RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 MCCP23508 829 aa20.6■□□□□ 0.89
CHMP1A-205ENST00000548650 AAMPQ13685 434 aa20.6■□□□□ 0.89
CHMP1A-205ENST00000548650 MCMDC2Q4G0Z9 681 aa20.6■□□□□ 0.89
CHMP1A-205ENST00000548650 Q7L0L9 218 aa20.6■□□□□ 0.89
CHMP1A-205ENST00000548650 ZNF589Q86UQ0 364 aaPredicted RBP20.6■□□□□ 0.89
CHMP1A-205ENST00000548650 TICAM2Q86XR7 235 aa20.6■□□□□ 0.89
CHMP1A-205ENST00000548650 STAG1Q8WVM7 1258 aa20.6■□□□□ 0.89
CHMP1A-205ENST00000548650 CHMP4CQ96CF2 233 aa20.6■□□□□ 0.89
CHMP1A-205ENST00000548650 ACAD9Q9H845 621 aa20.6■□□□□ 0.89
CHMP1A-205ENST00000548650 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.6■□□□□ 0.89
CHMP1A-205ENST00000548650 ADCY6O43306 1168 aa20.59■□□□□ 0.89
CHMP1A-205ENST00000548650 RANBP6O60518 1105 aaKnown RBP20.59■□□□□ 0.89
CHMP1A-205ENST00000548650 IKQ13123 557 aaPredicted RBP20.59■□□□□ 0.89
CHMP1A-205ENST00000548650 NMIQ13287 307 aaPredicted RBP20.59■□□□□ 0.89
CHMP1A-205ENST00000548650 KCTD1Q719H9 257 aa20.59■□□□□ 0.89
CHMP1A-205ENST00000548650 SH3RF1Q7Z6J0 888 aa20.59■□□□□ 0.89
CHMP1A-205ENST00000548650 DEFB123Q8N688 67 aa20.59■□□□□ 0.89
CHMP1A-205ENST00000548650 CHURC1Q8WUH1 139 aa20.59■□□□□ 0.89
CHMP1A-205ENST00000548650 AGBL1Q96MI9 1066 aa20.59■□□□□ 0.89
CHMP1A-205ENST00000548650 RNF146Q9NTX7 359 aa20.59■□□□□ 0.89
CHMP1A-205ENST00000548650 FAM184BQ9ULE4 1060 aa20.59■□□□□ 0.89
CHMP1A-205ENST00000548650 COL6A3P12111 3177 aa20.59■□□□□ 0.89
CHMP1A-205ENST00000548650 CCDC171Q6TFL3 1326 aa20.58■□□□□ 0.89
CHMP1A-205ENST00000548650 TRIM43BA6NCK2 446 aa20.58■□□□□ 0.89
CHMP1A-205ENST00000548650 FGAP02671 866 aa20.58■□□□□ 0.89
CHMP1A-205ENST00000548650 CNTN2Q02246 1040 aa20.58■□□□□ 0.89
CHMP1A-205ENST00000548650 TLE2Q04725 743 aa20.58■□□□□ 0.89
CHMP1A-205ENST00000548650 ACVR2BQ13705 512 aa20.58■□□□□ 0.89
CHMP1A-205ENST00000548650 RCSD1Q6JBY9 416 aa20.58■□□□□ 0.89
CHMP1A-205ENST00000548650 ARMCX2Q7L311 632 aa20.58■□□□□ 0.89
CHMP1A-205ENST00000548650 FAM133AQ8N9E0 248 aa20.58■□□□□ 0.89
CHMP1A-205ENST00000548650 KLHDC9Q8NEP7 349 aa20.58■□□□□ 0.89
CHMP1A-205ENST00000548650 TRIM43Q96BQ3 446 aaPredicted RBP20.58■□□□□ 0.89
CHMP1A-205ENST00000548650 KATNBL1Q9H079 304 aa20.58■□□□□ 0.89
CHMP1A-205ENST00000548650 A1CFQ9NQ94 594 aaKnown RBP20.58■□□□□ 0.89
CHMP1A-205ENST00000548650 PRR12Q9ULL5 1215 aa20.58■□□□□ 0.89
CHMP1A-205ENST00000548650 MYADML2A6NDP7 307 aa20.57■□□□□ 0.88
CHMP1A-205ENST00000548650 DUSP11O75319 330 aaKnown RBP20.57■□□□□ 0.88
CHMP1A-205ENST00000548650 HSPD1P10809 573 aaKnown RBP20.57■□□□□ 0.88
CHMP1A-205ENST00000548650 CST5P28325 142 aaPredicted RBP20.57■□□□□ 0.88
CHMP1A-205ENST00000548650 CCSAPQ6IQ19 270 aaPredicted RBP20.57■□□□□ 0.88
CHMP1A-205ENST00000548650 TSEN34Q9BSV6 310 aaKnown RBP20.57■□□□□ 0.88
CHMP1A-205ENST00000548650 ABHD16BQ9H3Z7 469 aa20.57■□□□□ 0.88
CHMP1A-205ENST00000548650 ASTN1O14525 1302 aa20.56■□□□□ 0.88
CHMP1A-205ENST00000548650 ACLYP53396 1101 aa20.56■□□□□ 0.88
CHMP1A-205ENST00000548650 SNAP25P60880 206 aa20.56■□□□□ 0.88
CHMP1A-205ENST00000548650 TKFCQ3LXA3 575 aa20.56■□□□□ 0.88
CHMP1A-205ENST00000548650 CCDC174Q6PII3 467 aa20.56■□□□□ 0.88
CHMP1A-205ENST00000548650 CCDC144CPQ8IYA2 1237 aa20.56■□□□□ 0.88
CHMP1A-205ENST00000548650 DCAF4Q8WV16 495 aa20.56■□□□□ 0.88
CHMP1A-205ENST00000548650 BADQ92934 168 aa20.56■□□□□ 0.88
CHMP1A-205ENST00000548650 UPF3AQ9H1J1 476 aaKnown RBP20.56■□□□□ 0.88
CHMP1A-205ENST00000548650 LAMA2P24043 3122 aaKnown RBP20.55■□□□□ 0.88
CHMP1A-205ENST00000548650 MOXD2PA6NHM9 499 aa20.55■□□□□ 0.88
CHMP1A-205ENST00000548650 TRIM6-TRIM34B2RNG4 842 aa20.55■□□□□ 0.88
CHMP1A-205ENST00000548650 POTEB2H3BUK9 544 aa20.55■□□□□ 0.88
CHMP1A-205ENST00000548650 CLTBP09497 229 aa20.55■□□□□ 0.88
CHMP1A-205ENST00000548650 IRX5P78411 483 aaPredicted RBP20.55■□□□□ 0.88
CHMP1A-205ENST00000548650 CCDC96Q2M329 555 aa20.55■□□□□ 0.88
CHMP1A-205ENST00000548650 CCDC144BQ3MJ40 725 aa20.55■□□□□ 0.88
CHMP1A-205ENST00000548650 B4GALNT3Q6L9W6 998 aa20.55■□□□□ 0.88
CHMP1A-205ENST00000548650 TBC1D10CQ8IV04 446 aa20.55■□□□□ 0.88
CHMP1A-205ENST00000548650 STARD7Q9NQZ5 370 aa20.55■□□□□ 0.88
CHMP1A-205ENST00000548650 TOMM22Q9NS69 142 aa20.55■□□□□ 0.88
CHMP1A-205ENST00000548650 MTMR10Q9NXD2 777 aa20.55■□□□□ 0.88
CHMP1A-205ENST00000548650 MTMR7Q9Y216 660 aa20.55■□□□□ 0.88
CHMP1A-205ENST00000548650 SOWAHBA6NEL2 793 aa20.54■□□□□ 0.88
CHMP1A-205ENST00000548650 PQBP1O60828 265 aaKnown RBP20.54■□□□□ 0.88
CHMP1A-205ENST00000548650 IGHDP01880 384 aa20.54■□□□□ 0.88
CHMP1A-205ENST00000548650 ALAS1P13196 640 aa20.54■□□□□ 0.88
CHMP1A-205ENST00000548650 ITGB8P26012 769 aa20.54■□□□□ 0.88
CHMP1A-205ENST00000548650 HAND2P61296 217 aa20.54■□□□□ 0.88
CHMP1A-205ENST00000548650 MUM1L1Q5H9M0 696 aa20.54■□□□□ 0.88
CHMP1A-205ENST00000548650 RRP12Q5JTH9 1297 aaKnown RBP20.54■□□□□ 0.88
CHMP1A-205ENST00000548650 C9orf50Q5SZB4 431 aa20.54■□□□□ 0.88
CHMP1A-205ENST00000548650 CHD1LQ86WJ1 897 aa20.54■□□□□ 0.88
CHMP1A-205ENST00000548650 PLEKHM2Q8IWE5 1019 aa20.54■□□□□ 0.88
CHMP1A-205ENST00000548650 TRERF1Q96PN7 1200 aa20.54■□□□□ 0.88
CHMP1A-205ENST00000548650 TMEM47Q9BQJ4 181 aa20.54■□□□□ 0.88
CHMP1A-205ENST00000548650 RANBP17Q9H2T7 1088 aaKnown RBP20.54■□□□□ 0.88
CHMP1A-205ENST00000548650 RWDD1Q9H446 243 aaPredicted RBP20.54■□□□□ 0.88
CHMP1A-205ENST00000548650 TCP11L1Q9NUJ3 509 aa20.54■□□□□ 0.88
CHMP1A-205ENST00000548650 KIAA0355O15063 1070 aa20.53■□□□□ 0.88
CHMP1A-205ENST00000548650 C6orf222P0C671 652 aaPredicted RBP20.53■□□□□ 0.88
CHMP1A-205ENST00000548650 TOP1P11387 765 aaKnown RBP20.53■□□□□ 0.88
CHMP1A-205ENST00000548650 NUCB1Q02818 461 aa20.53■□□□□ 0.88
CHMP1A-205ENST00000548650 SHHQ15465 462 aa20.53■□□□□ 0.88
CHMP1A-205ENST00000548650 KCNA10Q16322 511 aa20.53■□□□□ 0.88
CHMP1A-205ENST00000548650 TTBK2Q6IQ55 1244 aa20.53■□□□□ 0.88
CHMP1A-205ENST00000548650 ANKRD33Q7Z3H0 272 aa20.53■□□□□ 0.88
CHMP1A-205ENST00000548650 RILPL2Q969X0 211 aa20.53■□□□□ 0.88
CHMP1A-205ENST00000548650 OSBPL3Q9H4L5 887 aa20.53■□□□□ 0.88
CHMP1A-205ENST00000548650 CCPG1Q9ULG6 757 aa20.53■□□□□ 0.88
CHMP1A-205ENST00000548650 CTAGE5O15320 804 aa20.52■□□□□ 0.88
CHMP1A-205ENST00000548650 ICAM1P05362 532 aa20.52■□□□□ 0.88
CHMP1A-205ENST00000548650 SDSP20132 328 aa20.52■□□□□ 0.88
CHMP1A-205ENST00000548650 GJA9P57773 515 aa20.52■□□□□ 0.88
CHMP1A-205ENST00000548650 BTNL9Q6UXG8 535 aa20.52■□□□□ 0.88
CHMP1A-205ENST00000548650 EXOC6Q8TAG9 804 aa20.52■□□□□ 0.88
CHMP1A-205ENST00000548650 NUP133Q8WUM0 1156 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms