RNA–Protein interactions for RNA: ENST00000548473.1

AC007540.1-201, humanhuman

TSL 3 BASIC

Gene AC007540.1, Length 507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007540.1-201ENST00000548473 CNGA1P29973 690 aa14.03□□□□□ -0.16
AC007540.1-201ENST00000548473 PRAMEF19Q5SWL8 479 aa14.03□□□□□ -0.16
AC007540.1-201ENST00000548473 IFIT1BQ5T764 474 aaKnown RBP14.03□□□□□ -0.16
AC007540.1-201ENST00000548473 CASC1Q6TDU7 716 aa14.03□□□□□ -0.16
AC007540.1-201ENST00000548473 CHST3Q7LGC8 479 aa14.03□□□□□ -0.16
AC007540.1-201ENST00000548473 ANKRD35Q8N283 1001 aa14.03□□□□□ -0.16
AC007540.1-201ENST00000548473 CHST13Q8NET6 341 aa14.03□□□□□ -0.16
AC007540.1-201ENST00000548473 NCOA7Q8NI08 942 aa14.03□□□□□ -0.16
AC007540.1-201ENST00000548473 CRISPLD2Q9H0B8 497 aa14.03□□□□□ -0.16
AC007540.1-201ENST00000548473 FBXO40Q9UH90 709 aa14.03□□□□□ -0.16
AC007540.1-201ENST00000548473 IFIT3O14879 490 aaKnown RBP14.02□□□□□ -0.17
AC007540.1-201ENST00000548473 SLC27A2O14975 620 aa14.02□□□□□ -0.17
AC007540.1-201ENST00000548473 FARP2O94887 1054 aaPredicted RBP14.02□□□□□ -0.17
AC007540.1-201ENST00000548473 TAL1P17542 331 aaPredicted RBP14.02□□□□□ -0.17
AC007540.1-201ENST00000548473 SEC23AQ15436 765 aa14.02□□□□□ -0.17
AC007540.1-201ENST00000548473 ERICH6BQ5W0A0 696 aa14.02□□□□□ -0.17
AC007540.1-201ENST00000548473 TRPV1Q8NER1 839 aa14.02□□□□□ -0.17
AC007540.1-201ENST00000548473 TRERF1Q96PN7 1200 aa14.02□□□□□ -0.17
AC007540.1-201ENST00000548473 UBA5Q9GZZ9 404 aa14.02□□□□□ -0.17
AC007540.1-201ENST00000548473 RANBP17Q9H2T7 1088 aaKnown RBP14.02□□□□□ -0.17
AC007540.1-201ENST00000548473 CPVLQ9H3G5 476 aa14.02□□□□□ -0.17
AC007540.1-201ENST00000548473 RNF146Q9NTX7 359 aa14.02□□□□□ -0.17
AC007540.1-201ENST00000548473 CCPG1Q9ULG6 757 aa14.02□□□□□ -0.17
AC007540.1-201ENST00000548473 DIS3Q9Y2L1 958 aaKnown RBP14.02□□□□□ -0.17
AC007540.1-201ENST00000548473 ICAM1P05362 532 aa14.01□□□□□ -0.17
AC007540.1-201ENST00000548473 NECTIN1Q15223 517 aa14.01□□□□□ -0.17
AC007540.1-201ENST00000548473 TKFCQ3LXA3 575 aa14.01□□□□□ -0.17
AC007540.1-201ENST00000548473 GPATCH4Q5T3I0 446 aaKnown RBP14.01□□□□□ -0.17
AC007540.1-201ENST00000548473 CREB3L3Q68CJ9 461 aa14.01□□□□□ -0.17
AC007540.1-201ENST00000548473 LHX8Q68G74 356 aa14.01□□□□□ -0.17
AC007540.1-201ENST00000548473 UBE2Q1Q7Z7E8 422 aa14.01□□□□□ -0.17
AC007540.1-201ENST00000548473 TINF2Q9BSI4 451 aa14.01□□□□□ -0.17
AC007540.1-201ENST00000548473 ACAD9Q9H845 621 aa14.01□□□□□ -0.17
AC007540.1-201ENST00000548473 OGDHLQ9ULD0 1010 aa14.01□□□□□ -0.17
AC007540.1-201ENST00000548473 ZNFX1Q9P2E3 1918 aaKnown RBP14.01□□□□□ -0.17
AC007540.1-201ENST00000548473 ZNF236Q9UL36 1845 aa14.01□□□□□ -0.17
AC007540.1-201ENST00000548473 PDE4DIPQ5VU43 2346 aa14.01□□□□□ -0.17
AC007540.1-201ENST00000548473 DNAJC25-GNG10A0A024R161 153 aa14□□□□□ -0.17
AC007540.1-201ENST00000548473 ERICH2A1L162 156 aa14□□□□□ -0.17
AC007540.1-201ENST00000548473 PARP1P09874 1014 aaKnown RBP14□□□□□ -0.17
AC007540.1-201ENST00000548473 CYBAP13498 195 aa14□□□□□ -0.17
AC007540.1-201ENST00000548473 CAPN2P17655 700 aa14□□□□□ -0.17
AC007540.1-201ENST00000548473 MUM1L1Q5H9M0 696 aa14□□□□□ -0.17
AC007540.1-201ENST00000548473 ANO1Q5XXA6 986 aa14□□□□□ -0.17
AC007540.1-201ENST00000548473 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14□□□□□ -0.17
AC007540.1-201ENST00000548473 MB21D2Q8IYB1 491 aaPredicted RBP14□□□□□ -0.17
AC007540.1-201ENST00000548473 PAWRQ96IZ0 340 aaKnown RBP14□□□□□ -0.17
AC007540.1-201ENST00000548473 SENP2Q9HC62 589 aa14□□□□□ -0.17
AC007540.1-201ENST00000548473 POTEB2H3BUK9 544 aa13.99□□□□□ -0.17
AC007540.1-201ENST00000548473 ANTXR2P58335 489 aa13.99□□□□□ -0.17
AC007540.1-201ENST00000548473 CNTN2Q02246 1040 aa13.99□□□□□ -0.17
AC007540.1-201ENST00000548473 WTAPQ15007 396 aa13.99□□□□□ -0.17
AC007540.1-201ENST00000548473 SART3Q15020 963 aaKnown RBP13.99□□□□□ -0.17
AC007540.1-201ENST00000548473 ASPRV1Q53RT3 343 aa13.99□□□□□ -0.17
AC007540.1-201ENST00000548473 TMEM67Q5HYA8 995 aa13.99□□□□□ -0.17
AC007540.1-201ENST00000548473 DIS3LQ8TF46 1054 aaKnown RBP13.99□□□□□ -0.17
AC007540.1-201ENST00000548473 VAT1LQ9HCJ6 419 aa13.99□□□□□ -0.17
AC007540.1-201ENST00000548473 A1CFQ9NQ94 594 aaKnown RBP13.99□□□□□ -0.17
AC007540.1-201ENST00000548473 DDX20Q9UHI6 824 aaKnown RBP13.99□□□□□ -0.17
AC007540.1-201ENST00000548473 DHX16O60231 1041 aaKnown RBP13.98□□□□□ -0.17
AC007540.1-201ENST00000548473 MNX1P50219 401 aaPredicted RBP13.98□□□□□ -0.17
AC007540.1-201ENST00000548473 COL9A3Q14050 684 aaPredicted RBP13.98□□□□□ -0.17
AC007540.1-201ENST00000548473 NSMFQ6X4W1 530 aa13.98□□□□□ -0.17
AC007540.1-201ENST00000548473 NECAB2Q7Z6G3 386 aa13.98□□□□□ -0.17
AC007540.1-201ENST00000548473 ADGRF4Q8IZF3 695 aa13.98□□□□□ -0.17
AC007540.1-201ENST00000548473 STAG2Q8N3U4 1231 aa13.98□□□□□ -0.17
AC007540.1-201ENST00000548473 ANKLE1Q8NAG6 615 aa13.98□□□□□ -0.17
AC007540.1-201ENST00000548473 IGDCC4Q8TDY8 1250 aa13.98□□□□□ -0.17
AC007540.1-201ENST00000548473 DPF3Q92784 378 aa13.98□□□□□ -0.17
AC007540.1-201ENST00000548473 FGD4Q96M96 766 aa13.98□□□□□ -0.17
AC007540.1-201ENST00000548473 GPHNQ9NQX3 736 aaPredicted RBP13.98□□□□□ -0.17
AC007540.1-201ENST00000548473 SEPT4O43236 478 aa13.97□□□□□ -0.17
AC007540.1-201ENST00000548473 PRC1O43663 620 aa13.97□□□□□ -0.17
AC007540.1-201ENST00000548473 MSCO60682 206 aa13.97□□□□□ -0.17
AC007540.1-201ENST00000548473 SNAI1O95863 264 aaPredicted RBP13.97□□□□□ -0.17
AC007540.1-201ENST00000548473 MCM5P33992 734 aa13.97□□□□□ -0.17
AC007540.1-201ENST00000548473 RNF20Q5VTR2 975 aa13.97□□□□□ -0.17
AC007540.1-201ENST00000548473 HTATIP2Q9BUP3 242 aa13.97□□□□□ -0.17
AC007540.1-201ENST00000548473 MAD2L2Q9UI95 211 aa13.97□□□□□ -0.17
AC007540.1-201ENST00000548473 CNPY2Q9Y2B0 182 aa13.97□□□□□ -0.17
AC007540.1-201ENST00000548473 PFASO15067 1338 aa13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 SOWAHBA6NEL2 793 aa13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 KLRF2D3W0D1 207 aa13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 NFIBO00712 420 aa13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 ZNF865P0CJ78 1059 aaPredicted RBP13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 BAATQ14032 418 aaPredicted RBP13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 CDC37Q16543 378 aaPredicted RBP13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 USH1GQ495M9 461 aa13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 MAMDC4Q6UXC1 1216 aa13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 CATIPQ7Z7H3 387 aa13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 ZNF467Q7Z7K2 595 aaPredicted RBP13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 RASEFQ8IZ41 740 aa13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 MSL3Q8N5Y2 521 aaKnown RBP13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 FAM133AQ8N9E0 248 aa13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 CLEC4DQ8WXI8 215 aa13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 PURBQ96QR8 312 aaKnown RBP13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 C11orf49Q9H6J7 331 aa13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 JMJD4Q9H9V9 463 aa13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 CYP39A1Q9NYL5 469 aa13.96□□□□□ -0.17
AC007540.1-201ENST00000548473 NRBP1Q9UHY1 535 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms