RNA–Protein interactions for RNA: ENST00000552487.1

ATF1-204, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-204ENST00000552487 ACVR2BQ13705 512 aa13.05□□□□□ -0.32
ATF1-204ENST00000552487 ALX1Q15699 326 aa13.05□□□□□ -0.32
ATF1-204ENST00000552487 LRIT3Q3SXY7 679 aa13.05□□□□□ -0.32
ATF1-204ENST00000552487 TRIM60Q495X7 471 aa13.05□□□□□ -0.32
ATF1-204ENST00000552487 GPR153Q6NV75 609 aa13.05□□□□□ -0.32
ATF1-204ENST00000552487 KCTD1Q719H9 257 aa13.05□□□□□ -0.32
ATF1-204ENST00000552487 CHD1LQ86WJ1 897 aa13.05□□□□□ -0.32
ATF1-204ENST00000552487 IQCA1Q86XH1 822 aa13.05□□□□□ -0.32
ATF1-204ENST00000552487 DEFB123Q8N688 67 aa13.05□□□□□ -0.32
ATF1-204ENST00000552487 ESR2Q92731 530 aa13.05□□□□□ -0.32
ATF1-204ENST00000552487 TRERF1Q96PN7 1200 aa13.05□□□□□ -0.32
ATF1-204ENST00000552487 AP5M1Q9H0R1 490 aa13.05□□□□□ -0.32
ATF1-204ENST00000552487 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.05□□□□□ -0.32
ATF1-204ENST00000552487 ANAPC4Q9UJX5 808 aa13.05□□□□□ -0.32
ATF1-204ENST00000552487 MROH7Q68CQ1 1323 aa13.05□□□□□ -0.32
ATF1-204ENST00000552487 MOXD2PA6NHM9 499 aa13.04□□□□□ -0.32
ATF1-204ENST00000552487 ZNF213O14771 459 aa13.04□□□□□ -0.32
ATF1-204ENST00000552487 TLR3O15455 904 aaKnown RBP13.04□□□□□ -0.32
ATF1-204ENST00000552487 PLA2G6O60733 806 aa13.04□□□□□ -0.32
ATF1-204ENST00000552487 DUSP11O75319 330 aaKnown RBP13.04□□□□□ -0.32
ATF1-204ENST00000552487 CLTBP09497 229 aa13.04□□□□□ -0.32
ATF1-204ENST00000552487 RAG1P15918 1043 aa13.04□□□□□ -0.32
ATF1-204ENST00000552487 NMIQ13287 307 aaPredicted RBP13.04□□□□□ -0.32
ATF1-204ENST00000552487 NSMFQ6X4W1 530 aa13.04□□□□□ -0.32
ATF1-204ENST00000552487 ARMCX2Q7L311 632 aa13.04□□□□□ -0.32
ATF1-204ENST00000552487 FAM227BQ96M60 508 aa13.04□□□□□ -0.32
ATF1-204ENST00000552487 ADD3Q9UEY8 706 aaKnown RBP13.04□□□□□ -0.32
ATF1-204ENST00000552487 CTNNA3Q9UI47 895 aa13.04□□□□□ -0.32
ATF1-204ENST00000552487 PHF24Q9UPV7 400 aa13.04□□□□□ -0.32
ATF1-204ENST00000552487 RIPK3Q9Y572 518 aa13.04□□□□□ -0.32
ATF1-204ENST00000552487 A0A0G2JMZ2 1700 aa13.03□□□□□ -0.32
ATF1-204ENST00000552487 A0A0D9SFI3 127 aa13.03□□□□□ -0.32
ATF1-204ENST00000552487 A0A1W2PQ45 241 aaPredicted RBP13.03□□□□□ -0.32
ATF1-204ENST00000552487 A0A1W2PQY0 241 aa13.03□□□□□ -0.32
ATF1-204ENST00000552487 DHX16O60231 1041 aaKnown RBP13.03□□□□□ -0.32
ATF1-204ENST00000552487 FGAP02671 866 aa13.03□□□□□ -0.32
ATF1-204ENST00000552487 HAND2P61296 217 aa13.03□□□□□ -0.32
ATF1-204ENST00000552487 IMMTQ16891 758 aaKnown RBP13.03□□□□□ -0.32
ATF1-204ENST00000552487 BRDTQ58F21 947 aaPredicted RBP13.03□□□□□ -0.32
ATF1-204ENST00000552487 GNASQ5JWF2 1037 aa13.03□□□□□ -0.32
ATF1-204ENST00000552487 SYDE2Q5VT97 1194 aa13.03□□□□□ -0.32
ATF1-204ENST00000552487 MAMDC4Q6UXC1 1216 aa13.03□□□□□ -0.32
ATF1-204ENST00000552487 LRCH3Q96II8 777 aa13.03□□□□□ -0.32
ATF1-204ENST00000552487 FOXD4L1Q9NU39 408 aa13.03□□□□□ -0.32
ATF1-204ENST00000552487 TMEM39AQ9NV64 488 aa13.03□□□□□ -0.32
ATF1-204ENST00000552487 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.03□□□□□ -0.32
ATF1-204ENST00000552487 ZMYM6O95789 1325 aa13.03□□□□□ -0.32
ATF1-204ENST00000552487 PTPDC1A2A3K4 754 aa13.02□□□□□ -0.33
ATF1-204ENST00000552487 ZNF865P0CJ78 1059 aaPredicted RBP13.02□□□□□ -0.33
ATF1-204ENST00000552487 HSPD1P10809 573 aaKnown RBP13.02□□□□□ -0.33
ATF1-204ENST00000552487 TAL1P17542 331 aaPredicted RBP13.02□□□□□ -0.33
ATF1-204ENST00000552487 ACLYP53396 1101 aa13.02□□□□□ -0.33
ATF1-204ENST00000552487 TNFAIP2Q03169 654 aa13.02□□□□□ -0.33
ATF1-204ENST00000552487 TLE2Q04725 743 aa13.02□□□□□ -0.33
ATF1-204ENST00000552487 CCDC144BQ3MJ40 725 aa13.02□□□□□ -0.33
ATF1-204ENST00000552487 AKNAD1Q5T1N1 836 aa13.02□□□□□ -0.33
ATF1-204ENST00000552487 ZNF697Q5TEC3 545 aa13.02□□□□□ -0.33
ATF1-204ENST00000552487 VPS53Q5VIR6 699 aa13.02□□□□□ -0.33
ATF1-204ENST00000552487 CWC27Q6UX04 472 aaKnown RBP13.02□□□□□ -0.33
ATF1-204ENST00000552487 AGBL1Q96MI9 1066 aa13.02□□□□□ -0.33
ATF1-204ENST00000552487 TTC14Q96N46 770 aa13.02□□□□□ -0.33
ATF1-204ENST00000552487 KAT14Q9H8E8 782 aa13.02□□□□□ -0.33
ATF1-204ENST00000552487 GPCPD1Q9NPB8 672 aa13.02□□□□□ -0.33
ATF1-204ENST00000552487 PRR12Q9ULL5 1215 aa13.02□□□□□ -0.33
ATF1-204ENST00000552487 SYNRGQ9UMZ2 1314 aa13.02□□□□□ -0.33
ATF1-204ENST00000552487 DNAJC25-GNG10A0A024R161 153 aa13.01□□□□□ -0.33
ATF1-204ENST00000552487 NMT2O60551 498 aa13.01□□□□□ -0.33
ATF1-204ENST00000552487 IGHA2P01877 340 aa13.01□□□□□ -0.33
ATF1-204ENST00000552487 ICAM1P05362 532 aa13.01□□□□□ -0.33
ATF1-204ENST00000552487 SDSP20132 328 aa13.01□□□□□ -0.33
ATF1-204ENST00000552487 NUCB1Q02818 461 aa13.01□□□□□ -0.33
ATF1-204ENST00000552487 TRDNQ13061 729 aa13.01□□□□□ -0.33
ATF1-204ENST00000552487 KCNA10Q16322 511 aa13.01□□□□□ -0.33
ATF1-204ENST00000552487 GPATCH4Q5T3I0 446 aaKnown RBP13.01□□□□□ -0.33
ATF1-204ENST00000552487 C1orf53Q5VUE5 145 aa13.01□□□□□ -0.33
ATF1-204ENST00000552487 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.01□□□□□ -0.33
ATF1-204ENST00000552487 SMC5Q8IY18 1101 aa13.01□□□□□ -0.33
ATF1-204ENST00000552487 CCDC144CPQ8IYA2 1237 aa13.01□□□□□ -0.33
ATF1-204ENST00000552487 SLC17A8Q8NDX2 589 aa13.01□□□□□ -0.33
ATF1-204ENST00000552487 RUFY2Q8WXA3 655 aa13.01□□□□□ -0.33
ATF1-204ENST00000552487 UBAC1Q9BSL1 405 aa13.01□□□□□ -0.33
ATF1-204ENST00000552487 FRMPD2Q68DX3 1309 aaPredicted RBP13.01□□□□□ -0.33
ATF1-204ENST00000552487 RAD50Q92878 1312 aa13.01□□□□□ -0.33
ATF1-204ENST00000552487 SALL3Q9BXA9 1300 aa13.01□□□□□ -0.33
ATF1-204ENST00000552487 ELP1O95163 1332 aa13□□□□□ -0.33
ATF1-204ENST00000552487 A0A0U1RQG5 324 aaPredicted RBP13□□□□□ -0.33
ATF1-204ENST00000552487 SOX1O00570 391 aaPredicted RBP13□□□□□ -0.33
ATF1-204ENST00000552487 CABYRO75952 493 aa13□□□□□ -0.33
ATF1-204ENST00000552487 SNAI1O95863 264 aaPredicted RBP13□□□□□ -0.33
ATF1-204ENST00000552487 FPGSQ05932 587 aa13□□□□□ -0.33
ATF1-204ENST00000552487 SNX17Q15036 470 aa13□□□□□ -0.33
ATF1-204ENST00000552487 BADQ92934 168 aa13□□□□□ -0.33
ATF1-204ENST00000552487 LENG1Q96BZ8 264 aaPredicted RBP13□□□□□ -0.33
ATF1-204ENST00000552487 RNPC3Q96LT9 517 aaKnown RBP13□□□□□ -0.33
ATF1-204ENST00000552487 KRT23Q9C075 422 aa13□□□□□ -0.33
ATF1-204ENST00000552487 MTIF3Q9H2K0 278 aaKnown RBP13□□□□□ -0.33
ATF1-204ENST00000552487 CNNM2Q9H8M5 875 aa13□□□□□ -0.33
ATF1-204ENST00000552487 A1CFQ9NQ94 594 aaKnown RBP13□□□□□ -0.33
ATF1-204ENST00000552487 GPHNQ9NQX3 736 aaPredicted RBP13□□□□□ -0.33
ATF1-204ENST00000552487 PDLIM7Q9NR12 457 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms