RNA–Protein interactions for RNA: ENST00000547905.5

RACGAP1-209, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-209ENST00000547905 VAMP4O75379 141 aa11.18□□□□□ -0.62
RACGAP1-209ENST00000547905 C6orf222P0C671 652 aaPredicted RBP11.18□□□□□ -0.62
RACGAP1-209ENST00000547905 ITGA7Q13683 1181 aa11.18□□□□□ -0.62
RACGAP1-209ENST00000547905 RASGRF1Q13972 1273 aa11.18□□□□□ -0.62
RACGAP1-209ENST00000547905 GNASQ5JWF2 1037 aa11.18□□□□□ -0.62
RACGAP1-209ENST00000547905 COL26A1Q96A83 441 aa11.18□□□□□ -0.62
RACGAP1-209ENST00000547905 VWCEQ96DN2 955 aa11.18□□□□□ -0.62
RACGAP1-209ENST00000547905 ALG13Q9NP73 1137 aaKnown RBP11.18□□□□□ -0.62
RACGAP1-209ENST00000547905 AKAP2Q9Y2D5 859 aa11.18□□□□□ -0.62
RACGAP1-209ENST00000547905 KMT2EQ8IZD2 1858 aa11.17□□□□□ -0.62
RACGAP1-209ENST00000547905 F6X3S4 739 aa11.17□□□□□ -0.62
RACGAP1-209ENST00000547905 GDF11O95390 407 aa11.17□□□□□ -0.62
RACGAP1-209ENST00000547905 IRS1P35568 1242 aa11.17□□□□□ -0.62
RACGAP1-209ENST00000547905 TTLL4Q14679 1199 aa11.17□□□□□ -0.62
RACGAP1-209ENST00000547905 KRT40Q6A162 431 aa11.17□□□□□ -0.62
RACGAP1-209ENST00000547905 ITPRIPQ8IWB1 547 aa11.17□□□□□ -0.62
RACGAP1-209ENST00000547905 MRPL50Q8N5N7 158 aaKnown RBP11.17□□□□□ -0.62
RACGAP1-209ENST00000547905 TRPC6Q9Y210 931 aa11.17□□□□□ -0.62
RACGAP1-209ENST00000547905 FLT1P17948 1338 aa11.17□□□□□ -0.62
RACGAP1-209ENST00000547905 FOCADQ5VW36 1801 aa11.17□□□□□ -0.62
RACGAP1-209ENST00000547905 TAL1P17542 331 aaPredicted RBP11.17□□□□□ -0.62
RACGAP1-209ENST00000547905 KCNJ6P48051 423 aa11.17□□□□□ -0.62
RACGAP1-209ENST00000547905 ZXDAP98168 799 aa11.17□□□□□ -0.62
RACGAP1-209ENST00000547905 PTPN11Q06124 597 aaPredicted RBP11.17□□□□□ -0.62
RACGAP1-209ENST00000547905 ACVR2BQ13705 512 aa11.17□□□□□ -0.62
RACGAP1-209ENST00000547905 ABCB5Q2M3G0 1257 aa11.17□□□□□ -0.62
RACGAP1-209ENST00000547905 SMCHD1A6NHR9 2005 aa11.17□□□□□ -0.62
RACGAP1-209ENST00000547905 GALR2O43603 387 aaPredicted RBP11.16□□□□□ -0.62
RACGAP1-209ENST00000547905 NBPF7P0C2Y1 421 aaPredicted RBP11.16□□□□□ -0.62
RACGAP1-209ENST00000547905 PLXNA3P51805 1871 aa11.16□□□□□ -0.62
RACGAP1-209ENST00000547905 CCL23P55773 120 aa11.16□□□□□ -0.62
RACGAP1-209ENST00000547905 TTC6Q86TZ1 520 aa11.16□□□□□ -0.62
RACGAP1-209ENST00000547905 RNF135Q8IUD6 432 aa11.16□□□□□ -0.62
RACGAP1-209ENST00000547905 RAD9AQ99638 391 aa11.16□□□□□ -0.62
RACGAP1-209ENST00000547905 FSD1Q9BTV5 496 aa11.16□□□□□ -0.62
RACGAP1-209ENST00000547905 SNAI1O95863 264 aaPredicted RBP11.16□□□□□ -0.62
RACGAP1-209ENST00000547905 NUCB1Q02818 461 aa11.16□□□□□ -0.62
RACGAP1-209ENST00000547905 SIGLEC14Q08ET2 396 aa11.16□□□□□ -0.62
RACGAP1-209ENST00000547905 BECN1Q14457 450 aa11.16□□□□□ -0.62
RACGAP1-209ENST00000547905 CERKLQ49MI3 558 aaPredicted RBP11.16□□□□□ -0.62
RACGAP1-209ENST00000547905 IER5LQ5T953 404 aa11.16□□□□□ -0.62
RACGAP1-209ENST00000547905 RETREG2Q8NC44 543 aa11.16□□□□□ -0.62
RACGAP1-209ENST00000547905 SH3RF3Q8TEJ3 882 aaPredicted RBP11.16□□□□□ -0.62
RACGAP1-209ENST00000547905 ZNF384Q8TF68 577 aa11.16□□□□□ -0.62
RACGAP1-209ENST00000547905 SEMA4AQ9H3S1 761 aa11.16□□□□□ -0.62
RACGAP1-209ENST00000547905 CERS4Q9HA82 394 aa11.16□□□□□ -0.62
RACGAP1-209ENST00000547905 SUGCTQ9HAC7 445 aa11.16□□□□□ -0.62
RACGAP1-209ENST00000547905 ZNFX1Q9P2E3 1918 aaKnown RBP11.15□□□□□ -0.62
RACGAP1-209ENST00000547905 DNAJC25-GNG10A0A024R161 153 aa11.15□□□□□ -0.62
RACGAP1-209ENST00000547905 CTAGE5O15320 804 aa11.15□□□□□ -0.62
RACGAP1-209ENST00000547905 AVPR2P30518 371 aa11.15□□□□□ -0.62
RACGAP1-209ENST00000547905 SMAD4Q13485 552 aaKnown RBP11.15□□□□□ -0.62
RACGAP1-209ENST00000547905 LMAN2LQ9H0V9 348 aa11.15□□□□□ -0.62
RACGAP1-209ENST00000547905 ANTXR1Q9H6X2 564 aa11.15□□□□□ -0.62
RACGAP1-209ENST00000547905 MUC3AQ02505 3323 aa11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 MYADML2A6NDP7 307 aa11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 WDR46O15213 610 aaKnown RBP11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 BFSP2Q13515 415 aa11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 CBX2Q14781 532 aaPredicted RBP11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 CCDC155Q8N6L0 562 aa11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 UPF2Q9HAU5 1272 aaKnown RBP11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 SERPINB13Q9UIV8 391 aa11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 LAMA2P24043 3122 aaKnown RBP11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 B4GALT4O60513 344 aa11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 KRT37O76014 449 aa11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 UQCRFS1P1P0C7P4 283 aa11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 PUM1Q14671 1186 aaKnown RBP eCLIP11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 DGLUCYQ7Z3D6 616 aa11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 GDPD5Q8WTR4 605 aa11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 CHMP4BQ9H444 224 aaKnown RBP11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 NSUN3Q9H649 340 aaKnown RBP11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 POLR3EQ9NVU0 708 aa11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 ZHX1Q9UKY1 873 aaPredicted RBP11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 COL4A6Q14031 1691 aa11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 UMODL1Q5DID0 1318 aa11.14□□□□□ -0.63
RACGAP1-209ENST00000547905 STAT3P40763 770 aa11.13□□□□□ -0.63
RACGAP1-209ENST00000547905 PLS1Q14651 629 aa11.13□□□□□ -0.63
RACGAP1-209ENST00000547905 ZYXQ15942 572 aaKnown RBP11.13□□□□□ -0.63
RACGAP1-209ENST00000547905 ASCL5Q7RTU5 278 aa11.13□□□□□ -0.63
RACGAP1-209ENST00000547905 ACER1Q8TDN7 264 aa11.13□□□□□ -0.63
RACGAP1-209ENST00000547905 NKD2Q969F2 451 aaPredicted RBP11.13□□□□□ -0.63
RACGAP1-209ENST00000547905 AP5M1Q9H0R1 490 aa11.13□□□□□ -0.63
RACGAP1-209ENST00000547905 ALDH8A1Q9H2A2 487 aaPredicted RBP11.13□□□□□ -0.63
RACGAP1-209ENST00000547905 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.13□□□□□ -0.63
RACGAP1-209ENST00000547905 RAI14Q9P0K7 980 aa11.13□□□□□ -0.63
RACGAP1-209ENST00000547905 MUTYHQ9UIF7 546 aa11.13□□□□□ -0.63
RACGAP1-209ENST00000547905 ZDBF2Q9HCK1 2354 aa11.13□□□□□ -0.63
RACGAP1-209ENST00000547905 SIP14410 1827 aa11.13□□□□□ -0.63
RACGAP1-209ENST00000547905 ABHD14A-ACY1A0A1B0GW23 586 aa11.13□□□□□ -0.63
RACGAP1-209ENST00000547905 MCAMP43121 646 aa11.13□□□□□ -0.63
RACGAP1-209ENST00000547905 RAB3GAP1Q15042 981 aa11.13□□□□□ -0.63
RACGAP1-209ENST00000547905 SPATA5Q8NB90 893 aa11.13□□□□□ -0.63
RACGAP1-209ENST00000547905 FBXO22Q8NEZ5 403 aa11.13□□□□□ -0.63
RACGAP1-209ENST00000547905 TGFBRAP1Q8WUH2 860 aa11.13□□□□□ -0.63
RACGAP1-209ENST00000547905 FBXO40Q9UH90 709 aa11.13□□□□□ -0.63
RACGAP1-209ENST00000547905 ATP2A1O14983 1001 aa11.12□□□□□ -0.63
RACGAP1-209ENST00000547905 KPNA6O60684 536 aa11.12□□□□□ -0.63
RACGAP1-209ENST00000547905 FLOT1O75955 427 aa11.12□□□□□ -0.63
RACGAP1-209ENST00000547905 SDHBP21912 280 aa11.12□□□□□ -0.63
RACGAP1-209ENST00000547905 ARID4AP29374 1257 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms