RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 TMEM39AQ9NV64 488 aa10.36□□□□□ -0.75
TMEM116-217ENST00000552801 CLIP2Q9UDT6 1046 aa10.36□□□□□ -0.75
TMEM116-217ENST00000552801 FBXO40Q9UH90 709 aa10.36□□□□□ -0.75
TMEM116-217ENST00000552801 FAM184BQ9ULE4 1060 aa10.36□□□□□ -0.75
TMEM116-217ENST00000552801 MYH4Q9Y623 1939 aa10.35□□□□□ -0.75
TMEM116-217ENST00000552801 PARP14Q460N5 1801 aa10.35□□□□□ -0.75
TMEM116-217ENST00000552801 MROH7Q68CQ1 1323 aa10.35□□□□□ -0.75
TMEM116-217ENST00000552801 F5H6K3 240 aa10.35□□□□□ -0.75
TMEM116-217ENST00000552801 ERC2O15083 957 aa10.35□□□□□ -0.75
TMEM116-217ENST00000552801 RNF113AO15541 343 aaKnown RBP10.35□□□□□ -0.75
TMEM116-217ENST00000552801 TSPY3P0CV98 308 aa10.35□□□□□ -0.75
TMEM116-217ENST00000552801 TSPY8P0CW00 308 aa10.35□□□□□ -0.75
TMEM116-217ENST00000552801 HOXB1P14653 301 aaPredicted RBP10.35□□□□□ -0.75
TMEM116-217ENST00000552801 TLE2Q04725 743 aa10.35□□□□□ -0.75
TMEM116-217ENST00000552801 KLRC3Q07444 240 aa10.35□□□□□ -0.75
TMEM116-217ENST00000552801 SHHQ15465 462 aa10.35□□□□□ -0.75
TMEM116-217ENST00000552801 PPP4R3BQ5MIZ7 849 aa10.35□□□□□ -0.75
TMEM116-217ENST00000552801 LCE2DQ5TA82 110 aaPredicted RBP10.35□□□□□ -0.75
TMEM116-217ENST00000552801 SIAH1Q8IUQ4 282 aa10.35□□□□□ -0.75
TMEM116-217ENST00000552801 MSL3Q8N5Y2 521 aaKnown RBP10.35□□□□□ -0.75
TMEM116-217ENST00000552801 KBTBD3Q8NAB2 608 aa10.35□□□□□ -0.75
TMEM116-217ENST00000552801 GLT1D1Q96MS3 346 aa10.35□□□□□ -0.75
TMEM116-217ENST00000552801 STRBPQ96SI9 672 aaKnown RBP10.35□□□□□ -0.75
TMEM116-217ENST00000552801 NUP88Q99567 741 aaPredicted RBP10.35□□□□□ -0.75
TMEM116-217ENST00000552801 PDLIM7Q9NR12 457 aa10.35□□□□□ -0.75
TMEM116-217ENST00000552801 NYAP2Q9P242 653 aa10.35□□□□□ -0.75
TMEM116-217ENST00000552801 PHF24Q9UPV7 400 aa10.35□□□□□ -0.75
TMEM116-217ENST00000552801 SMCHD1A6NHR9 2005 aa10.35□□□□□ -0.75
TMEM116-217ENST00000552801 RANBP2P49792 3224 aaKnown RBP10.34□□□□□ -0.75
TMEM116-217ENST00000552801 LTBP2Q14767 1821 aa10.34□□□□□ -0.75
TMEM116-217ENST00000552801 A0A1W2PQ45 241 aaPredicted RBP10.34□□□□□ -0.75
TMEM116-217ENST00000552801 A0A1W2PQY0 241 aa10.34□□□□□ -0.75
TMEM116-217ENST00000552801 TTLL1O95922 423 aa10.34□□□□□ -0.75
TMEM116-217ENST00000552801 NDUFB10O96000 172 aa10.34□□□□□ -0.75
TMEM116-217ENST00000552801 FPGSQ05932 587 aa10.34□□□□□ -0.75
TMEM116-217ENST00000552801 ZNF792Q3KQV3 632 aa10.34□□□□□ -0.75
TMEM116-217ENST00000552801 SBK1Q52WX2 424 aa10.34□□□□□ -0.75
TMEM116-217ENST00000552801 ARSIQ5FYB1 569 aa10.34□□□□□ -0.75
TMEM116-217ENST00000552801 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.34□□□□□ -0.75
TMEM116-217ENST00000552801 PCSK9Q8NBP7 692 aaKnown RBP10.34□□□□□ -0.75
TMEM116-217ENST00000552801 TSEN34Q9BSV6 310 aaKnown RBP10.34□□□□□ -0.75
TMEM116-217ENST00000552801 NAPBQ9H115 298 aa10.34□□□□□ -0.75
TMEM116-217ENST00000552801 FEM1BQ9UK73 627 aa10.34□□□□□ -0.75
TMEM116-217ENST00000552801 ADAMTS5Q9UNA0 930 aa10.34□□□□□ -0.75
TMEM116-217ENST00000552801 SZT2Q5T011 3432 aa10.34□□□□□ -0.75
TMEM116-217ENST00000552801 SYNGAP1Q96PV0 1343 aa10.33□□□□□ -0.76
TMEM116-217ENST00000552801 MOXD2PA6NHM9 499 aa10.33□□□□□ -0.76
TMEM116-217ENST00000552801 TLR3O15455 904 aaKnown RBP10.33□□□□□ -0.76
TMEM116-217ENST00000552801 GPAA1O43292 621 aa10.33□□□□□ -0.76
TMEM116-217ENST00000552801 C6orf222P0C671 652 aaPredicted RBP10.33□□□□□ -0.76
TMEM116-217ENST00000552801 SMAD3P84022 425 aaKnown RBP10.33□□□□□ -0.76
TMEM116-217ENST00000552801 SNX17Q15036 470 aa10.33□□□□□ -0.76
TMEM116-217ENST00000552801 C1orf53Q5VUE5 145 aa10.33□□□□□ -0.76
TMEM116-217ENST00000552801 PTCD2Q8WV60 388 aaKnown RBP10.33□□□□□ -0.76
TMEM116-217ENST00000552801 FSD1Q9BTV5 496 aa10.33□□□□□ -0.76
TMEM116-217ENST00000552801 RAVER2Q9HCJ3 691 aaKnown RBP10.33□□□□□ -0.76
TMEM116-217ENST00000552801 HOMER2Q9NSB8 354 aa10.33□□□□□ -0.76
TMEM116-217ENST00000552801 ZNF214Q9UL59 606 aaPredicted RBP10.33□□□□□ -0.76
TMEM116-217ENST00000552801 PCDHGA4Q9Y5G9 962 aa10.33□□□□□ -0.76
TMEM116-217ENST00000552801 GSG1L2A8MUP6 293 aa10.32□□□□□ -0.76
TMEM116-217ENST00000552801 PRDM1O75626 825 aa10.32□□□□□ -0.76
TMEM116-217ENST00000552801 CHGBP05060 677 aa10.32□□□□□ -0.76
TMEM116-217ENST00000552801 FDX1P10109 184 aa10.32□□□□□ -0.76
TMEM116-217ENST00000552801 BMP3P12645 472 aa10.32□□□□□ -0.76
TMEM116-217ENST00000552801 FOSL2P15408 326 aa10.32□□□□□ -0.76
TMEM116-217ENST00000552801 TAL1P17542 331 aaPredicted RBP10.32□□□□□ -0.76
TMEM116-217ENST00000552801 RASA1P20936 1047 aa10.32□□□□□ -0.76
TMEM116-217ENST00000552801 ACLYP53396 1101 aa10.32□□□□□ -0.76
TMEM116-217ENST00000552801 C9orf50Q5SZB4 431 aa10.32□□□□□ -0.76
TMEM116-217ENST00000552801 SLFN13Q68D06 897 aa10.32□□□□□ -0.76
TMEM116-217ENST00000552801 CCDC129Q6ZRS4 1044 aa10.32□□□□□ -0.76
TMEM116-217ENST00000552801 SH3RF1Q7Z6J0 888 aa10.32□□□□□ -0.76
TMEM116-217ENST00000552801 LRRC47Q8N1G4 583 aaKnown RBP10.32□□□□□ -0.76
TMEM116-217ENST00000552801 CHST13Q8NET6 341 aa10.32□□□□□ -0.76
TMEM116-217ENST00000552801 MAFAQ8NHW3 353 aaPredicted RBP10.32□□□□□ -0.76
TMEM116-217ENST00000552801 CHURC1Q8WUH1 139 aa10.32□□□□□ -0.76
TMEM116-217ENST00000552801 MARVELD3Q96A59 401 aa10.32□□□□□ -0.76
TMEM116-217ENST00000552801 CEP95Q96GE4 821 aa10.32□□□□□ -0.76
TMEM116-217ENST00000552801 ABHD16BQ9H3Z7 469 aa10.32□□□□□ -0.76
TMEM116-217ENST00000552801 PPP4R2Q9NY27 417 aa10.32□□□□□ -0.76
TMEM116-217ENST00000552801 SYNRGQ9UMZ2 1314 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 TRIM43BA6NCK2 446 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 TSPY2A6NKD2 308 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 PATL2C9JE40 543 aaKnown RBP10.31□□□□□ -0.76
TMEM116-217ENST00000552801 SMIM22K7EJ46 135 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 ZEB2O60315 1214 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 DUSP11O75319 330 aaKnown RBP10.31□□□□□ -0.76
TMEM116-217ENST00000552801 IGHA2P01877 340 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 ZNF865P0CJ78 1059 aaPredicted RBP10.31□□□□□ -0.76
TMEM116-217ENST00000552801 SLC1A4P43007 532 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 STAT2P52630 851 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 OAZ1P54368 228 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 PPIGQ13427 754 aaKnown RBP eCLIP10.31□□□□□ -0.76
TMEM116-217ENST00000552801 ACVR2BQ13705 512 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 KCNA10Q16322 511 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 GNASQ5JWF2 1037 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 TSHZ3Q63HK5 1081 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 FAM160B2Q86V87 743 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 OSBP2Q969R2 916 aa10.31□□□□□ -0.76
TMEM116-217ENST00000552801 TRIM43Q96BQ3 446 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms