RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.05■□□□□ 0.48
PRPF40B-211ENST00000551063 HMX1Q9NP08 348 aaPredicted RBP18.05■□□□□ 0.48
PRPF40B-211ENST00000551063 GPCPD1Q9NPB8 672 aa18.05■□□□□ 0.48
PRPF40B-211ENST00000551063 PNMA2Q9UL42 364 aa18.05■□□□□ 0.48
PRPF40B-211ENST00000551063 COBLO75128 1261 aa18.04■□□□□ 0.48
PRPF40B-211ENST00000551063 IGHA2P01877 340 aa18.04■□□□□ 0.48
PRPF40B-211ENST00000551063 SLC16A2P36021 539 aa18.04■□□□□ 0.48
PRPF40B-211ENST00000551063 ANTXR2P58335 489 aa18.04■□□□□ 0.48
PRPF40B-211ENST00000551063 U2AF1L4Q8WU68 220 aaKnown RBP18.04■□□□□ 0.48
PRPF40B-211ENST00000551063 SHISA4Q96DD7 197 aa18.04■□□□□ 0.48
PRPF40B-211ENST00000551063 ACAD9Q9H845 621 aa18.04■□□□□ 0.48
PRPF40B-211ENST00000551063 FLRT1Q9NZU1 646 aa18.04■□□□□ 0.48
PRPF40B-211ENST00000551063 DIS3Q9Y2L1 958 aaKnown RBP18.04■□□□□ 0.48
PRPF40B-211ENST00000551063 WDR19Q8NEZ3 1342 aa18.03■□□□□ 0.48
PRPF40B-211ENST00000551063 ICAM1P05362 532 aa18.03■□□□□ 0.48
PRPF40B-211ENST00000551063 PARP1P09874 1014 aaKnown RBP18.03■□□□□ 0.48
PRPF40B-211ENST00000551063 WTAPQ15007 396 aa18.03■□□□□ 0.48
PRPF40B-211ENST00000551063 CCDC174Q6PII3 467 aa18.03■□□□□ 0.48
PRPF40B-211ENST00000551063 MAML3Q96JK9 1138 aa18.03■□□□□ 0.48
PRPF40B-211ENST00000551063 HTATIP2Q9BUP3 242 aa18.03■□□□□ 0.48
PRPF40B-211ENST00000551063 RNF146Q9NTX7 359 aa18.03■□□□□ 0.48
PRPF40B-211ENST00000551063 COL11A1P12107 1806 aaPredicted RBP18.02■□□□□ 0.48
PRPF40B-211ENST00000551063 REC8O95072 547 aa18.02■□□□□ 0.48
PRPF40B-211ENST00000551063 SGPL1O95470 568 aa18.02■□□□□ 0.48
PRPF40B-211ENST00000551063 GOLGA8HP0CJ92 632 aa18.02■□□□□ 0.48
PRPF40B-211ENST00000551063 MCM5P33992 734 aa18.02■□□□□ 0.48
PRPF40B-211ENST00000551063 CACNB2Q08289 660 aaPredicted RBP18.02■□□□□ 0.48
PRPF40B-211ENST00000551063 ZNF792Q3KQV3 632 aa18.02■□□□□ 0.48
PRPF40B-211ENST00000551063 TMEM67Q5HYA8 995 aa18.02■□□□□ 0.48
PRPF40B-211ENST00000551063 DPF3Q92784 378 aa18.02■□□□□ 0.48
PRPF40B-211ENST00000551063 AGBL1Q96MI9 1066 aa18.02■□□□□ 0.48
PRPF40B-211ENST00000551063 DEFB118Q96PH6 123 aa18.02■□□□□ 0.48
PRPF40B-211ENST00000551063 CCPG1Q9ULG6 757 aa18.02■□□□□ 0.48
PRPF40B-211ENST00000551063 DNAJC25-GNG10A0A024R161 153 aa18.01■□□□□ 0.47
PRPF40B-211ENST00000551063 EPB41L2O43491 1005 aaKnown RBP18.01■□□□□ 0.47
PRPF40B-211ENST00000551063 PRC1O43663 620 aa18.01■□□□□ 0.47
PRPF40B-211ENST00000551063 PGK2P07205 417 aa18.01■□□□□ 0.47
PRPF40B-211ENST00000551063 SLC4A3P48751 1232 aa18.01■□□□□ 0.47
PRPF40B-211ENST00000551063 TSGA10IPQ3SY00 556 aa18.01■□□□□ 0.47
PRPF40B-211ENST00000551063 IGDCC4Q8TDY8 1250 aa18.01■□□□□ 0.47
PRPF40B-211ENST00000551063 DDX11Q96FC9 970 aa18.01■□□□□ 0.47
PRPF40B-211ENST00000551063 TMEM87BQ96K49 555 aa18.01■□□□□ 0.47
PRPF40B-211ENST00000551063 CRISPLD2Q9H0B8 497 aa18.01■□□□□ 0.47
PRPF40B-211ENST00000551063 HOMER2Q9NSB8 354 aa18.01■□□□□ 0.47
PRPF40B-211ENST00000551063 MKI67P46013 3256 aaKnown RBP18■□□□□ 0.47
PRPF40B-211ENST00000551063 H0YGN5 161 aa18■□□□□ 0.47
PRPF40B-211ENST00000551063 ALAS1P13196 640 aa18■□□□□ 0.47
PRPF40B-211ENST00000551063 CYP2C19P33261 490 aa18■□□□□ 0.47
PRPF40B-211ENST00000551063 SNAP25P60880 206 aa18■□□□□ 0.47
PRPF40B-211ENST00000551063 KRT32Q14532 448 aa18■□□□□ 0.47
PRPF40B-211ENST00000551063 CHST3Q7LGC8 479 aa18■□□□□ 0.47
PRPF40B-211ENST00000551063 ZNF467Q7Z7K2 595 aaPredicted RBP18■□□□□ 0.47
PRPF40B-211ENST00000551063 ANKRD35Q8N283 1001 aa18■□□□□ 0.47
PRPF40B-211ENST00000551063 MSL3Q8N5Y2 521 aaKnown RBP18■□□□□ 0.47
PRPF40B-211ENST00000551063 TRERF1Q96PN7 1200 aa18■□□□□ 0.47
PRPF40B-211ENST00000551063 A1CFQ9NQ94 594 aaKnown RBP18■□□□□ 0.47
PRPF40B-211ENST00000551063 NRBP1Q9UHY1 535 aa18■□□□□ 0.47
PRPF40B-211ENST00000551063 PFASO15067 1338 aa17.99■□□□□ 0.47
PRPF40B-211ENST00000551063 SH2B2O14492 632 aaPredicted RBP17.99■□□□□ 0.47
PRPF40B-211ENST00000551063 DDAH1O94760 285 aa17.99■□□□□ 0.47
PRPF40B-211ENST00000551063 TFRCP02786 760 aaKnown RBP17.99■□□□□ 0.47
PRPF40B-211ENST00000551063 CYBAP13498 195 aa17.99■□□□□ 0.47
PRPF40B-211ENST00000551063 TROAPQ12815 778 aa17.99■□□□□ 0.47
PRPF40B-211ENST00000551063 GRM4Q14833 912 aa17.99■□□□□ 0.47
PRPF40B-211ENST00000551063 UBE2Q1Q7Z7E8 422 aa17.99■□□□□ 0.47
PRPF40B-211ENST00000551063 CATIPQ7Z7H3 387 aa17.99■□□□□ 0.47
PRPF40B-211ENST00000551063 NEK1Q96PY6 1258 aa17.99■□□□□ 0.47
PRPF40B-211ENST00000551063 UBA5Q9GZZ9 404 aa17.99■□□□□ 0.47
PRPF40B-211ENST00000551063 LY9Q9HBG7 655 aa17.99■□□□□ 0.47
PRPF40B-211ENST00000551063 SENP2Q9HC62 589 aa17.99■□□□□ 0.47
PRPF40B-211ENST00000551063 COLQQ9Y215 455 aaPredicted RBP17.99■□□□□ 0.47
PRPF40B-211ENST00000551063 PALM3A6NDB9 673 aaPredicted RBP17.98■□□□□ 0.47
PRPF40B-211ENST00000551063 MSCO60682 206 aa17.98■□□□□ 0.47
PRPF40B-211ENST00000551063 FARP2O94887 1054 aaPredicted RBP17.98■□□□□ 0.47
PRPF40B-211ENST00000551063 CCND3P30281 292 aaPredicted RBP17.98■□□□□ 0.47
PRPF40B-211ENST00000551063 HSPA4P34932 840 aa17.98■□□□□ 0.47
PRPF40B-211ENST00000551063 LIFRP42702 1097 aa17.98■□□□□ 0.47
PRPF40B-211ENST00000551063 CDC37Q16543 378 aaPredicted RBP17.98■□□□□ 0.47
PRPF40B-211ENST00000551063 TMTC2Q8N394 836 aa17.98■□□□□ 0.47
PRPF40B-211ENST00000551063 KCNB2Q92953 911 aa17.98■□□□□ 0.47
PRPF40B-211ENST00000551063 TINF2Q9BSI4 451 aa17.98■□□□□ 0.47
PRPF40B-211ENST00000551063 MAD2L2Q9UI95 211 aa17.98■□□□□ 0.47
PRPF40B-211ENST00000551063 KLRF2D3W0D1 207 aa17.97■□□□□ 0.47
PRPF40B-211ENST00000551063 MAMDC4Q6UXC1 1216 aa17.97■□□□□ 0.47
PRPF40B-211ENST00000551063 RASEFQ8IZ41 740 aa17.97■□□□□ 0.47
PRPF40B-211ENST00000551063 ADGRF4Q8IZF3 695 aa17.97■□□□□ 0.47
PRPF40B-211ENST00000551063 STAG2Q8N3U4 1231 aa17.97■□□□□ 0.47
PRPF40B-211ENST00000551063 FAM133AQ8N9E0 248 aa17.97■□□□□ 0.47
PRPF40B-211ENST00000551063 ANKLE1Q8NAG6 615 aa17.97■□□□□ 0.47
PRPF40B-211ENST00000551063 MAP3K14Q99558 947 aa17.97■□□□□ 0.47
PRPF40B-211ENST00000551063 CPVLQ9H3G5 476 aa17.97■□□□□ 0.47
PRPF40B-211ENST00000551063 OGDHLQ9ULD0 1010 aa17.97■□□□□ 0.47
PRPF40B-211ENST00000551063 NR2E3Q9Y5X4 410 aa17.97■□□□□ 0.47
PRPF40B-211ENST00000551063 SYNGAP1Q96PV0 1343 aa17.97■□□□□ 0.47
PRPF40B-211ENST00000551063 POTEB2H3BUK9 544 aa17.96■□□□□ 0.47
PRPF40B-211ENST00000551063 DHX16O60231 1041 aaKnown RBP17.96■□□□□ 0.47
PRPF40B-211ENST00000551063 HMGB1P09429 215 aaKnown RBP17.96■□□□□ 0.47
PRPF40B-211ENST00000551063 MUM1L1Q5H9M0 696 aa17.96■□□□□ 0.47
PRPF40B-211ENST00000551063 ZNF654Q8IZM8 581 aa17.96■□□□□ 0.47
PRPF40B-211ENST00000551063 TRPV1Q8NER1 839 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms