RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 TRIM75PA6NK02 468 aa13.91□□□□□ -0.18
CACNB3-213ENST00000550064 M0R2N6 131 aa13.91□□□□□ -0.18
CACNB3-213ENST00000550064 NASPP49321 788 aaPredicted RBP13.91□□□□□ -0.18
CACNB3-213ENST00000550064 MAP3K11Q16584 847 aa13.91□□□□□ -0.18
CACNB3-213ENST00000550064 PPP1R18Q6NYC8 613 aa13.91□□□□□ -0.18
CACNB3-213ENST00000550064 GPT2Q8TD30 523 aa13.91□□□□□ -0.18
CACNB3-213ENST00000550064 FBXO28Q9NVF7 368 aa13.91□□□□□ -0.18
CACNB3-213ENST00000550064 PCDHA6Q9UN73 950 aa13.91□□□□□ -0.18
CACNB3-213ENST00000550064 AFG3L2Q9Y4W6 797 aa13.91□□□□□ -0.18
CACNB3-213ENST00000550064 PCDHA8Q9Y5H6 950 aa13.91□□□□□ -0.18
CACNB3-213ENST00000550064 C19orf81C9J6K1 198 aa13.9□□□□□ -0.18
CACNB3-213ENST00000550064 TRAF5O00463 557 aa13.9□□□□□ -0.18
CACNB3-213ENST00000550064 YEATS4O95619 227 aa13.9□□□□□ -0.18
CACNB3-213ENST00000550064 GNA11P29992 359 aa13.9□□□□□ -0.18
CACNB3-213ENST00000550064 UBE2HP62256 183 aa13.9□□□□□ -0.18
CACNB3-213ENST00000550064 STK38Q15208 465 aa13.9□□□□□ -0.18
CACNB3-213ENST00000550064 SF3A1Q15459 793 aaKnown RBP13.9□□□□□ -0.18
CACNB3-213ENST00000550064 TPRNQ4KMQ1 711 aa13.9□□□□□ -0.18
CACNB3-213ENST00000550064 RILPL1Q5EBL4 403 aa13.9□□□□□ -0.18
CACNB3-213ENST00000550064 PIK3AP1Q6ZUJ8 805 aa13.9□□□□□ -0.18
CACNB3-213ENST00000550064 FBXO11Q86XK2 927 aa13.9□□□□□ -0.18
CACNB3-213ENST00000550064 ANKRD13AQ8IZ07 590 aa13.9□□□□□ -0.18
CACNB3-213ENST00000550064 LINC00301Q8NCQ3 95 aa13.9□□□□□ -0.18
CACNB3-213ENST00000550064 RASGRP4Q8TDF6 673 aa13.9□□□□□ -0.18
CACNB3-213ENST00000550064 KIFC2Q96AC6 838 aa13.9□□□□□ -0.18
CACNB3-213ENST00000550064 CLMNQ96JQ2 1002 aa13.9□□□□□ -0.18
CACNB3-213ENST00000550064 C12orf42Q96LP6 360 aa13.9□□□□□ -0.18
CACNB3-213ENST00000550064 AMNQ9BXJ7 453 aa13.9□□□□□ -0.18
CACNB3-213ENST00000550064 ELP3Q9H9T3 547 aa13.9□□□□□ -0.18
CACNB3-213ENST00000550064 NMRK2Q9NPI5 230 aa13.9□□□□□ -0.18
CACNB3-213ENST00000550064 PCDHA1Q9Y5I3 950 aa13.9□□□□□ -0.18
CACNB3-213ENST00000550064 MBD3O95983 291 aa13.89□□□□□ -0.19
CACNB3-213ENST00000550064 VCAM1P19320 739 aa13.89□□□□□ -0.19
CACNB3-213ENST00000550064 ATP2B1P20020 1258 aa13.89□□□□□ -0.19
CACNB3-213ENST00000550064 ADCY7P51828 1080 aa13.89□□□□□ -0.19
CACNB3-213ENST00000550064 HMGCS2P54868 508 aa13.89□□□□□ -0.19
CACNB3-213ENST00000550064 FMR1Q06787 632 aaKnown RBP eCLIP13.89□□□□□ -0.19
CACNB3-213ENST00000550064 SLC39A14Q15043 492 aa13.89□□□□□ -0.19
CACNB3-213ENST00000550064 KLHL40Q2TBA0 621 aa13.89□□□□□ -0.19
CACNB3-213ENST00000550064 SAMD1Q6SPF0 538 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-213ENST00000550064 ARMC9Q7Z3E5 817 aa13.89□□□□□ -0.19
CACNB3-213ENST00000550064 LDHDQ86WU2 507 aa13.89□□□□□ -0.19
CACNB3-213ENST00000550064 ZNF526Q8TF50 670 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-213ENST00000550064 CNKSR2Q8WXI2 1034 aa13.89□□□□□ -0.19
CACNB3-213ENST00000550064 PGBD1Q96JS3 809 aa13.89□□□□□ -0.19
CACNB3-213ENST00000550064 SLF1Q9BQI6 1058 aa13.89□□□□□ -0.19
CACNB3-213ENST00000550064 RANBP17Q9H2T7 1088 aaKnown RBP13.89□□□□□ -0.19
CACNB3-213ENST00000550064 RPAP3Q9H6T3 665 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-213ENST00000550064 RIC8AQ9NPQ8 531 aa13.89□□□□□ -0.19
CACNB3-213ENST00000550064 NOL7Q9UMY1 257 aaKnown RBP13.89□□□□□ -0.19
CACNB3-213ENST00000550064 CCDC194A0A1B0GVG4 234 aa13.88□□□□□ -0.19
CACNB3-213ENST00000550064 SPTLC2O15270 562 aa13.88□□□□□ -0.19
CACNB3-213ENST00000550064 PTPAQ15257 358 aa13.88□□□□□ -0.19
CACNB3-213ENST00000550064 SH3D19Q5HYK7 790 aa13.88□□□□□ -0.19
CACNB3-213ENST00000550064 LDLRAD1Q5T700 205 aa13.88□□□□□ -0.19
CACNB3-213ENST00000550064 CCDC174Q6PII3 467 aa13.88□□□□□ -0.19
CACNB3-213ENST00000550064 KRT25Q7Z3Z0 450 aa13.88□□□□□ -0.19
CACNB3-213ENST00000550064 PRPF38AQ8NAV1 312 aaKnown RBP13.88□□□□□ -0.19
CACNB3-213ENST00000550064 BICD2Q8TD16 824 aa13.88□□□□□ -0.19
CACNB3-213ENST00000550064 TANGO6Q9C0B7 1094 aa13.88□□□□□ -0.19
CACNB3-213ENST00000550064 TMEM260Q9NX78 707 aa13.88□□□□□ -0.19
CACNB3-213ENST00000550064 TMOD4Q9NZQ9 345 aa13.88□□□□□ -0.19
CACNB3-213ENST00000550064 BIN2Q9UBW5 565 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-213ENST00000550064 PCDHB6Q9Y5E3 794 aa13.88□□□□□ -0.19
CACNB3-213ENST00000550064 SMCHD1A6NHR9 2005 aa13.87□□□□□ -0.19
CACNB3-213ENST00000550064 GOLGA6L4A6NEF3 574 aa13.87□□□□□ -0.19
CACNB3-213ENST00000550064 WNT7AO00755 349 aa13.87□□□□□ -0.19
CACNB3-213ENST00000550064 TAL1P17542 331 aaPredicted RBP13.87□□□□□ -0.19
CACNB3-213ENST00000550064 ME1P48163 572 aa13.87□□□□□ -0.19
CACNB3-213ENST00000550064 TRAPPC10P48553 1259 aa13.87□□□□□ -0.19
CACNB3-213ENST00000550064 MRPL12P52815 198 aaKnown RBP13.87□□□□□ -0.19
CACNB3-213ENST00000550064 PPATQ06203 517 aa13.87□□□□□ -0.19
CACNB3-213ENST00000550064 USH1GQ495M9 461 aa13.87□□□□□ -0.19
CACNB3-213ENST00000550064 TTC38Q5R3I4 469 aa13.87□□□□□ -0.19
CACNB3-213ENST00000550064 JAKMIP3Q5VZ66 844 aa13.87□□□□□ -0.19
CACNB3-213ENST00000550064 ERO1BQ86YB8 467 aa13.87□□□□□ -0.19
CACNB3-213ENST00000550064 REXO1Q8N1G1 1221 aaKnown RBP13.87□□□□□ -0.19
CACNB3-213ENST00000550064 RBM46Q8TBY0 533 aaKnown RBP13.87□□□□□ -0.19
CACNB3-213ENST00000550064 KCNG4Q8TDN1 519 aa13.87□□□□□ -0.19
CACNB3-213ENST00000550064 CUL5Q93034 780 aa13.87□□□□□ -0.19
CACNB3-213ENST00000550064 PSTPIP2Q9H939 334 aa13.87□□□□□ -0.19
CACNB3-213ENST00000550064 ZNF408Q9H9D4 720 aa13.87□□□□□ -0.19
CACNB3-213ENST00000550064 PCDHA7Q9UN72 937 aa13.87□□□□□ -0.19
CACNB3-213ENST00000550064 PTPRFP10586 1907 aa13.86□□□□□ -0.19
CACNB3-213ENST00000550064 PARP14Q460N5 1801 aa13.86□□□□□ -0.19
CACNB3-213ENST00000550064 SPDYE5A6NIY4 337 aa13.86□□□□□ -0.19
CACNB3-213ENST00000550064 FLOT1O75955 427 aa13.86□□□□□ -0.19
CACNB3-213ENST00000550064 TRAF1Q13077 416 aa13.86□□□□□ -0.19
CACNB3-213ENST00000550064 NONOQ15233 471 aaKnown RBP eCLIP13.86□□□□□ -0.19
CACNB3-213ENST00000550064 ZNF174Q15697 407 aa13.86□□□□□ -0.19
CACNB3-213ENST00000550064 UBE2SQ16763 222 aa13.86□□□□□ -0.19
CACNB3-213ENST00000550064 OTUD5Q96G74 571 aa13.86□□□□□ -0.19
CACNB3-213ENST00000550064 GLT8D2Q9H1C3 349 aa13.86□□□□□ -0.19
CACNB3-213ENST00000550064 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.86□□□□□ -0.19
CACNB3-213ENST00000550064 PPP1R9AQ9ULJ8 1098 aa13.86□□□□□ -0.19
CACNB3-213ENST00000550064 IRF6O14896 467 aa13.85□□□□□ -0.19
CACNB3-213ENST00000550064 PPP6R2O75170 966 aa13.85□□□□□ -0.19
CACNB3-213ENST00000550064 MARCKSP29966 332 aaPredicted RBP13.85□□□□□ -0.19
CACNB3-213ENST00000550064 CLK2P49760 499 aaKnown RBP13.85□□□□□ -0.19
CACNB3-213ENST00000550064 INF2Q27J81 1249 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms