RNA–Protein interactions for RNA: ENST00000549499.1

FGD6-205, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 1 (best) BASIC

Gene FGD6, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-205ENST00000549499 ZNF200P98182 395 aaPredicted RBP8.37□□□□□ -1.07
FGD6-205ENST00000549499 TRIM43Q96BQ3 446 aaPredicted RBP8.37□□□□□ -1.07
FGD6-205ENST00000549499 VCPKMTQ9H867 229 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 SENP2Q9HC62 589 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 DIAPH3Q9NSV4 1193 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 CDK5RAP2Q96SN8 1893 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 VWA5AO00534 786 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 RNF113AO15541 343 aaKnown RBP8.37□□□□□ -1.07
FGD6-205ENST00000549499 CNMDO75829 334 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 USP38Q8NB14 1042 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 GPATCH3Q96I76 525 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 DDX20Q9UHI6 824 aaKnown RBP8.37□□□□□ -1.07
FGD6-205ENST00000549499 TACC3Q9Y6A5 838 aa8.37□□□□□ -1.07
FGD6-205ENST00000549499 FGAP02671 866 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 MAPK4P31152 587 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 GRIN2CQ14957 1233 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 LRRC41Q15345 812 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 TMEM179Q6ZVK1 233 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 PROCA1Q8NCQ7 364 aaPredicted RBP8.36□□□□□ -1.07
FGD6-205ENST00000549499 APOL5Q9BWW9 433 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 BMP2KQ9NSY1 1161 aaPredicted RBP8.36□□□□□ -1.07
FGD6-205ENST00000549499 BAZ2AQ9UIF9 1905 aaKnown RBP8.36□□□□□ -1.07
FGD6-205ENST00000549499 MTX1Q13505 466 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 TTF1Q15361 905 aaPredicted RBP8.36□□□□□ -1.07
FGD6-205ENST00000549499 HSP90AB4PQ58FF6 505 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 ARNTL2Q8WYA1 636 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 FAM163AQ96GL9 167 aaPredicted RBP8.36□□□□□ -1.07
FGD6-205ENST00000549499 MAML3Q96JK9 1138 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 TRERF1Q96PN7 1200 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 ZBED2Q9BTP6 218 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 RABGAP1Q9Y3P9 1069 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 CEP250Q9BV73 2442 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 C19orf81C9J6K1 198 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 DDX39AO00148 427 aaKnown RBP8.36□□□□□ -1.07
FGD6-205ENST00000549499 PPARAQ07869 468 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 RPAP2Q8IXW5 612 aaPredicted RBP8.36□□□□□ -1.07
FGD6-205ENST00000549499 TDHQ8IZJ6 230 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 APBA2Q99767 749 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.36□□□□□ -1.07
FGD6-205ENST00000549499 TELO2Q9Y4R8 837 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 ZBED9Q6R2W3 1325 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 ATRNL1Q5VV63 1379 aa8.36□□□□□ -1.07
FGD6-205ENST00000549499 EPG5Q9HCE0 2579 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 FOSL2P15408 326 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 MKRN4PQ13434 485 aaPredicted RBP8.35□□□□□ -1.07
FGD6-205ENST00000549499 ZNF365Q70YC5 407 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 TINF2Q9BSI4 451 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 NACAP1Q9BZK3 213 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 MCM3APO60318 1980 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 BMP3P12645 472 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 FGD1P98174 961 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 LY6KQ17RY6 165 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 LBX2Q6XYB7 198 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 KBTBD3Q8NAB2 608 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 PXYLP1Q8TE99 480 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 GLT1D1Q96MS3 346 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 HAUS7Q99871 368 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 KANSL2Q9H9L4 492 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 TCRBV5S4A2TA0A5A2 114 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 ZBED4O75132 1171 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 TRIM50Q86XT4 487 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 GPKOWQ92917 476 aaPredicted RBP eCLIP8.35□□□□□ -1.07
FGD6-205ENST00000549499 SLF1Q9BQI6 1058 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 FREM2Q5SZK8 3169 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 LAMA1P25391 3075 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 TET1Q8NFU7 2136 aa8.35□□□□□ -1.07
FGD6-205ENST00000549499 TRANK1O15050 2925 aa8.34□□□□□ -1.07
FGD6-205ENST00000549499 ZNF286BP0CG31 522 aa8.34□□□□□ -1.07
FGD6-205ENST00000549499 USP14P54578 494 aa8.34□□□□□ -1.07
FGD6-205ENST00000549499 RRP1P56182 461 aaKnown RBP8.34□□□□□ -1.07
FGD6-205ENST00000549499 PPP4CP60510 307 aa8.34□□□□□ -1.07
FGD6-205ENST00000549499 UTP14CQ5TAP6 766 aaKnown RBP8.34□□□□□ -1.07
FGD6-205ENST00000549499 STAG2Q8N3U4 1231 aa8.34□□□□□ -1.07
FGD6-205ENST00000549499 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.34□□□□□ -1.07
FGD6-205ENST00000549499 PAK6Q9NQU5 681 aaPredicted RBP8.34□□□□□ -1.07
FGD6-205ENST00000549499 TMEM265A0A087WTH1 108 aa8.34□□□□□ -1.07
FGD6-205ENST00000549499 DSG3P32926 999 aa8.34□□□□□ -1.07
FGD6-205ENST00000549499 ARMCX2Q7L311 632 aa8.34□□□□□ -1.07
FGD6-205ENST00000549499 MYOCDQ8IZQ8 938 aa8.34□□□□□ -1.07
FGD6-205ENST00000549499 GOPCQ9HD26 462 aa8.34□□□□□ -1.07
FGD6-205ENST00000549499 ATP5JP18859 108 aa8.34□□□□□ -1.08
FGD6-205ENST00000549499 MNX1P50219 401 aaPredicted RBP8.34□□□□□ -1.08
FGD6-205ENST00000549499 CDX2Q99626 313 aaPredicted RBP8.34□□□□□ -1.08
FGD6-205ENST00000549499 KIAA1683Q9H0B3 1180 aa8.34□□□□□ -1.08
FGD6-205ENST00000549499 A1CFQ9NQ94 594 aaKnown RBP8.34□□□□□ -1.08
FGD6-205ENST00000549499 NOP58Q9Y2X3 529 aaKnown RBP8.34□□□□□ -1.08
FGD6-205ENST00000549499 LRRC37AA6NMS7 1700 aa8.34□□□□□ -1.08
FGD6-205ENST00000549499 NOL9Q5SY16 702 aaKnown RBP8.33□□□□□ -1.08
FGD6-205ENST00000549499 NFXL1Q6ZNB6 911 aa8.33□□□□□ -1.08
FGD6-205ENST00000549499 APPBP2Q92624 585 aa8.33□□□□□ -1.08
FGD6-205ENST00000549499 RNF19AQ9NV58 838 aa8.33□□□□□ -1.08
FGD6-205ENST00000549499 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.33□□□□□ -1.08
FGD6-205ENST00000549499 DCHS1Q96JQ0 3298 aa8.33□□□□□ -1.08
FGD6-205ENST00000549499 SALL1Q9NSC2 1324 aa8.33□□□□□ -1.08
FGD6-205ENST00000549499 CENPBP07199 599 aaPredicted RBP8.33□□□□□ -1.08
FGD6-205ENST00000549499 STAT2P52630 851 aa8.33□□□□□ -1.08
FGD6-205ENST00000549499 MRIQ9BWK5 157 aa8.33□□□□□ -1.08
FGD6-205ENST00000549499 FAM86C2PA6NEL3 165 aa8.33□□□□□ -1.08
FGD6-205ENST00000549499 TNFAIP2Q03169 654 aa8.33□□□□□ -1.08
FGD6-205ENST00000549499 RNF180Q86T96 592 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms