RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 COL11A1P12107 1806 aaPredicted RBP11.15□□□□□ -0.62
CHD8-203ENST00000553283 MYADML2A6NDP7 307 aa11.15□□□□□ -0.62
CHD8-203ENST00000553283 TIMP1P01033 207 aa11.15□□□□□ -0.62
CHD8-203ENST00000553283 C6orf222P0C671 652 aaPredicted RBP11.15□□□□□ -0.62
CHD8-203ENST00000553283 CDK7P50613 346 aa11.15□□□□□ -0.62
CHD8-203ENST00000553283 GJA9P57773 515 aa11.15□□□□□ -0.62
CHD8-203ENST00000553283 PPARAQ07869 468 aa11.15□□□□□ -0.62
CHD8-203ENST00000553283 CCDC144BQ3MJ40 725 aa11.15□□□□□ -0.62
CHD8-203ENST00000553283 PPP4R3BQ5MIZ7 849 aa11.15□□□□□ -0.62
CHD8-203ENST00000553283 ZMYM1Q5SVZ6 1142 aa11.15□□□□□ -0.62
CHD8-203ENST00000553283 ARMCX2Q7L311 632 aa11.15□□□□□ -0.62
CHD8-203ENST00000553283 PI4K2BQ8TCG2 481 aa11.15□□□□□ -0.62
CHD8-203ENST00000553283 CHURC1Q8WUH1 139 aa11.15□□□□□ -0.62
CHD8-203ENST00000553283 STAG1Q8WVM7 1258 aa11.15□□□□□ -0.62
CHD8-203ENST00000553283 GMCL1Q96IK5 515 aa11.15□□□□□ -0.62
CHD8-203ENST00000553283 GLT1D1Q96MS3 346 aa11.15□□□□□ -0.62
CHD8-203ENST00000553283 FSD1Q9BTV5 496 aa11.15□□□□□ -0.62
CHD8-203ENST00000553283 NAPBQ9H115 298 aa11.15□□□□□ -0.62
CHD8-203ENST00000553283 UPF3AQ9H1J1 476 aaKnown RBP11.15□□□□□ -0.62
CHD8-203ENST00000553283 SPC25Q9HBM1 224 aa11.15□□□□□ -0.62
CHD8-203ENST00000553283 PCDHB15Q9Y5E8 787 aa11.15□□□□□ -0.62
CHD8-203ENST00000553283 PLIN4Q96Q06 1357 aa11.15□□□□□ -0.63
CHD8-203ENST00000553283 TMEM265A0A087WTH1 108 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.14□□□□□ -0.63
CHD8-203ENST00000553283 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.14□□□□□ -0.63
CHD8-203ENST00000553283 ADCY6O43306 1168 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 PLA2G6O60733 806 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 ASGR1P07306 291 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 MCCP23508 829 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 SLC1A4P43007 532 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 STAT2P52630 851 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 NKX3-2P78367 333 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 IRX5P78411 483 aaPredicted RBP11.14□□□□□ -0.63
CHD8-203ENST00000553283 CNTN2Q02246 1040 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 TKFCQ3LXA3 575 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 GNASQ5JWF2 1037 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 MFSD5Q6N075 450 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 FAM160B2Q86V87 743 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 CCDC144CPQ8IYA2 1237 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 FAM133AQ8N9E0 248 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 OTUD7AQ8TE49 926 aaPredicted RBP11.14□□□□□ -0.63
CHD8-203ENST00000553283 VTI1AQ96AJ9 217 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 AGBL1Q96MI9 1066 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 COL25A1Q9BXS0 654 aaPredicted RBP11.14□□□□□ -0.63
CHD8-203ENST00000553283 KATNBL1Q9H079 304 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 ACAD9Q9H845 621 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 HOMER2Q9NSB8 354 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 TBX21Q9UL17 535 aa11.14□□□□□ -0.63
CHD8-203ENST00000553283 ZNF536O15090 1300 aa11.13□□□□□ -0.63
CHD8-203ENST00000553283 MROH7Q68CQ1 1323 aa11.13□□□□□ -0.63
CHD8-203ENST00000553283 A0A0U1RQG5 324 aaPredicted RBP11.13□□□□□ -0.63
CHD8-203ENST00000553283 ARVCFO00192 962 aa11.13□□□□□ -0.63
CHD8-203ENST00000553283 CTAGE5O15320 804 aa11.13□□□□□ -0.63
CHD8-203ENST00000553283 RCSD1Q6JBY9 416 aa11.13□□□□□ -0.63
CHD8-203ENST00000553283 MAFAQ8NHW3 353 aaPredicted RBP11.13□□□□□ -0.63
CHD8-203ENST00000553283 MYLIPQ8WY64 445 aa11.13□□□□□ -0.63
CHD8-203ENST00000553283 A1CFQ9NQ94 594 aaKnown RBP11.13□□□□□ -0.63
CHD8-203ENST00000553283 IL17RBQ9NRM6 502 aa11.13□□□□□ -0.63
CHD8-203ENST00000553283 RNF146Q9NTX7 359 aa11.13□□□□□ -0.63
CHD8-203ENST00000553283 ISY1Q9ULR0 285 aaKnown RBP11.13□□□□□ -0.63
CHD8-203ENST00000553283 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.13□□□□□ -0.63
CHD8-203ENST00000553283 PLXNA1Q9UIW2 1896 aa11.12□□□□□ -0.63
CHD8-203ENST00000553283 SOWAHBA6NEL2 793 aa11.12□□□□□ -0.63
CHD8-203ENST00000553283 ASB14A6NK59 587 aa11.12□□□□□ -0.63
CHD8-203ENST00000553283 TSPY2A6NKD2 308 aa11.12□□□□□ -0.63
CHD8-203ENST00000553283 FOXP2O15409 715 aa11.12□□□□□ -0.63
CHD8-203ENST00000553283 MX1P20591 662 aa11.12□□□□□ -0.63
CHD8-203ENST00000553283 TNFAIP2Q03169 654 aa11.12□□□□□ -0.63
CHD8-203ENST00000553283 CTDSPL2Q05D32 466 aa11.12□□□□□ -0.63
CHD8-203ENST00000553283 IKQ13123 557 aaPredicted RBP11.12□□□□□ -0.63
CHD8-203ENST00000553283 PPIGQ13427 754 aaKnown RBP eCLIP11.12□□□□□ -0.63
CHD8-203ENST00000553283 C16orf59Q7L2K0 433 aa11.12□□□□□ -0.63
CHD8-203ENST00000553283 CHMP4CQ96CF2 233 aa11.12□□□□□ -0.63
CHD8-203ENST00000553283 TRERF1Q96PN7 1200 aa11.12□□□□□ -0.63
CHD8-203ENST00000553283 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.12□□□□□ -0.632e-10■■□□□ 12.4
CHD8-203ENST00000553283 INCENPQ9NQS7 918 aa11.12□□□□□ -0.63
CHD8-203ENST00000553283 STX8Q9UNK0 236 aa11.12□□□□□ -0.63
CHD8-203ENST00000553283 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.11□□□□□ -0.63
CHD8-203ENST00000553283 TLR3O15455 904 aaKnown RBP11.11□□□□□ -0.63
CHD8-203ENST00000553283 NMT2O60551 498 aa11.11□□□□□ -0.63
CHD8-203ENST00000553283 ALAS1P13196 640 aa11.11□□□□□ -0.63
CHD8-203ENST00000553283 FOSL2P15408 326 aa11.11□□□□□ -0.63
CHD8-203ENST00000553283 NOVP48745 357 aa11.11□□□□□ -0.63
CHD8-203ENST00000553283 BEX3Q00994 111 aa11.11□□□□□ -0.63
CHD8-203ENST00000553283 CCDC174Q6PII3 467 aa11.11□□□□□ -0.63
CHD8-203ENST00000553283 CCDC129Q6ZRS4 1044 aa11.11□□□□□ -0.63
CHD8-203ENST00000553283 KCTD1Q719H9 257 aa11.11□□□□□ -0.63
CHD8-203ENST00000553283 NOL8Q76FK4 1167 aaKnown RBP11.11□□□□□ -0.63
CHD8-203ENST00000553283 FAM126BQ8IXS8 530 aa11.11□□□□□ -0.63
CHD8-203ENST00000553283 TMEM199Q8N511 208 aa11.11□□□□□ -0.63
CHD8-203ENST00000553283 ANAPC4Q9UJX5 808 aa11.11□□□□□ -0.63
CHD8-203ENST00000553283 PRR12Q9ULL5 1215 aa11.11□□□□□ -0.63
CHD8-203ENST00000553283 GNEQ9Y223 722 aaKnown RBP11.11□□□□□ -0.63
CHD8-203ENST00000553283 ASTN1O14525 1302 aa11.1□□□□□ -0.63
CHD8-203ENST00000553283 TTC28Q96AY4 2481 aa11.1□□□□□ -0.63
CHD8-203ENST00000553283 ORC4O43929 436 aa11.1□□□□□ -0.63
CHD8-203ENST00000553283 RANBP6O60518 1105 aaKnown RBP11.1□□□□□ -0.63
CHD8-203ENST00000553283 CABYRO75952 493 aa11.1□□□□□ -0.63
CHD8-203ENST00000553283 CD4P01730 458 aa11.1□□□□□ -0.63
CHD8-203ENST00000553283 FGRP09769 529 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms