RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 KLHDC9Q8NEP7 349 aa27.39■■□□□ 1.98
SMARCD1-204ENST00000547637 RNPC3Q96LT9 517 aaKnown RBP27.39■■□□□ 1.98
SMARCD1-204ENST00000547637 ACAD9Q9H845 621 aa27.39■■□□□ 1.98
SMARCD1-204ENST00000547637 ELP1O95163 1332 aa27.39■■□□□ 1.97
SMARCD1-204ENST00000547637 COL6A3P12111 3177 aa27.38■■□□□ 1.97
SMARCD1-204ENST00000547637 PLIN4Q96Q06 1357 aa27.38■■□□□ 1.97
SMARCD1-204ENST00000547637 CCDC174Q6PII3 467 aa27.38■■□□□ 1.97
SMARCD1-204ENST00000547637 STAG1Q8WVM7 1258 aa27.38■■□□□ 1.97
SMARCD1-204ENST00000547637 SEMA6BQ9H3T3 888 aa27.38■■□□□ 1.97
SMARCD1-204ENST00000547637 TSPY2A6NKD2 308 aa27.37■■□□□ 1.97
SMARCD1-204ENST00000547637 MX1P20591 662 aa27.37■■□□□ 1.97
SMARCD1-204ENST00000547637 CST5P28325 142 aaPredicted RBP27.37■■□□□ 1.97
SMARCD1-204ENST00000547637 TKFCQ3LXA3 575 aa27.37■■□□□ 1.97
SMARCD1-204ENST00000547637 ZMYM1Q5SVZ6 1142 aa27.37■■□□□ 1.97
SMARCD1-204ENST00000547637 ARMCX2Q7L311 632 aa27.37■■□□□ 1.97
SMARCD1-204ENST00000547637 LENG1Q96BZ8 264 aaPredicted RBP27.37■■□□□ 1.97
SMARCD1-204ENST00000547637 HOMER2Q9NSB8 354 aa27.37■■□□□ 1.97
SMARCD1-204ENST00000547637 ASB14A6NK59 587 aa27.36■■□□□ 1.97
SMARCD1-204ENST00000547637 CCDC144BQ3MJ40 725 aa27.36■■□□□ 1.97
SMARCD1-204ENST00000547637 PI4K2BQ8TCG2 481 aa27.36■■□□□ 1.97
SMARCD1-204ENST00000547637 GMCL1Q96IK5 515 aa27.36■■□□□ 1.97
SMARCD1-204ENST00000547637 SEC62Q99442 399 aaKnown RBP27.36■■□□□ 1.97
SMARCD1-204ENST00000547637 STX8Q9UNK0 236 aa27.36■■□□□ 1.97
SMARCD1-204ENST00000547637 FAAP100Q0VG06 881 aa27.35■■□□□ 1.97
SMARCD1-204ENST00000547637 GNASQ5JWF2 1037 aa27.35■■□□□ 1.97
SMARCD1-204ENST00000547637 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.35■■□□□ 1.97
SMARCD1-204ENST00000547637 CDX2Q99626 313 aaPredicted RBP27.35■■□□□ 1.97
SMARCD1-204ENST00000547637 TMEM265A0A087WTH1 108 aa27.34■■□□□ 1.97
SMARCD1-204ENST00000547637 TLR3O15455 904 aaKnown RBP27.34■■□□□ 1.97
SMARCD1-204ENST00000547637 ASGR1P07306 291 aa27.34■■□□□ 1.97
SMARCD1-204ENST00000547637 MCCP23508 829 aa27.34■■□□□ 1.97
SMARCD1-204ENST00000547637 GJA9P57773 515 aa27.34■■□□□ 1.97
SMARCD1-204ENST00000547637 NOL8Q76FK4 1167 aaKnown RBP27.34■■□□□ 1.97
SMARCD1-204ENST00000547637 A0A0U1RQG5 324 aaPredicted RBP27.33■■□□□ 1.97
SMARCD1-204ENST00000547637 PLA2G6O60733 806 aa27.33■■□□□ 1.97
SMARCD1-204ENST00000547637 TIMP1P01033 207 aa27.33■■□□□ 1.97
SMARCD1-204ENST00000547637 ITGB8P26012 769 aa27.33■■□□□ 1.97
SMARCD1-204ENST00000547637 CCSAPQ6IQ19 270 aaPredicted RBP27.33■■□□□ 1.97
SMARCD1-204ENST00000547637 RCSD1Q6JBY9 416 aa27.33■■□□□ 1.97
SMARCD1-204ENST00000547637 CCDC144CPQ8IYA2 1237 aa27.33■■□□□ 1.97
SMARCD1-204ENST00000547637 RNF146Q9NTX7 359 aa27.33■■□□□ 1.97
SMARCD1-204ENST00000547637 PCDHB15Q9Y5E8 787 aa27.33■■□□□ 1.97
SMARCD1-204ENST00000547637 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.32■■□□□ 1.96
SMARCD1-204ENST00000547637 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.32■■□□□ 1.96
SMARCD1-204ENST00000547637 TRERF1Q96PN7 1200 aa27.32■■□□□ 1.96
SMARCD1-204ENST00000547637 UPF3AQ9H1J1 476 aaKnown RBP27.32■■□□□ 1.96
SMARCD1-204ENST00000547637 ALAS1P13196 640 aa27.31■■□□□ 1.96
SMARCD1-204ENST00000547637 TNFAIP2Q03169 654 aa27.31■■□□□ 1.96
SMARCD1-204ENST00000547637 PPIGQ13427 754 aaKnown RBP eCLIP27.31■■□□□ 1.96
SMARCD1-204ENST00000547637 EVI5LQ96CN4 794 aa27.31■■□□□ 1.96
SMARCD1-204ENST00000547637 MCM3APO60318 1980 aa27.3■■□□□ 1.96
SMARCD1-204ENST00000547637 ARVCFO00192 962 aa27.3■■□□□ 1.96
SMARCD1-204ENST00000547637 ZEB2O60315 1214 aa27.3■■□□□ 1.96
SMARCD1-204ENST00000547637 RANBP6O60518 1105 aaKnown RBP27.3■■□□□ 1.96
SMARCD1-204ENST00000547637 TMEM199Q8N511 208 aa27.3■■□□□ 1.96
SMARCD1-204ENST00000547637 FAM133AQ8N9E0 248 aa27.3■■□□□ 1.96
SMARCD1-204ENST00000547637 AGBL1Q96MI9 1066 aa27.3■■□□□ 1.96
SMARCD1-204ENST00000547637 AP5M1Q9H0R1 490 aa27.3■■□□□ 1.96
SMARCD1-204ENST00000547637 MYADML2A6NDP7 307 aa27.29■■□□□ 1.96
SMARCD1-204ENST00000547637 CABYRO75952 493 aa27.29■■□□□ 1.96
SMARCD1-204ENST00000547637 CNTN2Q02246 1040 aa27.29■■□□□ 1.96
SMARCD1-204ENST00000547637 ANKRD45Q5TZF3 282 aa27.29■■□□□ 1.96
SMARCD1-204ENST00000547637 MFSD5Q6N075 450 aa27.29■■□□□ 1.96
SMARCD1-204ENST00000547637 CCDC129Q6ZRS4 1044 aa27.29■■□□□ 1.96
SMARCD1-204ENST00000547637 MAFAQ8NHW3 353 aaPredicted RBP27.29■■□□□ 1.96
SMARCD1-204ENST00000547637 SEZ6LQ9BYH1 1024 aa27.29■■□□□ 1.96
SMARCD1-204ENST00000547637 A1CFQ9NQ94 594 aaKnown RBP27.29■■□□□ 1.96
SMARCD1-204ENST00000547637 CDK7P50613 346 aa27.28■■□□□ 1.96
SMARCD1-204ENST00000547637 CTDSPL2Q05D32 466 aa27.28■■□□□ 1.96
SMARCD1-204ENST00000547637 KCTD1Q719H9 257 aa27.28■■□□□ 1.96
SMARCD1-204ENST00000547637 OTUD7AQ8TE49 926 aaPredicted RBP27.28■■□□□ 1.96
SMARCD1-204ENST00000547637 CHMP4CQ96CF2 233 aa27.28■■□□□ 1.96
SMARCD1-204ENST00000547637 FGD4Q96M96 766 aa27.28■■□□□ 1.96
SMARCD1-204ENST00000547637 HELLSQ9NRZ9 838 aa27.28■■□□□ 1.96
SMARCD1-204ENST00000547637 TOMM22Q9NS69 142 aa27.28■■□□□ 1.96
SMARCD1-204ENST00000547637 FOSL2P15408 326 aa27.27■■□□□ 1.96
SMARCD1-204ENST00000547637 EPHB4P54760 987 aa27.27■■□□□ 1.96
SMARCD1-204ENST00000547637 ANAPC4Q9UJX5 808 aa27.27■■□□□ 1.96
SMARCD1-204ENST00000547637 TBX21Q9UL17 535 aa27.27■■□□□ 1.96
SMARCD1-204ENST00000547637 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.27■■□□□ 1.96
SMARCD1-204ENST00000547637 ZNF536O15090 1300 aa27.26■■□□□ 1.95
SMARCD1-204ENST00000547637 NKX3-2P78367 333 aa27.26■■□□□ 1.95
SMARCD1-204ENST00000547637 CCDC96Q2M329 555 aa27.26■■□□□ 1.95
SMARCD1-204ENST00000547637 TICAM2Q86XR7 235 aa27.26■■□□□ 1.95
SMARCD1-204ENST00000547637 DCAF4Q8WV16 495 aa27.26■■□□□ 1.95
SMARCD1-204ENST00000547637 TTYH1Q9H313 450 aaPredicted RBP27.26■■□□□ 1.95
SMARCD1-204ENST00000547637 CCPG1Q9ULG6 757 aa27.26■■□□□ 1.95
SMARCD1-204ENST00000547637 PRR12Q9ULL5 1215 aa27.26■■□□□ 1.95
SMARCD1-204ENST00000547637 MTMR7Q9Y216 660 aa27.26■■□□□ 1.95
SMARCD1-204ENST00000547637 IQSEC1Q6DN90 963 aa27.25■■□□□ 1.95
SMARCD1-204ENST00000547637 MYLIPQ8WY64 445 aa27.25■■□□□ 1.95
SMARCD1-204ENST00000547637 IL17RBQ9NRM6 502 aa27.25■■□□□ 1.95
SMARCD1-204ENST00000547637 ADCY6O43306 1168 aa27.24■■□□□ 1.95
SMARCD1-204ENST00000547637 ORC4O43929 436 aa27.24■■□□□ 1.95
SMARCD1-204ENST00000547637 ALX1Q15699 326 aa27.24■■□□□ 1.95
SMARCD1-204ENST00000547637 NSMFQ6X4W1 530 aa27.24■■□□□ 1.95
SMARCD1-204ENST00000547637 TLK2Q86UE8 772 aa27.24■■□□□ 1.95
SMARCD1-204ENST00000547637 KATNBL1Q9H079 304 aa27.24■■□□□ 1.95
SMARCD1-204ENST00000547637 MTIF3Q9H2K0 278 aaKnown RBP27.24■■□□□ 1.95
SMARCD1-204ENST00000547637 CYP39A1Q9NYL5 469 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms