RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 TRIM43BA6NCK2 446 aa19■□□□□ 0.63
RAPGEF3-217ENST00000548434 KBTBD13C9JR72 458 aa19■□□□□ 0.63
RAPGEF3-217ENST00000548434 RARBP10826 455 aa19■□□□□ 0.63
RAPGEF3-217ENST00000548434 AKR1A1P14550 325 aa19■□□□□ 0.63
RAPGEF3-217ENST00000548434 STAT2P52630 851 aa19■□□□□ 0.63
RAPGEF3-217ENST00000548434 CNTN2Q02246 1040 aa19■□□□□ 0.63
RAPGEF3-217ENST00000548434 TRIM60Q495X7 471 aa19■□□□□ 0.63
RAPGEF3-217ENST00000548434 KCTD1Q719H9 257 aa19■□□□□ 0.63
RAPGEF3-217ENST00000548434 SH3RF1Q7Z6J0 888 aa19■□□□□ 0.63
RAPGEF3-217ENST00000548434 CHURC1Q8WUH1 139 aa19■□□□□ 0.63
RAPGEF3-217ENST00000548434 FERMT2Q96AC1 680 aa19■□□□□ 0.63
RAPGEF3-217ENST00000548434 TRIM43Q96BQ3 446 aaPredicted RBP19■□□□□ 0.63
RAPGEF3-217ENST00000548434 PDLIM7Q9NR12 457 aa19■□□□□ 0.63
RAPGEF3-217ENST00000548434 PRR12Q9ULL5 1215 aa19■□□□□ 0.63
RAPGEF3-217ENST00000548434 EYSQ5T1H1 3165 aa19■□□□□ 0.63
RAPGEF3-217ENST00000548434 SOWAHBA6NEL2 793 aa18.99■□□□□ 0.63
RAPGEF3-217ENST00000548434 TSPY2A6NKD2 308 aa18.99■□□□□ 0.63
RAPGEF3-217ENST00000548434 SDSP20132 328 aa18.99■□□□□ 0.63
RAPGEF3-217ENST00000548434 ITGB8P26012 769 aa18.99■□□□□ 0.63
RAPGEF3-217ENST00000548434 SLC1A4P43007 532 aa18.99■□□□□ 0.63
RAPGEF3-217ENST00000548434 DDX11Q96FC9 970 aa18.99■□□□□ 0.63
RAPGEF3-217ENST00000548434 TSEN34Q9BSV6 310 aaKnown RBP18.99■□□□□ 0.63
RAPGEF3-217ENST00000548434 UPF3AQ9H1J1 476 aaKnown RBP18.99■□□□□ 0.63
RAPGEF3-217ENST00000548434 RWDD1Q9H446 243 aaPredicted RBP18.99■□□□□ 0.63
RAPGEF3-217ENST00000548434 A1CFQ9NQ94 594 aaKnown RBP18.99■□□□□ 0.63
RAPGEF3-217ENST00000548434 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.99■□□□□ 0.63
RAPGEF3-217ENST00000548434 FBXO40Q9UH90 709 aa18.99■□□□□ 0.63
RAPGEF3-217ENST00000548434 CCDC171Q6TFL3 1326 aa18.99■□□□□ 0.63
RAPGEF3-217ENST00000548434 SYNRGQ9UMZ2 1314 aa18.99■□□□□ 0.63
RAPGEF3-217ENST00000548434 A0A1W2PQ45 241 aaPredicted RBP18.98■□□□□ 0.63
RAPGEF3-217ENST00000548434 A0A1W2PQY0 241 aa18.98■□□□□ 0.63
RAPGEF3-217ENST00000548434 MYADML2A6NDP7 307 aa18.98■□□□□ 0.63
RAPGEF3-217ENST00000548434 DUSP11O75319 330 aaKnown RBP18.98■□□□□ 0.63
RAPGEF3-217ENST00000548434 CST5P28325 142 aaPredicted RBP18.98■□□□□ 0.63
RAPGEF3-217ENST00000548434 ACVR2BQ13705 512 aa18.98■□□□□ 0.63
RAPGEF3-217ENST00000548434 TTBK2Q6IQ55 1244 aa18.98■□□□□ 0.63
RAPGEF3-217ENST00000548434 TMEM47Q9BQJ4 181 aa18.98■□□□□ 0.63
RAPGEF3-217ENST00000548434 STX8Q9UNK0 236 aa18.98■□□□□ 0.63
RAPGEF3-217ENST00000548434 CDH23Q9H251 3354 aa18.98■□□□□ 0.63
RAPGEF3-217ENST00000548434 POTEB2H3BUK9 544 aa18.97■□□□□ 0.63
RAPGEF3-217ENST00000548434 RANBP6O60518 1105 aaKnown RBP18.97■□□□□ 0.63
RAPGEF3-217ENST00000548434 SNHG28P0DPA3 235 aa18.97■□□□□ 0.63
RAPGEF3-217ENST00000548434 SNAP25P60880 206 aa18.97■□□□□ 0.63
RAPGEF3-217ENST00000548434 TLE2Q04725 743 aa18.97■□□□□ 0.63
RAPGEF3-217ENST00000548434 TKFCQ3LXA3 575 aa18.97■□□□□ 0.63
RAPGEF3-217ENST00000548434 MUM1L1Q5H9M0 696 aa18.97■□□□□ 0.63
RAPGEF3-217ENST00000548434 PPP4R3BQ5MIZ7 849 aa18.97■□□□□ 0.63
RAPGEF3-217ENST00000548434 B4GALNT3Q6L9W6 998 aa18.97■□□□□ 0.63
RAPGEF3-217ENST00000548434 ARMCX2Q7L311 632 aa18.97■□□□□ 0.63
RAPGEF3-217ENST00000548434 TBC1D10CQ8IV04 446 aa18.97■□□□□ 0.63
RAPGEF3-217ENST00000548434 CCDC144CPQ8IYA2 1237 aa18.97■□□□□ 0.63
RAPGEF3-217ENST00000548434 DCAF4Q8WV16 495 aa18.97■□□□□ 0.63
RAPGEF3-217ENST00000548434 RANBP17Q9H2T7 1088 aaKnown RBP18.97■□□□□ 0.63
RAPGEF3-217ENST00000548434 ABHD16BQ9H3Z7 469 aa18.97■□□□□ 0.63
RAPGEF3-217ENST00000548434 FAM184BQ9ULE4 1060 aa18.97■□□□□ 0.63
RAPGEF3-217ENST00000548434 CNPY2Q9Y2B0 182 aa18.97■□□□□ 0.63
RAPGEF3-217ENST00000548434 ATP11BQ9Y2G3 1177 aa18.97■□□□□ 0.63
RAPGEF3-217ENST00000548434 PRUNE2Q8WUY3 3088 aa18.97■□□□□ 0.63
RAPGEF3-217ENST00000548434 UNC80Q8N2C7 3258 aa18.96■□□□□ 0.63
RAPGEF3-217ENST00000548434 CDK7P50613 346 aa18.96■□□□□ 0.63
RAPGEF3-217ENST00000548434 ACLYP53396 1101 aa18.96■□□□□ 0.63
RAPGEF3-217ENST00000548434 CCDC144BQ3MJ40 725 aa18.96■□□□□ 0.63
RAPGEF3-217ENST00000548434 RNF180Q86T96 592 aa18.96■□□□□ 0.63
RAPGEF3-217ENST00000548434 ANKRD35Q8N283 1001 aa18.96■□□□□ 0.63
RAPGEF3-217ENST00000548434 MORC4Q8TE76 937 aa18.96■□□□□ 0.63
RAPGEF3-217ENST00000548434 CHMP4CQ96CF2 233 aa18.96■□□□□ 0.63
RAPGEF3-217ENST00000548434 YTHDC1Q96MU7 727 aaKnown RBP18.96■□□□□ 0.63
RAPGEF3-217ENST00000548434 ACAD9Q9H845 621 aa18.96■□□□□ 0.63
RAPGEF3-217ENST00000548434 RNF146Q9NTX7 359 aa18.96■□□□□ 0.63
RAPGEF3-217ENST00000548434 GJA9P57773 515 aa18.95■□□□□ 0.62
RAPGEF3-217ENST00000548434 HAND2P61296 217 aa18.95■□□□□ 0.62
RAPGEF3-217ENST00000548434 KCNA10Q16322 511 aa18.95■□□□□ 0.62
RAPGEF3-217ENST00000548434 AKNAD1Q5T1N1 836 aa18.95■□□□□ 0.62
RAPGEF3-217ENST00000548434 ANKRD33Q7Z3H0 272 aa18.95■□□□□ 0.62
RAPGEF3-217ENST00000548434 TRERF1Q96PN7 1200 aa18.95■□□□□ 0.62
RAPGEF3-217ENST00000548434 IL25Q9H293 177 aa18.95■□□□□ 0.62
RAPGEF3-217ENST00000548434 HOMER2Q9NSB8 354 aa18.95■□□□□ 0.62
RAPGEF3-217ENST00000548434 MTMR10Q9NXD2 777 aa18.95■□□□□ 0.62
RAPGEF3-217ENST00000548434 CYP39A1Q9NYL5 469 aa18.95■□□□□ 0.62
RAPGEF3-217ENST00000548434 ZBTB47Q9UFB7 747 aaPredicted RBP18.95■□□□□ 0.62
RAPGEF3-217ENST00000548434 DDX49Q9Y6V7 483 aaKnown RBP18.95■□□□□ 0.62
RAPGEF3-217ENST00000548434 KIAA0355O15063 1070 aa18.94■□□□□ 0.62
RAPGEF3-217ENST00000548434 PDHBP11177 359 aa18.94■□□□□ 0.62
RAPGEF3-217ENST00000548434 TOP1P11387 765 aaKnown RBP18.94■□□□□ 0.62
RAPGEF3-217ENST00000548434 PCP11498 1178 aaKnown RBP18.94■□□□□ 0.62
RAPGEF3-217ENST00000548434 PDE4AP27815 886 aa18.94■□□□□ 0.62
RAPGEF3-217ENST00000548434 SLC4A3P48751 1232 aa18.94■□□□□ 0.62
RAPGEF3-217ENST00000548434 FAAP100Q0VG06 881 aa18.94■□□□□ 0.62
RAPGEF3-217ENST00000548434 Q7L0L9 218 aa18.94■□□□□ 0.62
RAPGEF3-217ENST00000548434 TTC14Q96N46 770 aa18.94■□□□□ 0.62
RAPGEF3-217ENST00000548434 TOX2Q96NM4 488 aa18.94■□□□□ 0.62
RAPGEF3-217ENST00000548434 PURBQ96QR8 312 aaKnown RBP18.94■□□□□ 0.62
RAPGEF3-217ENST00000548434 GNEQ9Y223 722 aaKnown RBP18.94■□□□□ 0.62
RAPGEF3-217ENST00000548434 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.93■□□□□ 0.62
RAPGEF3-217ENST00000548434 TRIM6-TRIM34B2RNG4 842 aa18.93■□□□□ 0.62
RAPGEF3-217ENST00000548434 ICAM1P05362 532 aa18.93■□□□□ 0.62
RAPGEF3-217ENST00000548434 SLC16A2P36021 539 aa18.93■□□□□ 0.62
RAPGEF3-217ENST00000548434 EPHB4P54760 987 aa18.93■□□□□ 0.62
RAPGEF3-217ENST00000548434 SHHQ15465 462 aa18.93■□□□□ 0.62
RAPGEF3-217ENST00000548434 C9orf50Q5SZB4 431 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms