU1Q9NWB6 273 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-205ENST00000553474 JAG2Q9Y219 1238 aa14.55□□□□□ -0.08
SHMT2-205ENST00000553474 TEX33O43247 280 aa14.54□□□□□ -0.08
SHMT2-205ENST00000553474 C21orf2O43822 256 aa14.54□□□□□ -0.08
SHMT2-205ENST00000553474 RHOBTB3O94955 611 aa14.54□□□□□ -0.08
SHMT2-205ENST00000553474 H2AFXP16104 143 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-205ENST00000553474 TCP11X2Q5H9J9 407 aa14.54□□□□□ -0.08
SHMT2-205ENST00000553474 TYW1BQ6NUM6 668 aa14.54□□□□□ -0.08
SHMT2-205ENST00000553474 RASGRP2Q7LDG7 609 aa14.54□□□□□ -0.08
SHMT2-205ENST00000553474 MAPKAPK5Q8IW41 473 aa14.54□□□□□ -0.08
SHMT2-205ENST00000553474 ADSSL1Q8N142 457 aa14.54□□□□□ -0.08
SHMT2-205ENST00000553474 NELFBQ8WX92 580 aa14.54□□□□□ -0.08
SHMT2-205ENST00000553474 UBXN4Q92575 508 aa14.54□□□□□ -0.08
SHMT2-205ENST00000553474 TMX4Q9H1E5 349 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-205ENST00000553474 TTF2Q9UNY4 1162 aaKnown RBP14.54□□□□□ -0.08
SHMT2-205ENST00000553474 N4BP3O15049 544 aa14.53□□□□□ -0.08
SHMT2-205ENST00000553474 NAPAP54920 295 aa14.53□□□□□ -0.08
SHMT2-205ENST00000553474 STX17P56962 302 aa14.53□□□□□ -0.08
SHMT2-205ENST00000553474 RHBDL3P58872 404 aa14.53□□□□□ -0.08
SHMT2-205ENST00000553474 MAP3K9P80192 1104 aa14.53□□□□□ -0.08
SHMT2-205ENST00000553474 AMPD3Q01432 767 aa14.53□□□□□ -0.08
SHMT2-205ENST00000553474 RBL2Q08999 1139 aa14.53□□□□□ -0.08
SHMT2-205ENST00000553474 KRT31Q15323 416 aa14.53□□□□□ -0.08
SHMT2-205ENST00000553474 KMT5BQ4FZB7 885 aa14.53□□□□□ -0.08
SHMT2-205ENST00000553474 MFSD14BQ5SR56 506 aa14.53□□□□□ -0.08
SHMT2-205ENST00000553474 SOGA3Q5TF21 947 aa14.53□□□□□ -0.08
SHMT2-205ENST00000553474 THAP9Q9H5L6 903 aa14.53□□□□□ -0.08
SHMT2-205ENST00000553474 MYO1AQ9UBC5 1043 aa14.53□□□□□ -0.08
SHMT2-205ENST00000553474 A0A1W2PQC6 194 aa14.52□□□□□ -0.08
SHMT2-205ENST00000553474 PSMA7O14818 248 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms