RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 SOCS4Q8WXH5 440 aa12.4□□□□□ -0.42
PTCH1-225ENST00000551845 UBA5Q9GZZ9 404 aa12.4□□□□□ -0.42
PTCH1-225ENST00000551845 SLC5A4Q9NY91 659 aa12.4□□□□□ -0.42
PTCH1-225ENST00000551845 PNMA2Q9UL42 364 aa12.4□□□□□ -0.42
PTCH1-225ENST00000551845 ZNF214Q9UL59 606 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-225ENST00000551845 SNX14Q9Y5W7 946 aa12.4□□□□□ -0.42
PTCH1-225ENST00000551845 BRCA2P51587 3418 aa12.4□□□□□ -0.42
PTCH1-225ENST00000551845 ATAD5Q96QE3 1844 aa12.39□□□□□ -0.43
PTCH1-225ENST00000551845 ADCY3O60266 1144 aa12.39□□□□□ -0.43
PTCH1-225ENST00000551845 FCER1AP12319 257 aa12.39□□□□□ -0.43
PTCH1-225ENST00000551845 XRCC5P13010 732 aaKnown RBP12.39□□□□□ -0.43
PTCH1-225ENST00000551845 CCL5P13501 91 aa12.39□□□□□ -0.43
PTCH1-225ENST00000551845 RGS2P41220 211 aa12.39□□□□□ -0.43
PTCH1-225ENST00000551845 GJA8P48165 433 aa12.39□□□□□ -0.43
PTCH1-225ENST00000551845 UBXN2AP68543 259 aa12.39□□□□□ -0.43
PTCH1-225ENST00000551845 KCTD2Q14681 263 aa12.39□□□□□ -0.43
PTCH1-225ENST00000551845 MORN1Q5T089 497 aa12.39□□□□□ -0.43
PTCH1-225ENST00000551845 SNRNP48Q6IEG0 339 aaKnown RBP12.39□□□□□ -0.43
PTCH1-225ENST00000551845 BLOC1S2Q6QNY1 142 aa12.39□□□□□ -0.43
PTCH1-225ENST00000551845 ABRAQ8N0Z2 381 aa12.39□□□□□ -0.43
PTCH1-225ENST00000551845 NUP133Q8WUM0 1156 aa12.39□□□□□ -0.43
PTCH1-225ENST00000551845 LRCH3Q96II8 777 aa12.39□□□□□ -0.43
PTCH1-225ENST00000551845 JAKMIP1Q96N16 626 aaKnown RBP12.39□□□□□ -0.43
PTCH1-225ENST00000551845 RNF208Q9H0X6 261 aa12.39□□□□□ -0.43
PTCH1-225ENST00000551845 PRO3102Q9H379 93 aa12.39□□□□□ -0.43
PTCH1-225ENST00000551845 VAT1LQ9HCJ6 419 aa12.39□□□□□ -0.43
PTCH1-225ENST00000551845 SLC12A7Q9Y666 1083 aa12.39□□□□□ -0.43
PTCH1-225ENST00000551845 WDR19Q8NEZ3 1342 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 A0A1W2PPC1 479 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 KLRF2D3W0D1 207 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 SOX1O00570 391 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-225ENST00000551845 SH2B2O14492 632 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-225ENST00000551845 DHX16O60231 1041 aaKnown RBP12.38□□□□□ -0.43
PTCH1-225ENST00000551845 FARP2O94887 1054 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-225ENST00000551845 GJB1P08034 283 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 CALM1P0DP23 149 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 CALM2P0DP24 149 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 CALM3P0DP25 149 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 TROAPQ12815 778 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 MAP2K5Q13163 448 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 TKFCQ3LXA3 575 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 CCDC174Q6PII3 467 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 RASGRP2Q7LDG7 609 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 TRMT44Q8IYL2 757 aaKnown RBP12.38□□□□□ -0.43
PTCH1-225ENST00000551845 SLAIN1Q8ND83 568 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 CHST13Q8NET6 341 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 AGBL1Q96MI9 1066 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 MAP3K14Q99558 947 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 LRRC2Q9BYS8 371 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 LY9Q9HBG7 655 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 SENP2Q9HC62 589 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 FBXO40Q9UH90 709 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 RIPK3Q9Y572 518 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 CEP290O15078 2479 aa12.38□□□□□ -0.43
PTCH1-225ENST00000551845 SZT2Q5T011 3432 aa12.37□□□□□ -0.43
PTCH1-225ENST00000551845 PALM3A6NDB9 673 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-225ENST00000551845 EVI5O60447 810 aa12.37□□□□□ -0.43
PTCH1-225ENST00000551845 ICAM1P05362 532 aa12.37□□□□□ -0.43
PTCH1-225ENST00000551845 KIF5BP33176 963 aa12.37□□□□□ -0.43
PTCH1-225ENST00000551845 GNAQP50148 359 aa12.37□□□□□ -0.43
PTCH1-225ENST00000551845 SNAP25P60880 206 aa12.37□□□□□ -0.43
PTCH1-225ENST00000551845 GRB14Q14449 540 aa12.37□□□□□ -0.43
PTCH1-225ENST00000551845 GRM4Q14833 912 aa12.37□□□□□ -0.43
PTCH1-225ENST00000551845 ZNF654Q8IZM8 581 aa12.37□□□□□ -0.43
PTCH1-225ENST00000551845 STAG2Q8N3U4 1231 aa12.37□□□□□ -0.43
PTCH1-225ENST00000551845 CTCFLQ8NI51 663 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-225ENST00000551845 USP6NLQ92738 828 aa12.37□□□□□ -0.43
PTCH1-225ENST00000551845 DDX11Q96FC9 970 aa12.37□□□□□ -0.43
PTCH1-225ENST00000551845 TRERF1Q96PN7 1200 aa12.37□□□□□ -0.43
PTCH1-225ENST00000551845 MMP19Q99542 508 aa12.37□□□□□ -0.43
PTCH1-225ENST00000551845 RANBP17Q9H2T7 1088 aaKnown RBP12.37□□□□□ -0.43
PTCH1-225ENST00000551845 GPHNQ9NQX3 736 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-225ENST00000551845 MAD2L2Q9UI95 211 aa12.37□□□□□ -0.43
PTCH1-225ENST00000551845 ZNF536O15090 1300 aa12.37□□□□□ -0.43
PTCH1-225ENST00000551845 LOC285556D6RIA3 1793 aa12.36□□□□□ -0.43
PTCH1-225ENST00000551845 DDAH1O94760 285 aa12.36□□□□□ -0.43
PTCH1-225ENST00000551845 HOXC6P09630 235 aa12.36□□□□□ -0.43
PTCH1-225ENST00000551845 ALAS1P13196 640 aa12.36□□□□□ -0.43
PTCH1-225ENST00000551845 CASTP20810 708 aaKnown RBP12.36□□□□□ -0.43
PTCH1-225ENST00000551845 ADORA2AP29274 412 aa12.36□□□□□ -0.43
PTCH1-225ENST00000551845 UBE2Q1Q7Z7E8 422 aa12.36□□□□□ -0.43
PTCH1-225ENST00000551845 SGMS1Q86VZ5 419 aa12.36□□□□□ -0.43
PTCH1-225ENST00000551845 ADGRF4Q8IZF3 695 aa12.36□□□□□ -0.43
PTCH1-225ENST00000551845 ANKRD35Q8N283 1001 aa12.36□□□□□ -0.43
PTCH1-225ENST00000551845 U2AF1L4Q8WU68 220 aaKnown RBP12.36□□□□□ -0.43
PTCH1-225ENST00000551845 TCEANC2Q96MN5 208 aa12.36□□□□□ -0.43
PTCH1-225ENST00000551845 LZTS2Q9BRK4 669 aa12.36□□□□□ -0.43
PTCH1-225ENST00000551845 TM6SF1Q9BZW5 370 aa12.36□□□□□ -0.43
PTCH1-225ENST00000551845 CPVLQ9H3G5 476 aa12.36□□□□□ -0.43
PTCH1-225ENST00000551845 ZSWIM6Q9HCJ5 1215 aa12.36□□□□□ -0.43
PTCH1-225ENST00000551845 CCPG1Q9ULG6 757 aa12.36□□□□□ -0.43
PTCH1-225ENST00000551845 CYP46A1Q9Y6A2 500 aa12.36□□□□□ -0.43
PTCH1-225ENST00000551845 GREB1LQ9C091 1923 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-225ENST00000551845 ABCB7O75027 752 aa12.35□□□□□ -0.43
PTCH1-225ENST00000551845 CPA1P15085 419 aa12.35□□□□□ -0.43
PTCH1-225ENST00000551845 ELNP15502 786 aa12.35□□□□□ -0.43
PTCH1-225ENST00000551845 RPS6KB1P23443 525 aa12.35□□□□□ -0.43
PTCH1-225ENST00000551845 SMARCA1P28370 1054 aa12.35□□□□□ -0.43
PTCH1-225ENST00000551845 ANAPC15P60006 121 aa12.35□□□□□ -0.43
PTCH1-225ENST00000551845 COL9A3Q14050 684 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms