RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 DCP1AQ9NPI6 582 aaPredicted RBP10.79□□□□□ -0.68
UBE2N-203ENST00000549490 MYH1P12882 1939 aa10.79□□□□□ -0.68
UBE2N-203ENST00000549490 ASTN1O14525 1302 aa10.79□□□□□ -0.68
UBE2N-203ENST00000549490 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.78□□□□□ -0.68
UBE2N-203ENST00000549490 SURF6O75683 361 aaKnown RBP10.78□□□□□ -0.68
UBE2N-203ENST00000549490 CABYRO75952 493 aa10.78□□□□□ -0.68
UBE2N-203ENST00000549490 CT47B1P0C2W7 299 aaPredicted RBP10.78□□□□□ -0.68
UBE2N-203ENST00000549490 TAP1Q03518 808 aa10.78□□□□□ -0.68
UBE2N-203ENST00000549490 GRB10Q13322 594 aa10.78□□□□□ -0.68
UBE2N-203ENST00000549490 ARMCX2Q7L311 632 aa10.78□□□□□ -0.68
UBE2N-203ENST00000549490 SSH3Q8TE77 659 aa10.78□□□□□ -0.68
UBE2N-203ENST00000549490 CCDC17Q96LX7 622 aa10.78□□□□□ -0.68
UBE2N-203ENST00000549490 RAD21O60216 631 aa10.77□□□□□ -0.69
UBE2N-203ENST00000549490 LPXNO60711 386 aa10.77□□□□□ -0.69
UBE2N-203ENST00000549490 BCAR3O75815 825 aa10.77□□□□□ -0.69
UBE2N-203ENST00000549490 PDE6AP16499 860 aa10.77□□□□□ -0.69
UBE2N-203ENST00000549490 PTGS1P23219 599 aa10.77□□□□□ -0.69
UBE2N-203ENST00000549490 SLC4A3P48751 1232 aa10.77□□□□□ -0.69
UBE2N-203ENST00000549490 CDK8P49336 464 aa10.77□□□□□ -0.69
UBE2N-203ENST00000549490 RARSP54136 660 aaKnown RBP10.77□□□□□ -0.69
UBE2N-203ENST00000549490 NHLH1Q02575 133 aa10.77□□□□□ -0.69
UBE2N-203ENST00000549490 TNFAIP2Q03169 654 aa10.77□□□□□ -0.69
UBE2N-203ENST00000549490 NOL8Q76FK4 1167 aaKnown RBP10.77□□□□□ -0.69
UBE2N-203ENST00000549490 SPRED2Q7Z698 418 aa10.77□□□□□ -0.69
UBE2N-203ENST00000549490 CCDC144CPQ8IYA2 1237 aa10.77□□□□□ -0.69
UBE2N-203ENST00000549490 LCORLQ8N3X6 602 aa10.77□□□□□ -0.69
UBE2N-203ENST00000549490 UIMC1Q96RL1 719 aa10.77□□□□□ -0.69
UBE2N-203ENST00000549490 NUP88Q99567 741 aaPredicted RBP10.77□□□□□ -0.69
UBE2N-203ENST00000549490 SLF1Q9BQI6 1058 aa10.77□□□□□ -0.69
UBE2N-203ENST00000549490 KANSL2Q9H9L4 492 aa10.77□□□□□ -0.69
UBE2N-203ENST00000549490 GOPCQ9HD26 462 aa10.77□□□□□ -0.69
UBE2N-203ENST00000549490 TNNQ9UQP3 1299 aa10.77□□□□□ -0.69
UBE2N-203ENST00000549490 MYO5AQ9Y4I1 1855 aaKnown RBP10.76□□□□□ -0.69
UBE2N-203ENST00000549490 ZNFX1Q9P2E3 1918 aaKnown RBP10.76□□□□□ -0.69
UBE2N-203ENST00000549490 LRRC37A2A6NM11 1700 aa10.76□□□□□ -0.69
UBE2N-203ENST00000549490 CYP2D7A0A087X1C5 515 aa10.76□□□□□ -0.69
UBE2N-203ENST00000549490 ATP2A1O14983 1001 aa10.76□□□□□ -0.69
UBE2N-203ENST00000549490 PRKAB2O43741 272 aa10.76□□□□□ -0.69
UBE2N-203ENST00000549490 PFKMP08237 780 aa10.76□□□□□ -0.69
UBE2N-203ENST00000549490 PSMC6P62333 389 aa10.76□□□□□ -0.69
UBE2N-203ENST00000549490 ATP8B2P98198 1209 aa10.76□□□□□ -0.69
UBE2N-203ENST00000549490 CNTN2Q02246 1040 aa10.76□□□□□ -0.69
UBE2N-203ENST00000549490 FSCN1Q16658 493 aaKnown RBP10.76□□□□□ -0.69
UBE2N-203ENST00000549490 SLC9C2Q5TAH2 1124 aa10.76□□□□□ -0.69
UBE2N-203ENST00000549490 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.76□□□□□ -0.694e-6■■■■□ 26
UBE2N-203ENST00000549490 DEFB128Q7Z7B8 93 aa10.76□□□□□ -0.69
UBE2N-203ENST00000549490 FAM178BQ8IXR5 827 aa10.76□□□□□ -0.69
UBE2N-203ENST00000549490 CPXCR1Q8N123 301 aa10.76□□□□□ -0.69
UBE2N-203ENST00000549490 GJD3Q8N144 294 aa10.76□□□□□ -0.69
UBE2N-203ENST00000549490 ANKRD35Q8N283 1001 aa10.76□□□□□ -0.69
UBE2N-203ENST00000549490 PHOSPHO2Q8TCD6 241 aa10.76□□□□□ -0.69
UBE2N-203ENST00000549490 SEZ6LQ9BYH1 1024 aa10.76□□□□□ -0.69
UBE2N-203ENST00000549490 ALDH8A1Q9H2A2 487 aaPredicted RBP10.76□□□□□ -0.69
UBE2N-203ENST00000549490 GNEQ9Y223 722 aaKnown RBP10.76□□□□□ -0.69
UBE2N-203ENST00000549490 NOP58Q9Y2X3 529 aaKnown RBP10.76□□□□□ -0.69
UBE2N-203ENST00000549490 ZNF532Q9HCE3 1301 aa10.76□□□□□ -0.69
UBE2N-203ENST00000549490 TCRBV5S4A2TA0A5A2 114 aa10.75□□□□□ -0.69
UBE2N-203ENST00000549490 DYNC1LI2O43237 492 aaPredicted RBP10.75□□□□□ -0.69
UBE2N-203ENST00000549490 CYP2C9P11712 490 aa10.75□□□□□ -0.69
UBE2N-203ENST00000549490 TLK2Q86UE8 772 aa10.75□□□□□ -0.69
UBE2N-203ENST00000549490 HERC6Q8IVU3 1022 aa10.75□□□□□ -0.69
UBE2N-203ENST00000549490 PRPF38AQ8NAV1 312 aaKnown RBP10.75□□□□□ -0.69
UBE2N-203ENST00000549490 FBXL18Q96ME1 805 aa10.75□□□□□ -0.69
UBE2N-203ENST00000549490 SLC9A7Q96T83 725 aa10.75□□□□□ -0.69
UBE2N-203ENST00000549490 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.75□□□□□ -0.69
UBE2N-203ENST00000549490 AP5M1Q9H0R1 490 aa10.75□□□□□ -0.69
UBE2N-203ENST00000549490 ARMT1Q9H993 441 aa10.75□□□□□ -0.69
UBE2N-203ENST00000549490 RAVER2Q9HCJ3 691 aaKnown RBP10.75□□□□□ -0.69
UBE2N-203ENST00000549490 GBF1Q92538 1859 aa10.74□□□□□ -0.69
UBE2N-203ENST00000549490 KIF28PB7ZC32 967 aa10.74□□□□□ -0.69
UBE2N-203ENST00000549490 ZEB2O60315 1214 aa10.74□□□□□ -0.69
UBE2N-203ENST00000549490 ZBED4O75132 1171 aa10.74□□□□□ -0.69
UBE2N-203ENST00000549490 ACTN1P12814 892 aa10.74□□□□□ -0.69
UBE2N-203ENST00000549490 ALADP13716 330 aa10.74□□□□□ -0.69
UBE2N-203ENST00000549490 TRIM27P14373 513 aa10.74□□□□□ -0.69
UBE2N-203ENST00000549490 SMPD1P17405 629 aa10.74□□□□□ -0.69
UBE2N-203ENST00000549490 TMEM63BQ5T3F8 832 aa10.74□□□□□ -0.69
UBE2N-203ENST00000549490 C12orf60Q5U649 245 aa10.74□□□□□ -0.69
UBE2N-203ENST00000549490 C16orf86Q6ZW13 317 aa10.74□□□□□ -0.69
UBE2N-203ENST00000549490 UBE2ZQ9H832 354 aaPredicted RBP10.74□□□□□ -0.69
UBE2N-203ENST00000549490 TRMT13Q9NUP7 481 aaKnown RBP10.74□□□□□ -0.69
UBE2N-203ENST00000549490 FBXO40Q9UH90 709 aa10.74□□□□□ -0.69
UBE2N-203ENST00000549490 BRWD1Q9NSI6 2320 aa10.73□□□□□ -0.69
UBE2N-203ENST00000549490 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.73□□□□□ -0.69
UBE2N-203ENST00000549490 SOWAHBA6NEL2 793 aa10.73□□□□□ -0.69
UBE2N-203ENST00000549490 USP17L12C9JPN9 530 aa10.73□□□□□ -0.69
UBE2N-203ENST00000549490 USP17L21D6R901 530 aa10.73□□□□□ -0.69
UBE2N-203ENST00000549490 F5H6K3 240 aa10.73□□□□□ -0.69
UBE2N-203ENST00000549490 NDUFB10O96000 172 aa10.73□□□□□ -0.69
UBE2N-203ENST00000549490 SUPT20HL2P0C7V6 817 aa10.73□□□□□ -0.69
UBE2N-203ENST00000549490 SSTR3P32745 418 aaPredicted RBP10.73□□□□□ -0.69
UBE2N-203ENST00000549490 KLRC3Q07444 240 aa10.73□□□□□ -0.69
UBE2N-203ENST00000549490 TTF1Q15361 905 aaPredicted RBP10.73□□□□□ -0.69
UBE2N-203ENST00000549490 CSPP1Q1MSJ5 1256 aa10.73□□□□□ -0.69
UBE2N-203ENST00000549490 FAM133AQ8N9E0 248 aa10.73□□□□□ -0.69
UBE2N-203ENST00000549490 CHST13Q8NET6 341 aa10.73□□□□□ -0.69
UBE2N-203ENST00000549490 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.73□□□□□ -0.69
UBE2N-203ENST00000549490 KIFC2Q96AC6 838 aa10.73□□□□□ -0.69
UBE2N-203ENST00000549490 SLC38A10Q9HBR0 1119 aa10.73□□□□□ -0.69
UBE2N-203ENST00000549490 PDGFCQ9NRA1 345 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms