RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 TSGA10IPQ3SY00 556 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 DYMQ7RTS9 669 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 ZNF668Q96K58 619 aaPredicted RBP9.29□□□□□ -0.92
CHPT1-208ENST00000552215 PPP1R16BQ96T49 567 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 BEGAINQ9BUH8 593 aa9.29□□□□□ -0.92
CHPT1-208ENST00000552215 RPAP1Q9BWH6 1393 aaPredicted RBP9.28□□□□□ -0.92
CHPT1-208ENST00000552215 DTHD1Q6ZMT9 781 aa9.28□□□□□ -0.92
CHPT1-208ENST00000552215 LDHDQ86WU2 507 aa9.28□□□□□ -0.92
CHPT1-208ENST00000552215 SLF1Q9BQI6 1058 aa9.28□□□□□ -0.92
CHPT1-208ENST00000552215 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.28□□□□□ -0.92
CHPT1-208ENST00000552215 JMJD4Q9H9V9 463 aa9.28□□□□□ -0.92
CHPT1-208ENST00000552215 CPA4Q9UI42 421 aa9.28□□□□□ -0.92
CHPT1-208ENST00000552215 MAD2L2Q9UI95 211 aa9.28□□□□□ -0.92
CHPT1-208ENST00000552215 GCOM1H8Y6P7 765 aaPredicted RBP9.28□□□□□ -0.92
CHPT1-208ENST00000552215 POLR2MP0CAP2 368 aa9.28□□□□□ -0.92
CHPT1-208ENST00000552215 TMEM266Q2M3C6 531 aa9.28□□□□□ -0.92
CHPT1-208ENST00000552215 SGMS1Q86VZ5 419 aa9.28□□□□□ -0.92
CHPT1-208ENST00000552215 RNF26Q9BY78 433 aaPredicted RBP9.28□□□□□ -0.92
CHPT1-208ENST00000552215 VCPKMTQ9H867 229 aa9.28□□□□□ -0.92
CHPT1-208ENST00000552215 CYTH3O43739 400 aa9.28□□□□□ -0.92
CHPT1-208ENST00000552215 GRM4Q14833 912 aa9.28□□□□□ -0.92
CHPT1-208ENST00000552215 SCYL3Q8IZE3 742 aa9.28□□□□□ -0.92
CHPT1-208ENST00000552215 RNF146Q9NTX7 359 aa9.28□□□□□ -0.92
CHPT1-208ENST00000552215 CEP131Q9UPN4 1083 aa9.28□□□□□ -0.92
CHPT1-208ENST00000552215 LAMB4A4D0S4 1761 aa9.28□□□□□ -0.92
CHPT1-208ENST00000552215 SPEF2Q9C093 1822 aa9.28□□□□□ -0.92
CHPT1-208ENST00000552215 RFX7Q2KHR2 1363 aa9.28□□□□□ -0.92
CHPT1-208ENST00000552215 ZBTB5O15062 677 aa9.27□□□□□ -0.92
CHPT1-208ENST00000552215 PCP11498 1178 aaKnown RBP9.27□□□□□ -0.92
CHPT1-208ENST00000552215 SKOR2Q2VWA4 1001 aaPredicted RBP9.27□□□□□ -0.92
CHPT1-208ENST00000552215 TPH2Q8IWU9 490 aa9.27□□□□□ -0.92
CHPT1-208ENST00000552215 ANKRD13AQ8IZ07 590 aa9.27□□□□□ -0.92
CHPT1-208ENST00000552215 TRERF1Q96PN7 1200 aa9.27□□□□□ -0.92
CHPT1-208ENST00000552215 GMLQ99445 158 aa9.27□□□□□ -0.92
CHPT1-208ENST00000552215 TDP2O95551 362 aa9.27□□□□□ -0.93
CHPT1-208ENST00000552215 VCAM1P19320 739 aa9.27□□□□□ -0.93
CHPT1-208ENST00000552215 PPP4R3BQ5MIZ7 849 aa9.27□□□□□ -0.93
CHPT1-208ENST00000552215 FAM217BQ9NTX9 383 aaPredicted RBP9.27□□□□□ -0.93
CHPT1-208ENST00000552215 PNMA6FA0A0J9YX94 578 aa9.27□□□□□ -0.93
CHPT1-208ENST00000552215 CTNND1O60716 968 aaKnown RBP9.27□□□□□ -0.93
CHPT1-208ENST00000552215 MMP1P03956 469 aa9.27□□□□□ -0.93
CHPT1-208ENST00000552215 STAT6P42226 847 aa9.27□□□□□ -0.93
CHPT1-208ENST00000552215 TAF1CQ15572 869 aaPredicted RBP9.27□□□□□ -0.93
CHPT1-208ENST00000552215 EPSTI1Q96J88 318 aa9.27□□□□□ -0.93
CHPT1-208ENST00000552215 ANAPC4Q9UJX5 808 aa9.27□□□□□ -0.93
CHPT1-208ENST00000552215 PRPF3O43395 683 aaKnown RBP9.27□□□□□ -0.93
CHPT1-208ENST00000552215 NR1I2O75469 434 aa9.27□□□□□ -0.93
CHPT1-208ENST00000552215 MBD3O95983 291 aa9.27□□□□□ -0.93
CHPT1-208ENST00000552215 BAATQ14032 418 aaPredicted RBP9.27□□□□□ -0.93
CHPT1-208ENST00000552215 CALCRLQ16602 461 aa9.27□□□□□ -0.93
CHPT1-208ENST00000552215 Q3C1V9 767 aa9.27□□□□□ -0.93
CHPT1-208ENST00000552215 UTP14CQ5TAP6 766 aaKnown RBP9.27□□□□□ -0.93
CHPT1-208ENST00000552215 PRPF38AQ8NAV1 312 aaKnown RBP9.27□□□□□ -0.93
CHPT1-208ENST00000552215 ZHX1Q9UKY1 873 aaPredicted RBP9.27□□□□□ -0.93
CHPT1-208ENST00000552215 EPB41L2O43491 1005 aaKnown RBP9.26□□□□□ -0.93
CHPT1-208ENST00000552215 PTPRAP18433 802 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 STAT3P40763 770 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 MATR3P43243 847 aaKnown RBP eCLIP9.26□□□□□ -0.932e-7■■■□□ 14.9
CHPT1-208ENST00000552215 USP14P54578 494 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 KCTD2Q14681 263 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 KARSQ15046 597 aaKnown RBP9.26□□□□□ -0.93
CHPT1-208ENST00000552215 EARS2Q5JPH6 523 aaKnown RBP9.26□□□□□ -0.93
CHPT1-208ENST00000552215 CYP4F22Q6NT55 531 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 TYW1BQ6NUM6 668 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 MMRN2Q9H8L6 949 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 PCDHA7Q9UN72 937 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 ABCB11O95342 1321 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 NFIBO00712 420 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 IGBP1P78318 339 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 PDE4CQ08493 712 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 MRPS27Q92552 414 aaKnown RBP9.26□□□□□ -0.93
CHPT1-208ENST00000552215 UBR2Q8IWV8 1755 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 NEMFO60524 1076 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 CYP2B6P20813 491 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 MARK3P27448 753 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 CCT6AP40227 531 aaKnown RBP9.26□□□□□ -0.93
CHPT1-208ENST00000552215 BACE1P56817 501 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 UBE2HP62256 183 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 MAP3K11Q16584 847 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 RILPL1Q5EBL4 403 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 KIAA1755Q5JYT7 1200 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 FAM83AQ86UY5 434 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 PLA2G4DQ86XP0 818 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 KRI1Q8N9T8 703 aaKnown RBP9.26□□□□□ -0.93
CHPT1-208ENST00000552215 RMDN3Q96TC7 470 aa9.26□□□□□ -0.93
CHPT1-208ENST00000552215 P2RX7Q99572 595 aaKnown RBP9.26□□□□□ -0.93
CHPT1-208ENST00000552215 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.26□□□□□ -0.936e-6■■■■■ 48.1
CHPT1-208ENST00000552215 TNRC6CQ9HCJ0 1690 aaKnown RBP9.26□□□□□ -0.93
CHPT1-208ENST00000552215 POTEMA6NI47 508 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 POTEB2H3BUK9 544 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 TRPA1O75762 1119 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 COG2Q14746 738 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 PTPN21Q16825 1174 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 PFKFB3Q16875 520 aaPredicted RBP9.25□□□□□ -0.93
CHPT1-208ENST00000552215 TREML2Q5T2D2 321 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 RNF207Q6ZRF8 634 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 USP49Q70CQ1 688 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 LRWD1Q9UFC0 647 aa9.25□□□□□ -0.93
CHPT1-208ENST00000552215 DDX25Q9UHL0 483 aaKnown RBP9.25□□□□□ -0.93
CHPT1-208ENST00000552215 PCDHA4Q9UN74 947 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms