RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 UNC93B1Q9H1C4 597 aa12.81□□□□□ -0.36
GCN1-202ENST00000547263 LY9Q9HBG7 655 aa12.81□□□□□ -0.36
GCN1-202ENST00000547263 FBXO40Q9UH90 709 aa12.81□□□□□ -0.36
GCN1-202ENST00000547263 PNMA2Q9UL42 364 aa12.81□□□□□ -0.36
GCN1-202ENST00000547263 BRCA2P51587 3418 aa12.81□□□□□ -0.36
GCN1-202ENST00000547263 LRRC37A2A6NM11 1700 aa12.81□□□□□ -0.36
GCN1-202ENST00000547263 FRMPD2Q68DX3 1309 aaPredicted RBP12.81□□□□□ -0.36
GCN1-202ENST00000547263 RPTORQ8N122 1335 aa12.81□□□□□ -0.36
GCN1-202ENST00000547263 MYH6P13533 1939 aa12.8□□□□□ -0.36
GCN1-202ENST00000547263 SH2B2O14492 632 aaPredicted RBP12.8□□□□□ -0.36
GCN1-202ENST00000547263 CAPN15O75808 1086 aa12.8□□□□□ -0.36
GCN1-202ENST00000547263 ZKSCAN1P17029 563 aaPredicted RBP12.8□□□□□ -0.36
GCN1-202ENST00000547263 MCM5P33992 734 aa12.8□□□□□ -0.36
GCN1-202ENST00000547263 SLC16A2P36021 539 aa12.8□□□□□ -0.36
GCN1-202ENST00000547263 GRM4Q14833 912 aa12.8□□□□□ -0.36
GCN1-202ENST00000547263 CCDC96Q2M329 555 aa12.8□□□□□ -0.36
GCN1-202ENST00000547263 RNF20Q5VTR2 975 aa12.8□□□□□ -0.36
GCN1-202ENST00000547263 ZNF467Q7Z7K2 595 aaPredicted RBP12.8□□□□□ -0.36
GCN1-202ENST00000547263 SGMS1Q86VZ5 419 aa12.8□□□□□ -0.36
GCN1-202ENST00000547263 CPXCR1Q8N123 301 aa12.8□□□□□ -0.36
GCN1-202ENST00000547263 FBXL16Q8N461 479 aa12.8□□□□□ -0.36
GCN1-202ENST00000547263 MSL3Q8N5Y2 521 aaKnown RBP12.8□□□□□ -0.36
GCN1-202ENST00000547263 AGBL1Q96MI9 1066 aa12.8□□□□□ -0.36
GCN1-202ENST00000547263 MMP19Q99542 508 aa12.8□□□□□ -0.36
GCN1-202ENST00000547263 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.8□□□□□ -0.36
GCN1-202ENST00000547263 MAD2L2Q9UI95 211 aa12.8□□□□□ -0.36
GCN1-202ENST00000547263 IFIT3O14879 490 aaKnown RBP12.79□□□□□ -0.36
GCN1-202ENST00000547263 REC8O95072 547 aa12.79□□□□□ -0.36
GCN1-202ENST00000547263 SGPL1O95470 568 aa12.79□□□□□ -0.36
GCN1-202ENST00000547263 CYBAP13498 195 aa12.79□□□□□ -0.36
GCN1-202ENST00000547263 EN2P19622 333 aaPredicted RBP12.79□□□□□ -0.36
GCN1-202ENST00000547263 KCTD2Q14681 263 aa12.79□□□□□ -0.36
GCN1-202ENST00000547263 WTAPQ15007 396 aa12.79□□□□□ -0.36
GCN1-202ENST00000547263 ADCK5Q3MIX3 580 aa12.79□□□□□ -0.36
GCN1-202ENST00000547263 STAG2Q8N3U4 1231 aa12.79□□□□□ -0.36
GCN1-202ENST00000547263 FAM133AQ8N9E0 248 aa12.79□□□□□ -0.36
GCN1-202ENST00000547263 IL17RAQ96F46 866 aa12.79□□□□□ -0.36
GCN1-202ENST00000547263 TMEM106CQ9BVX2 250 aa12.79□□□□□ -0.36
GCN1-202ENST00000547263 RIOX1Q9H6W3 641 aa12.79□□□□□ -0.36
GCN1-202ENST00000547263 GPCPD1Q9NPB8 672 aa12.79□□□□□ -0.36
GCN1-202ENST00000547263 A1CFQ9NQ94 594 aaKnown RBP12.79□□□□□ -0.36
GCN1-202ENST00000547263 SLC5A4Q9NY91 659 aa12.79□□□□□ -0.36
GCN1-202ENST00000547263 NRBP1Q9UHY1 535 aa12.79□□□□□ -0.36
GCN1-202ENST00000547263 MCM3APO60318 1980 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 PRC1O43663 620 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 PARP1P09874 1014 aaKnown RBP12.78□□□□□ -0.36
GCN1-202ENST00000547263 GOLGA8HP0CJ92 632 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 PRKAR2AP13861 404 aaKnown RBP12.78□□□□□ -0.36
GCN1-202ENST00000547263 SMARCA1P28370 1054 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 MNX1P50219 401 aaPredicted RBP12.78□□□□□ -0.36
GCN1-202ENST00000547263 GHRHRQ02643 423 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 KRT32Q14532 448 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 SART3Q15020 963 aaKnown RBP12.78□□□□□ -0.36
GCN1-202ENST00000547263 TMEM67Q5HYA8 995 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 WDR78Q5VTH9 848 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 LHX8Q68G74 356 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 SAMD1Q6SPF0 538 aaPredicted RBP12.78□□□□□ -0.36
GCN1-202ENST00000547263 CHST3Q7LGC8 479 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 DPP9Q86TI2 863 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 ADGRF4Q8IZF3 695 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 TMTC2Q8N394 836 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 TRPV1Q8NER1 839 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 U2AF1L4Q8WU68 220 aaKnown RBP12.78□□□□□ -0.36
GCN1-202ENST00000547263 CLEC4DQ8WXI8 215 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 NEK1Q96PY6 1258 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 USP26Q9BXU7 913 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 AGXT2Q9BYV1 514 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 RNF208Q9H0X6 261 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 ACAD9Q9H845 621 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 HMX1Q9NP08 348 aaPredicted RBP12.78□□□□□ -0.36
GCN1-202ENST00000547263 GPHNQ9NQX3 736 aaPredicted RBP12.78□□□□□ -0.36
GCN1-202ENST00000547263 RNF146Q9NTX7 359 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 ASTN1O14525 1302 aa12.78□□□□□ -0.36
GCN1-202ENST00000547263 ERICH2A1L162 156 aa12.77□□□□□ -0.37
GCN1-202ENST00000547263 CYTH3O43739 400 aa12.77□□□□□ -0.37
GCN1-202ENST00000547263 DDAH1O94760 285 aa12.77□□□□□ -0.37
GCN1-202ENST00000547263 MUM1L1Q5H9M0 696 aa12.77□□□□□ -0.37
GCN1-202ENST00000547263 DHX32Q7L7V1 743 aaKnown RBP12.77□□□□□ -0.37
GCN1-202ENST00000547263 MORC4Q8TE76 937 aa12.77□□□□□ -0.37
GCN1-202ENST00000547263 TRERF1Q96PN7 1200 aa12.77□□□□□ -0.37
GCN1-202ENST00000547263 TINF2Q9BSI4 451 aa12.77□□□□□ -0.37
GCN1-202ENST00000547263 UBA5Q9GZZ9 404 aa12.77□□□□□ -0.37
GCN1-202ENST00000547263 KATNBL1Q9H079 304 aa12.77□□□□□ -0.37
GCN1-202ENST00000547263 CPVLQ9H3G5 476 aa12.77□□□□□ -0.37
GCN1-202ENST00000547263 JMJD4Q9H9V9 463 aa12.77□□□□□ -0.37
GCN1-202ENST00000547263 CWC22Q9HCG8 908 aaKnown RBP12.77□□□□□ -0.37
GCN1-202ENST00000547263 OGDHLQ9ULD0 1010 aa12.77□□□□□ -0.37
GCN1-202ENST00000547263 CCPG1Q9ULG6 757 aa12.77□□□□□ -0.37
GCN1-202ENST00000547263 MTMR7Q9Y216 660 aa12.77□□□□□ -0.37
GCN1-202ENST00000547263 SNX14Q9Y5W7 946 aa12.77□□□□□ -0.37
GCN1-202ENST00000547263 SYNGAP1Q96PV0 1343 aa12.77□□□□□ -0.37
GCN1-202ENST00000547263 LOC102724159A0A0B4J2E5 919 aa12.76□□□□□ -0.37
GCN1-202ENST00000547263 KLRF2D3W0D1 207 aa12.76□□□□□ -0.37
GCN1-202ENST00000547263 PGK2P07205 417 aa12.76□□□□□ -0.37
GCN1-202ENST00000547263 CCND3P30281 292 aaPredicted RBP12.76□□□□□ -0.37
GCN1-202ENST00000547263 CYP2C19P33261 490 aa12.76□□□□□ -0.37
GCN1-202ENST00000547263 RCAN1P53805 252 aa12.76□□□□□ -0.37
GCN1-202ENST00000547263 SNAP25P60880 206 aa12.76□□□□□ -0.37
GCN1-202ENST00000547263 IKQ13123 557 aaPredicted RBP12.76□□□□□ -0.37
GCN1-202ENST00000547263 PWP2Q15269 919 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms