RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 VPS33BQ9H267 617 aa13.08□□□□□ -0.32
RAB5C-208ENST00000551338 PYCARDQ9ULZ3 195 aa13.08□□□□□ -0.32
RAB5C-208ENST00000551338 PNMA6FA0A0J9YX94 578 aa13.07□□□□□ -0.32
RAB5C-208ENST00000551338 SPDYE2BA6NHP3 402 aa13.07□□□□□ -0.32
RAB5C-208ENST00000551338 SPDYE6P0CI01 402 aa13.07□□□□□ -0.32
RAB5C-208ENST00000551338 CASP1P29466 404 aa13.07□□□□□ -0.32
RAB5C-208ENST00000551338 AFMP43652 599 aa13.07□□□□□ -0.32
RAB5C-208ENST00000551338 ADCY7P51828 1080 aa13.07□□□□□ -0.32
RAB5C-208ENST00000551338 TPM4P67936 248 aa13.07□□□□□ -0.32
RAB5C-208ENST00000551338 JAG1P78504 1218 aa13.07□□□□□ -0.32
RAB5C-208ENST00000551338 MYL5Q02045 173 aa13.07□□□□□ -0.32
RAB5C-208ENST00000551338 ICA1Q05084 483 aa13.07□□□□□ -0.32
RAB5C-208ENST00000551338 JAKMIP3Q5VZ66 844 aa13.07□□□□□ -0.32
RAB5C-208ENST00000551338 KCTD1Q719H9 257 aa13.07□□□□□ -0.32
RAB5C-208ENST00000551338 NEK8Q86SG6 692 aa13.07□□□□□ -0.32
RAB5C-208ENST00000551338 REXO1Q8N1G1 1221 aaKnown RBP13.07□□□□□ -0.32
RAB5C-208ENST00000551338 PYM1Q9BRP8 204 aaKnown RBP13.07□□□□□ -0.32
RAB5C-208ENST00000551338 KANSL2Q9H9L4 492 aa13.07□□□□□ -0.32
RAB5C-208ENST00000551338 ZNF70Q9UC06 446 aaPredicted RBP13.07□□□□□ -0.32
RAB5C-208ENST00000551338 DICER1Q9UPY3 1922 aaKnown RBP13.07□□□□□ -0.32
RAB5C-208ENST00000551338 CLRN2A0PK11 232 aa13.06□□□□□ -0.32
RAB5C-208ENST00000551338 USP17L10C9JJH3 530 aa13.06□□□□□ -0.32
RAB5C-208ENST00000551338 LAD1O00515 517 aa13.06□□□□□ -0.32
RAB5C-208ENST00000551338 EDIL3O43854 480 aa13.06□□□□□ -0.32
RAB5C-208ENST00000551338 OFD1O75665 1012 aa13.06□□□□□ -0.32
RAB5C-208ENST00000551338 SMC2O95347 1197 aa13.06□□□□□ -0.32
RAB5C-208ENST00000551338 OR52Z1P0C646 297 aa13.06□□□□□ -0.32
RAB5C-208ENST00000551338 LMOD1P29536 600 aaPredicted RBP13.06□□□□□ -0.32
RAB5C-208ENST00000551338 SLC16A2P36021 539 aa13.06□□□□□ -0.32
RAB5C-208ENST00000551338 ORC2Q13416 577 aaPredicted RBP13.06□□□□□ -0.32
RAB5C-208ENST00000551338 ABCB5Q2M3G0 1257 aa13.06□□□□□ -0.32
RAB5C-208ENST00000551338 SPDYE2Q495Y8 402 aa13.06□□□□□ -0.32
RAB5C-208ENST00000551338 SLFN13Q68D06 897 aa13.06□□□□□ -0.32
RAB5C-208ENST00000551338 NIM1KQ8IY84 436 aa13.06□□□□□ -0.32
RAB5C-208ENST00000551338 MLKLQ8NB16 471 aa13.06□□□□□ -0.32
RAB5C-208ENST00000551338 TBCKQ8TEA7 893 aa13.06□□□□□ -0.32
RAB5C-208ENST00000551338 CCDC34Q96HJ3 373 aa13.06□□□□□ -0.32
RAB5C-208ENST00000551338 XPO4Q9C0E2 1151 aaKnown RBP13.06□□□□□ -0.32
RAB5C-208ENST00000551338 CCSER1Q9C0I3 900 aa13.06□□□□□ -0.32
RAB5C-208ENST00000551338 TMOD2Q9NZR1 351 aa13.06□□□□□ -0.32
RAB5C-208ENST00000551338 IFNKQ9P0W0 207 aa13.06□□□□□ -0.32
RAB5C-208ENST00000551338 BIN2Q9UBW5 565 aaPredicted RBP13.06□□□□□ -0.32
RAB5C-208ENST00000551338 HDAC9Q9UKV0 1011 aa13.06□□□□□ -0.32
RAB5C-208ENST00000551338 ZBTB12Q9Y330 459 aaPredicted RBP13.06□□□□□ -0.32
RAB5C-208ENST00000551338 RBBP6Q7Z6E9 1792 aaKnown RBP13.06□□□□□ -0.32
RAB5C-208ENST00000551338 PARP14Q460N5 1801 aa13.05□□□□□ -0.32
RAB5C-208ENST00000551338 PP2D1A8MPX8 630 aa13.05□□□□□ -0.32
RAB5C-208ENST00000551338 TCP10L2B9ZVM9 353 aa13.05□□□□□ -0.32
RAB5C-208ENST00000551338 ZBTB5O15062 677 aa13.05□□□□□ -0.32
RAB5C-208ENST00000551338 GTPBP6O43824 516 aaPredicted RBP13.05□□□□□ -0.32
RAB5C-208ENST00000551338 ZBTB7AO95365 584 aa13.05□□□□□ -0.32
RAB5C-208ENST00000551338 CLK2P49760 499 aaKnown RBP13.05□□□□□ -0.32
RAB5C-208ENST00000551338 TGFB2P61812 414 aa13.05□□□□□ -0.32
RAB5C-208ENST00000551338 FANCCQ00597 558 aa13.05□□□□□ -0.32
RAB5C-208ENST00000551338 FMR1Q06787 632 aaKnown RBP eCLIP13.05□□□□□ -0.32
RAB5C-208ENST00000551338 KARSQ15046 597 aaKnown RBP13.05□□□□□ -0.32
RAB5C-208ENST00000551338 DLGAP5Q15398 846 aa13.05□□□□□ -0.32
RAB5C-208ENST00000551338 LETM2Q2VYF4 491 aa13.05□□□□□ -0.32
RAB5C-208ENST00000551338 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.05□□□□□ -0.32
RAB5C-208ENST00000551338 DTHD1Q6ZMT9 781 aa13.05□□□□□ -0.32
RAB5C-208ENST00000551338 C17orf53Q8N3J3 647 aaPredicted RBP13.05□□□□□ -0.32
RAB5C-208ENST00000551338 IQUBQ8NA54 791 aa13.05□□□□□ -0.32
RAB5C-208ENST00000551338 AGBL3Q8NEM8 1001 aa13.05□□□□□ -0.32
RAB5C-208ENST00000551338 KIAA1524Q8TCG1 905 aa13.05□□□□□ -0.32
RAB5C-208ENST00000551338 CACTINQ8WUQ7 758 aaKnown RBP13.05□□□□□ -0.32
RAB5C-208ENST00000551338 ZBED3Q96IU2 234 aaPredicted RBP13.05□□□□□ -0.32
RAB5C-208ENST00000551338 MED15Q96RN5 788 aa13.05□□□□□ -0.32
RAB5C-208ENST00000551338 CSRNP1Q96S65 589 aa13.05□□□□□ -0.32
RAB5C-208ENST00000551338 MTRQ99707 1265 aa13.05□□□□□ -0.32
RAB5C-208ENST00000551338 RIC8AQ9NPQ8 531 aa13.05□□□□□ -0.32
RAB5C-208ENST00000551338 DACH1Q9UI36 760 aa13.05□□□□□ -0.32
RAB5C-208ENST00000551338 ZNRF3Q9ULT6 936 aa13.05□□□□□ -0.32
RAB5C-208ENST00000551338 DOCK1Q14185 1865 aa13.05□□□□□ -0.32
RAB5C-208ENST00000551338 MYO1BO43795 1136 aa13.04□□□□□ -0.32
RAB5C-208ENST00000551338 NEMFO60524 1076 aa13.04□□□□□ -0.32
RAB5C-208ENST00000551338 CCNT1O60563 726 aaKnown RBP13.04□□□□□ -0.32
RAB5C-208ENST00000551338 GH2P01242 217 aa13.04□□□□□ -0.32
RAB5C-208ENST00000551338 ATP1A3P13637 1013 aa13.04□□□□□ -0.32
RAB5C-208ENST00000551338 TXLNAP40222 546 aa13.04□□□□□ -0.32
RAB5C-208ENST00000551338 LRMPQ12912 555 aa13.04□□□□□ -0.32
RAB5C-208ENST00000551338 QRICH1Q2TAL8 776 aa13.04□□□□□ -0.32
RAB5C-208ENST00000551338 NAALADL2Q58DX5 795 aa13.04□□□□□ -0.32
RAB5C-208ENST00000551338 RBM26Q5T8P6 1007 aaKnown RBP13.04□□□□□ -0.32
RAB5C-208ENST00000551338 MTMR14Q8NCE2 650 aa13.04□□□□□ -0.32
RAB5C-208ENST00000551338 GMCL1P1Q8NEA9 526 aa13.04□□□□□ -0.32
RAB5C-208ENST00000551338 LRRC15Q8TF66 581 aa13.04□□□□□ -0.32
RAB5C-208ENST00000551338 FAM151AQ8WW52 585 aa13.04□□□□□ -0.32
RAB5C-208ENST00000551338 STAMQ92783 540 aa13.04□□□□□ -0.32
RAB5C-208ENST00000551338 DPF2Q92785 391 aa13.04□□□□□ -0.32
RAB5C-208ENST00000551338 DISC1Q9NRI5 854 aa13.04□□□□□ -0.32
RAB5C-208ENST00000551338 PIM2Q9P1W9 311 aa13.04□□□□□ -0.32
RAB5C-208ENST00000551338 HERC5Q9UII4 1024 aaKnown RBP13.04□□□□□ -0.32
RAB5C-208ENST00000551338 NDUFB10O96000 172 aa13.03□□□□□ -0.32
RAB5C-208ENST00000551338 CD44P16070 742 aaKnown RBP13.03□□□□□ -0.32
RAB5C-208ENST00000551338 CDC25AP30304 524 aa13.03□□□□□ -0.32
RAB5C-208ENST00000551338 SLC1A4P43007 532 aa13.03□□□□□ -0.32
RAB5C-208ENST00000551338 CXCL9Q07325 125 aa13.03□□□□□ -0.32
RAB5C-208ENST00000551338 CUL4BQ13620 913 aa13.03□□□□□ -0.32
RAB5C-208ENST00000551338 ARID5BQ14865 1188 aa13.03□□□□□ -0.32
RAB5C-208ENST00000551338 CDC37Q16543 378 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms