RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 CCDC174Q6PII3 467 aa20.18■□□□□ 0.82
HDAC7-227ENST00000548080 MB21D1Q8N884 522 aa20.18■□□□□ 0.82
HDAC7-227ENST00000548080 CHURC1Q8WUH1 139 aa20.18■□□□□ 0.82
HDAC7-227ENST00000548080 LLPHQ9BRT6 129 aaKnown RBP20.18■□□□□ 0.82
HDAC7-227ENST00000548080 UBA5Q9GZZ9 404 aa20.18■□□□□ 0.82
HDAC7-227ENST00000548080 RAVER2Q9HCJ3 691 aaKnown RBP20.18■□□□□ 0.82
HDAC7-227ENST00000548080 SRRDQ9UH36 339 aa20.18■□□□□ 0.82
HDAC7-227ENST00000548080 PRR12Q9ULL5 1215 aa20.18■□□□□ 0.82
HDAC7-227ENST00000548080 HPS5Q9UPZ3 1129 aa20.18■□□□□ 0.82
HDAC7-227ENST00000548080 PTPN22Q9Y2R2 807 aa20.18■□□□□ 0.82
HDAC7-227ENST00000548080 CTDP1Q9Y5B0 961 aaPredicted RBP20.18■□□□□ 0.82
HDAC7-227ENST00000548080 HTTP42858 3142 aa20.18■□□□□ 0.82
HDAC7-227ENST00000548080 NUCB2P80303 420 aa20.18■□□□□ 0.82
HDAC7-227ENST00000548080 APOA5Q6Q788 366 aa20.18■□□□□ 0.82
HDAC7-227ENST00000548080 SYNE3Q6ZMZ3 975 aa20.18■□□□□ 0.82
HDAC7-227ENST00000548080 GPR142Q7Z601 462 aa20.18■□□□□ 0.82
HDAC7-227ENST00000548080 FAM160B2Q86V87 743 aa20.18■□□□□ 0.82
HDAC7-227ENST00000548080 NCAPG2Q86XI2 1143 aa20.18■□□□□ 0.82
HDAC7-227ENST00000548080 STAG2Q8N3U4 1231 aa20.18■□□□□ 0.82
HDAC7-227ENST00000548080 ZNF214Q9UL59 606 aaPredicted RBP20.18■□□□□ 0.82
HDAC7-227ENST00000548080 SLC12A7Q9Y666 1083 aa20.18■□□□□ 0.82
HDAC7-227ENST00000548080 ZBTB43O43298 467 aa20.17■□□□□ 0.82
HDAC7-227ENST00000548080 DHX16O60231 1041 aaKnown RBP20.17■□□□□ 0.82
HDAC7-227ENST00000548080 ZBED4O75132 1171 aa20.17■□□□□ 0.82
HDAC7-227ENST00000548080 ERCC3P19447 782 aa20.17■□□□□ 0.82
HDAC7-227ENST00000548080 GJB2P29033 226 aa20.17■□□□□ 0.82
HDAC7-227ENST00000548080 CCNA1P78396 465 aa20.17■□□□□ 0.82
HDAC7-227ENST00000548080 ARHGEF6Q15052 776 aa20.17■□□□□ 0.82
HDAC7-227ENST00000548080 SYDE2Q5VT97 1194 aa20.17■□□□□ 0.82
HDAC7-227ENST00000548080 SNRNP48Q6IEG0 339 aaKnown RBP20.17■□□□□ 0.82
HDAC7-227ENST00000548080 COA7Q96BR5 231 aa20.17■□□□□ 0.82
HDAC7-227ENST00000548080 SLC38A10Q9HBR0 1119 aa20.17■□□□□ 0.82
HDAC7-227ENST00000548080 NCOA5Q9HCD5 579 aaKnown RBP20.17■□□□□ 0.82
HDAC7-227ENST00000548080 SMCHD1A6NHR9 2005 aa20.16■□□□□ 0.82
HDAC7-227ENST00000548080 RXRAP19793 462 aa20.16■□□□□ 0.82
HDAC7-227ENST00000548080 MAPK4P31152 587 aa20.16■□□□□ 0.82
HDAC7-227ENST00000548080 STAT3P40763 770 aa20.16■□□□□ 0.82
HDAC7-227ENST00000548080 FLT3LGP49771 235 aa20.16■□□□□ 0.82
HDAC7-227ENST00000548080 FBXO46Q6PJ61 603 aaPredicted RBP20.16■□□□□ 0.82
HDAC7-227ENST00000548080 PLEKHH3Q7Z736 793 aa20.16■□□□□ 0.82
HDAC7-227ENST00000548080 NUP133Q8WUM0 1156 aa20.16■□□□□ 0.82
HDAC7-227ENST00000548080 PARP1P09874 1014 aaKnown RBP20.15■□□□□ 0.82
HDAC7-227ENST00000548080 METAP2P50579 478 aaKnown RBP eCLIP20.15■□□□□ 0.82
HDAC7-227ENST00000548080 RCAN1P53805 252 aa20.15■□□□□ 0.82
HDAC7-227ENST00000548080 ZNF654Q8IZM8 581 aa20.15■□□□□ 0.82
HDAC7-227ENST00000548080 AGBL1Q96MI9 1066 aa20.15■□□□□ 0.82
HDAC7-227ENST00000548080 RIPK3Q9Y572 518 aa20.15■□□□□ 0.82
HDAC7-227ENST00000548080 PLA2G6O60733 806 aa20.14■□□□□ 0.81
HDAC7-227ENST00000548080 HOXD10P28358 340 aa20.14■□□□□ 0.81
HDAC7-227ENST00000548080 GPATCH4Q5T3I0 446 aaKnown RBP20.14■□□□□ 0.81
HDAC7-227ENST00000548080 BTNL9Q6UXG8 535 aa20.14■□□□□ 0.81
HDAC7-227ENST00000548080 CATIPQ7Z7H3 387 aa20.14■□□□□ 0.81
HDAC7-227ENST00000548080 CCDC144CPQ8IYA2 1237 aa20.14■□□□□ 0.81
HDAC7-227ENST00000548080 NSUN7Q8NE18 718 aaKnown RBP20.14■□□□□ 0.81
HDAC7-227ENST00000548080 SMARCC2Q8TAQ2 1214 aa20.14■□□□□ 0.81
HDAC7-227ENST00000548080 RAET1EQ8TD07 263 aa20.14■□□□□ 0.81
HDAC7-227ENST00000548080 SH3TC2Q8TF17 1288 aa20.14■□□□□ 0.81
HDAC7-227ENST00000548080 HOMER2Q9NSB8 354 aa20.14■□□□□ 0.81
HDAC7-227ENST00000548080 MAD2L2Q9UI95 211 aa20.14■□□□□ 0.81
HDAC7-227ENST00000548080 BAZ2BQ9UIF8 2168 aaKnown RBP20.14■□□□□ 0.81
HDAC7-227ENST00000548080 GOLGA8AA7E2F4 631 aa20.13■□□□□ 0.81
HDAC7-227ENST00000548080 CTDNEP1O95476 244 aa20.13■□□□□ 0.81
HDAC7-227ENST00000548080 ELNP15502 786 aa20.13■□□□□ 0.81
HDAC7-227ENST00000548080 CYP2B6P20813 491 aa20.13■□□□□ 0.81
HDAC7-227ENST00000548080 TROAPQ12815 778 aa20.13■□□□□ 0.81
HDAC7-227ENST00000548080 ASPRV1Q53RT3 343 aa20.13■□□□□ 0.81
HDAC7-227ENST00000548080 MICU3Q86XE3 530 aa20.13■□□□□ 0.81
HDAC7-227ENST00000548080 RIOX2Q8IUF8 465 aa20.13■□□□□ 0.81
HDAC7-227ENST00000548080 TEX13BQ9BXU2 312 aa20.13■□□□□ 0.81
HDAC7-227ENST00000548080 VAT1LQ9HCJ6 419 aa20.13■□□□□ 0.81
HDAC7-227ENST00000548080 GJD2Q9UKL4 321 aa20.13■□□□□ 0.81
HDAC7-227ENST00000548080 ZNF536O15090 1300 aa20.13■□□□□ 0.81
HDAC7-227ENST00000548080 CPLX1O14810 134 aa20.12■□□□□ 0.81
HDAC7-227ENST00000548080 JAK2O60674 1132 aa20.12■□□□□ 0.81
HDAC7-227ENST00000548080 DTNBO60941 627 aa20.12■□□□□ 0.81
HDAC7-227ENST00000548080 MYCP01106 439 aaPredicted RBP20.12■□□□□ 0.81
HDAC7-227ENST00000548080 GNRH1P01148 92 aa20.12■□□□□ 0.81
HDAC7-227ENST00000548080 HMGN5P82970 282 aaKnown RBP20.12■□□□□ 0.81
HDAC7-227ENST00000548080 GRM4Q14833 912 aa20.12■□□□□ 0.81
HDAC7-227ENST00000548080 PKN2Q16513 984 aaKnown RBP20.12■□□□□ 0.81
HDAC7-227ENST00000548080 ADGRF4Q8IZF3 695 aa20.12■□□□□ 0.81
HDAC7-227ENST00000548080 ABHD8Q96I13 439 aa20.12■□□□□ 0.81
HDAC7-227ENST00000548080 NID2Q14112 1375 aa20.12■□□□□ 0.81
HDAC7-227ENST00000548080 ZNFX1Q9P2E3 1918 aaKnown RBP20.12■□□□□ 0.81
HDAC7-227ENST00000548080 CENPFP49454 3210 aa20.11■□□□□ 0.81
HDAC7-227ENST00000548080 KLRF2D3W0D1 207 aa20.11■□□□□ 0.81
HDAC7-227ENST00000548080 PDCP20941 246 aa20.11■□□□□ 0.81
HDAC7-227ENST00000548080 PTPREP23469 700 aa20.11■□□□□ 0.81
HDAC7-227ENST00000548080 SLC35G1Q2M3R5 365 aa20.11■□□□□ 0.81
HDAC7-227ENST00000548080 CPLX2Q6PUV4 134 aaKnown RBP20.11■□□□□ 0.81
HDAC7-227ENST00000548080 SHCBP1Q8NEM2 672 aa20.11■□□□□ 0.81
HDAC7-227ENST00000548080 RANBP17Q9H2T7 1088 aaKnown RBP20.11■□□□□ 0.81
HDAC7-227ENST00000548080 IVNS1ABPQ9Y6Y0 642 aa20.11■□□□□ 0.81
HDAC7-227ENST00000548080 MYH6P13533 1939 aa20.11■□□□□ 0.81
HDAC7-227ENST00000548080 PTPDC1A2A3K4 754 aa20.11■□□□□ 0.81
HDAC7-227ENST00000548080 ADCY3O60266 1144 aa20.11■□□□□ 0.81
HDAC7-227ENST00000548080 SLC25A27O95847 323 aa20.11■□□□□ 0.81
HDAC7-227ENST00000548080 CALM1P0DP23 149 aa20.11■□□□□ 0.81
HDAC7-227ENST00000548080 CALM2P0DP24 149 aa20.11■□□□□ 0.81
HDAC7-227ENST00000548080 CALM3P0DP25 149 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms