RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 REXO1Q8N1G1 1221 aaKnown RBP23.79■■□□□ 1.4
PRDM4-205ENST00000550376 CCDC17Q96LX7 622 aa23.79■■□□□ 1.4
PRDM4-205ENST00000550376 SLC1A4P43007 532 aa23.79■■□□□ 1.4
PRDM4-205ENST00000550376 ICA1Q05084 483 aa23.79■■□□□ 1.4
PRDM4-205ENST00000550376 ABCB5Q2M3G0 1257 aa23.79■■□□□ 1.4
PRDM4-205ENST00000550376 TATDN1Q6P1N9 297 aa23.79■■□□□ 1.4
PRDM4-205ENST00000550376 DTHD1Q6ZMT9 781 aa23.79■■□□□ 1.4
PRDM4-205ENST00000550376 SPICE1Q8N0Z3 855 aa23.79■■□□□ 1.4
PRDM4-205ENST00000550376 CCDC12Q8WUD4 166 aaPredicted RBP23.79■■□□□ 1.4
PRDM4-205ENST00000550376 DPF2Q92785 391 aa23.79■■□□□ 1.4
PRDM4-205ENST00000550376 NAP1L5Q96NT1 182 aaPredicted RBP23.79■■□□□ 1.4
PRDM4-205ENST00000550376 MED15Q96RN5 788 aa23.79■■□□□ 1.4
PRDM4-205ENST00000550376 MORC3Q14149 939 aa23.78■■□□□ 1.4
PRDM4-205ENST00000550376 SLFN13Q68D06 897 aa23.78■■□□□ 1.4
PRDM4-205ENST00000550376 KLHL10Q6JEL2 608 aa23.78■■□□□ 1.4
PRDM4-205ENST00000550376 MRFAP1L1Q96HT8 127 aa23.78■■□□□ 1.4
PRDM4-205ENST00000550376 VIL1P09327 827 aaKnown RBP23.78■■□□□ 1.4
PRDM4-205ENST00000550376 SMARCA1P28370 1054 aa23.78■■□□□ 1.4
PRDM4-205ENST00000550376 DLGAP5Q15398 846 aa23.78■■□□□ 1.4
PRDM4-205ENST00000550376 E2F4Q16254 413 aa23.78■■□□□ 1.4
PRDM4-205ENST00000550376 MIGA2Q7L4E1 593 aa23.78■■□□□ 1.4
PRDM4-205ENST00000550376 PSMD1Q99460 953 aa23.78■■□□□ 1.4
PRDM4-205ENST00000550376 KANSL2Q9H9L4 492 aa23.78■■□□□ 1.4
PRDM4-205ENST00000550376 MYO3BQ8WXR4 1341 aa23.78■■□□□ 1.4
PRDM4-205ENST00000550376 SIPA1L1O43166 1804 aa23.78■■□□□ 1.4
PRDM4-205ENST00000550376 SMTNL1A8MU46 457 aa23.77■■□□□ 1.4
PRDM4-205ENST00000550376 MYL5Q02045 173 aa23.77■■□□□ 1.4
PRDM4-205ENST00000550376 NT5DC1Q5TFE4 455 aa23.77■■□□□ 1.4
PRDM4-205ENST00000550376 OGFOD1Q8N543 542 aa23.77■■□□□ 1.4
PRDM4-205ENST00000550376 GMLQ99445 158 aa23.77■■□□□ 1.4
PRDM4-205ENST00000550376 PNMA6FA0A0J9YX94 578 aa23.77■■□□□ 1.4
PRDM4-205ENST00000550376 CUL4BQ13620 913 aa23.77■■□□□ 1.4
PRDM4-205ENST00000550376 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.77■■□□□ 1.4
PRDM4-205ENST00000550376 SH3RF1Q7Z6J0 888 aa23.77■■□□□ 1.4
PRDM4-205ENST00000550376 RASSF8Q8NHQ8 419 aa23.77■■□□□ 1.4
PRDM4-205ENST00000550376 ZNF70Q9UC06 446 aaPredicted RBP23.77■■□□□ 1.4
PRDM4-205ENST00000550376 ZNF646O15015 1829 aaPredicted RBP23.77■■□□□ 1.39
PRDM4-205ENST00000550376 CD44P16070 742 aaKnown RBP23.76■■□□□ 1.39
PRDM4-205ENST00000550376 STX17P56962 302 aa23.76■■□□□ 1.39
PRDM4-205ENST00000550376 FANCCQ00597 558 aa23.76■■□□□ 1.39
PRDM4-205ENST00000550376 NOLC1Q14978 699 aaKnown RBP eCLIP23.76■■□□□ 1.39
PRDM4-205ENST00000550376 KANK3Q6NY19 840 aa23.76■■□□□ 1.39
PRDM4-205ENST00000550376 KRT25Q7Z3Z0 450 aa23.76■■□□□ 1.39
PRDM4-205ENST00000550376 GJA10Q969M2 543 aa23.76■■□□□ 1.39
PRDM4-205ENST00000550376 TMEM39BQ9GZU3 492 aa23.76■■□□□ 1.39
PRDM4-205ENST00000550376 MORC2Q9Y6X9 1032 aaPredicted RBP23.76■■□□□ 1.39
PRDM4-205ENST00000550376 A0A1W2PRG0 241 aa23.76■■□□□ 1.39
PRDM4-205ENST00000550376 F5H6K3 240 aa23.76■■□□□ 1.39
PRDM4-205ENST00000550376 EDIL3O43854 480 aa23.76■■□□□ 1.39
PRDM4-205ENST00000550376 ADCY7P51828 1080 aa23.76■■□□□ 1.39
PRDM4-205ENST00000550376 KLRC3Q07444 240 aa23.76■■□□□ 1.39
PRDM4-205ENST00000550376 ARL6IP4Q66PJ3 421 aaKnown RBP23.76■■□□□ 1.39
PRDM4-205ENST00000550376 NEK8Q86SG6 692 aa23.76■■□□□ 1.39
PRDM4-205ENST00000550376 POTEDQ86YR6 584 aa23.76■■□□□ 1.39
PRDM4-205ENST00000550376 IQUBQ8NA54 791 aa23.76■■□□□ 1.39
PRDM4-205ENST00000550376 LRRC15Q8TF66 581 aa23.76■■□□□ 1.39
PRDM4-205ENST00000550376 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.76■■□□□ 1.39
PRDM4-205ENST00000550376 TECP42680 631 aa23.75■■□□□ 1.39
PRDM4-205ENST00000550376 TNNI2P48788 182 aa23.75■■□□□ 1.39
PRDM4-205ENST00000550376 CXCL9Q07325 125 aa23.75■■□□□ 1.39
PRDM4-205ENST00000550376 DPYDQ12882 1025 aa23.75■■□□□ 1.39
PRDM4-205ENST00000550376 PDXDC2PQ6P474 469 aa23.75■■□□□ 1.39
PRDM4-205ENST00000550376 ELOA2Q8IYF1 753 aaPredicted RBP23.75■■□□□ 1.39
PRDM4-205ENST00000550376 SPATA20Q8TB22 786 aa23.75■■□□□ 1.39
PRDM4-205ENST00000550376 FBXO41Q8TF61 875 aa23.75■■□□□ 1.39
PRDM4-205ENST00000550376 PIM2Q9P1W9 311 aa23.75■■□□□ 1.39
PRDM4-205ENST00000550376 IKBKBO14920 756 aa23.75■■□□□ 1.39
PRDM4-205ENST00000550376 TDP2O95551 362 aa23.75■■□□□ 1.39
PRDM4-205ENST00000550376 ECE1P42892 770 aa23.75■■□□□ 1.39
PRDM4-205ENST00000550376 OFD1O75665 1012 aa23.74■■□□□ 1.39
PRDM4-205ENST00000550376 LONP1P36776 959 aaKnown RBP23.74■■□□□ 1.39
PRDM4-205ENST00000550376 NBPF9Q3BBW0 867 aa23.74■■□□□ 1.39
PRDM4-205ENST00000550376 RBM26Q5T8P6 1007 aaKnown RBP23.74■■□□□ 1.39
PRDM4-205ENST00000550376 NIM1KQ8IY84 436 aa23.74■■□□□ 1.39
PRDM4-205ENST00000550376 KIAA1524Q8TCG1 905 aa23.74■■□□□ 1.39
PRDM4-205ENST00000550376 ZNRF3Q9ULT6 936 aa23.74■■□□□ 1.39
PRDM4-205ENST00000550376 USP17L15C9J2P7 530 aa23.74■■□□□ 1.39
PRDM4-205ENST00000550376 USP17L13C9JLJ4 530 aa23.74■■□□□ 1.39
PRDM4-205ENST00000550376 USP17L11C9JVI0 530 aa23.74■■□□□ 1.39
PRDM4-205ENST00000550376 USP17L18D6R9N7 530 aa23.74■■□□□ 1.39
PRDM4-205ENST00000550376 USP17L22D6RA61 530 aa23.74■■□□□ 1.39
PRDM4-205ENST00000550376 USP17L17D6RBQ6 530 aa23.74■■□□□ 1.39
PRDM4-205ENST00000550376 USP17L19D6RCP7 530 aa23.74■■□□□ 1.39
PRDM4-205ENST00000550376 USP17L20D6RJB6 530 aa23.74■■□□□ 1.39
PRDM4-205ENST00000550376 ENTPD3O75355 529 aa23.74■■□□□ 1.39
PRDM4-205ENST00000550376 USP17L24Q0WX57 530 aa23.74■■□□□ 1.39
PRDM4-205ENST00000550376 IKQ13123 557 aaPredicted RBP23.74■■□□□ 1.39
PRDM4-205ENST00000550376 GPATCH4Q5T3I0 446 aaKnown RBP23.74■■□□□ 1.39
PRDM4-205ENST00000550376 USP17L6PQ6QN14 398 aa23.74■■□□□ 1.39
PRDM4-205ENST00000550376 SLC16A10Q8TF71 515 aa23.74■■□□□ 1.39
PRDM4-205ENST00000550376 MYH4Q9Y623 1939 aa23.73■■□□□ 1.39
PRDM4-205ENST00000550376 ZBTB5O15062 677 aa23.73■■□□□ 1.39
PRDM4-205ENST00000550376 SLC37A4O43826 429 aa23.73■■□□□ 1.39
PRDM4-205ENST00000550376 NEMFO60524 1076 aa23.73■■□□□ 1.39
PRDM4-205ENST00000550376 SERPINC1P01008 464 aa23.73■■□□□ 1.39
PRDM4-205ENST00000550376 CDC25BP30305 580 aa23.73■■□□□ 1.39
PRDM4-205ENST00000550376 TXKP42681 527 aa23.73■■□□□ 1.39
PRDM4-205ENST00000550376 QRICH1Q2TAL8 776 aa23.73■■□□□ 1.39
PRDM4-205ENST00000550376 TMEM179Q6ZVK1 233 aa23.73■■□□□ 1.39
PRDM4-205ENST00000550376 SAMSN1Q9NSI8 373 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms