RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 KLF18A0A0U1RQI7 1052 aa8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 SH2B2O14492 632 aaPredicted RBP8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 TRAK2O60296 914 aa8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 JAK2O60674 1132 aa8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 DTNBO60941 627 aa8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 COBLO75128 1261 aa8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 HOXC6P09630 235 aa8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 CYBAP13498 195 aa8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 PDIA4P13667 645 aaKnown RBP8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 CAPN2P17655 700 aa8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 PDCP20941 246 aa8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 CYP2C19P33261 490 aa8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 RGS2P41220 211 aa8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 MCTP1Q6DN14 999 aa8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 MFSD6Q6ZSS7 791 aa8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 SMARCC2Q8TAQ2 1214 aa8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 CHMP4CQ96CF2 233 aa8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 MOV10L1Q9BXT6 1211 aaKnown RBP8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 TRIM34Q9BYJ4 488 aa8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 ATP8A2Q9NTI2 1148 aa8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 BRPF3Q9ULD4 1205 aa8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 MTMR6Q9Y217 621 aa8.61□□□□□ -1.03
SMARCD1-210ENST00000551352 REV3LO60673 3130 aa8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 MYH15Q9Y2K3 1946 aa8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 SLC15A5A6NIM6 579 aa8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 GOLGA8BA8MQT2 603 aa8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 MINDY4BA8MYZ0 360 aa8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 KDM4AO75164 1064 aa8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 CTDNEP1O95476 244 aa8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 F13A1P00488 732 aa8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 CCT2P78371 535 aaKnown RBP8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 HMGN5P82970 282 aaKnown RBP8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 SKOR2Q2VWA4 1001 aaPredicted RBP8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 LARP1BQ659C4 914 aaKnown RBP8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 TTC6Q86TZ1 520 aa8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 NSUN7Q8NE18 718 aaKnown RBP8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 ATG4CQ96DT6 458 aa8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 CHAMP1Q96JM3 812 aa8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 FEZ1Q99689 392 aa8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 MTA3Q9BTC8 594 aa8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 NCOA5Q9HCD5 579 aaKnown RBP8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 INCENPQ9NQS7 918 aa8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 MCM9Q9NXL9 1143 aa8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 ZSWIM5Q9P217 1185 aa8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 NAP1L2Q9ULW6 460 aaPredicted RBP8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 SPTBN5Q9NRC6 3674 aaKnown RBP8.6□□□□□ -1.03
SMARCD1-210ENST00000551352 PTPDC1A2A3K4 754 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 VPS37CA5D8V6 355 aaPredicted RBP8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 USP17L12C9JPN9 530 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 USP17L21D6R901 530 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 POLR3DP05423 398 aaPredicted RBP8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 FGRP09769 529 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 PCP11498 1178 aaKnown RBP8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 LIFRP42702 1097 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 USP14P54578 494 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 MDM2Q00987 491 aaPredicted RBP8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 LRIT3Q3SXY7 679 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 SBK1Q52WX2 424 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 TMEM67Q5HYA8 995 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 RRP12Q5JTH9 1297 aaKnown RBP8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 PRAMEF19Q5SWL8 479 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 ANO1Q5XXA6 986 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 CTR9Q6PD62 1173 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 SGMS1Q86VZ5 419 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 CERS3Q8IU89 383 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 IGDCC4Q8TDY8 1250 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 GTF3C2Q8WUA4 911 aaPredicted RBP8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 LY9Q9HBG7 655 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 TOMM22Q9NS69 142 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 LMBRD1Q9NUN5 540 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 FBXO28Q9NVF7 368 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 ARPP21Q9UBL0 812 aaPredicted RBP8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 KIF3AQ9Y496 699 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 ATP6V1DQ9Y5K8 247 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 CDH23Q9H251 3354 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 NID2Q14112 1375 aa8.59□□□□□ -1.03
SMARCD1-210ENST00000551352 IFIT3O14879 490 aaKnown RBP8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 DHX16O60231 1041 aaKnown RBP8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 ERCC3P19447 782 aa8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 ADORA2AP29274 412 aa8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 DSG3P32926 999 aa8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 CDK8P49336 464 aa8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 GSE1Q14687 1217 aa8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 GJC2Q5T442 439 aaPredicted RBP8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 C12orf60Q5U649 245 aa8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 WDR78Q5VTH9 848 aa8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 APOA5Q6Q788 366 aa8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 TRMT44Q8IYL2 757 aaKnown RBP8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 TDHQ8IZJ6 230 aa8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 SPICE1Q8N0Z3 855 aa8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 REPS2Q8NFH8 660 aa8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 ESR2Q92731 530 aa8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 DDX11Q96FC9 970 aa8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 SPATC1LQ9H0A9 340 aa8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 SENP2Q9HC62 589 aa8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 CABP5Q9NP86 173 aa8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 DDX20Q9UHI6 824 aaKnown RBP8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 ADAMTS5Q9UNA0 930 aa8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms