RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 NECTIN1Q15223 517 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 DLGAP5Q15398 846 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 GPATCH4Q5T3I0 446 aaKnown RBP13.79□□□□□ -0.2
COL4A6-209ENST00000545689 TPH2Q8IWU9 490 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 CABS1Q96KC9 395 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 ZNF215Q9UL58 517 aaPredicted RBP13.79□□□□□ -0.2
COL4A6-209ENST00000545689 ZNF804BA4D1E1 1349 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 XDHP47989 1333 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 CD2BP2O95400 341 aaKnown RBP13.79□□□□□ -0.2
COL4A6-209ENST00000545689 HARSP12081 509 aaKnown RBP13.79□□□□□ -0.2
COL4A6-209ENST00000545689 ADORA1P30542 326 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 CACNA2D3Q8IZS8 1091 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 LARGE2Q8N3Y3 721 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 AFAP1L2Q8N4X5 818 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 CDC23Q9UJX2 597 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 TNFAIP1Q13829 316 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 FAM98CQ17RN3 349 aaKnown RBP13.79□□□□□ -0.2
COL4A6-209ENST00000545689 FAM26FQ5R3K3 315 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 HHATQ5VTY9 493 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 REREQ9P2R6 1566 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 WDR17Q8IZU2 1322 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 IFNAR1P17181 557 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 GNPTABQ3T906 1256 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.79□□□□□ -0.2
COL4A6-209ENST00000545689 RIC8AQ9NPQ8 531 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 PCDHA5Q9Y5H7 936 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 MADDQ8WXG6 1647 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 WDR19Q8NEZ3 1342 aa13.79□□□□□ -0.2
COL4A6-209ENST00000545689 LIFRP42702 1097 aa13.78□□□□□ -0.2
COL4A6-209ENST00000545689 ZNF658Q5TYW1 1059 aaPredicted RBP13.78□□□□□ -0.2
COL4A6-209ENST00000545689 FBXO11Q86XK2 927 aa13.78□□□□□ -0.2
COL4A6-209ENST00000545689 SRGAP1Q7Z6B7 1085 aa13.78□□□□□ -0.2
COL4A6-209ENST00000545689 BBOF1Q8ND07 529 aa13.78□□□□□ -0.2
COL4A6-209ENST00000545689 TSC1Q92574 1164 aa13.78□□□□□ -0.2
COL4A6-209ENST00000545689 TEKT3Q9BXF9 490 aa13.78□□□□□ -0.2
COL4A6-209ENST00000545689 STK17AQ9UEE5 414 aa13.78□□□□□ -0.2
COL4A6-209ENST00000545689 DDX41Q9UJV9 622 aaKnown RBP13.78□□□□□ -0.2
COL4A6-209ENST00000545689 SLFN14P0C7P3 912 aa13.78□□□□□ -0.2
COL4A6-209ENST00000545689 GTF2IP78347 998 aa13.78□□□□□ -0.2
COL4A6-209ENST00000545689 SEPT2Q15019 361 aa13.78□□□□□ -0.2
COL4A6-209ENST00000545689 UAP1Q16222 522 aaPredicted RBP13.78□□□□□ -0.2
COL4A6-209ENST00000545689 ENOX1Q8TC92 643 aaKnown RBP13.78□□□□□ -0.2
COL4A6-209ENST00000545689 DESI2Q9BSY9 194 aa13.78□□□□□ -0.2
COL4A6-209ENST00000545689 PRR36Q9H6K5 1346 aa13.78□□□□□ -0.2
COL4A6-209ENST00000545689 CHD1O14646 1710 aa13.78□□□□□ -0.2
COL4A6-209ENST00000545689 A0A1B0GUA9 196 aa13.78□□□□□ -0.2
COL4A6-209ENST00000545689 PRPF3O43395 683 aaKnown RBP13.78□□□□□ -0.2
COL4A6-209ENST00000545689 PTPN12Q05209 780 aaKnown RBP13.78□□□□□ -0.2
COL4A6-209ENST00000545689 PUS3Q9BZE2 481 aaKnown RBP13.78□□□□□ -0.2
COL4A6-209ENST00000545689 PYCARDQ9ULZ3 195 aa13.78□□□□□ -0.2
COL4A6-209ENST00000545689 DDX39AO00148 427 aaKnown RBP13.78□□□□□ -0.2
COL4A6-209ENST00000545689 TRIM31Q9BZY9 425 aa13.78□□□□□ -0.2
COL4A6-209ENST00000545689 GAP43P17677 238 aa13.77□□□□□ -0.2
COL4A6-209ENST00000545689 MRPS9P82933 396 aaKnown RBP13.77□□□□□ -0.2
COL4A6-209ENST00000545689 KRT71Q3SY84 523 aa13.77□□□□□ -0.2
COL4A6-209ENST00000545689 RWDD2AQ9UIY3 292 aa13.77□□□□□ -0.2
COL4A6-209ENST00000545689 ERBB3P21860 1342 aa13.77□□□□□ -0.2
COL4A6-209ENST00000545689 RNF17Q9BXT8 1623 aaKnown RBP13.77□□□□□ -0.2
COL4A6-209ENST00000545689 LMNTD2Q8IXW0 634 aa13.77□□□□□ -0.2
COL4A6-209ENST00000545689 NIM1KQ8IY84 436 aa13.77□□□□□ -0.2
COL4A6-209ENST00000545689 CMTR1Q8N1G2 835 aaKnown RBP13.77□□□□□ -0.2
COL4A6-209ENST00000545689 TYW1Q9NV66 732 aaKnown RBP13.77□□□□□ -0.2
COL4A6-209ENST00000545689 KRIT1O00522 736 aa13.77□□□□□ -0.21
COL4A6-209ENST00000545689 CTNNA1P35221 906 aaKnown RBP13.77□□□□□ -0.21
COL4A6-209ENST00000545689 CNOT6LQ96LI5 555 aaKnown RBP13.77□□□□□ -0.21
COL4A6-209ENST00000545689 IGSF3O75054 1194 aa13.77□□□□□ -0.21
COL4A6-209ENST00000545689 PRR16Q569H4 304 aa13.77□□□□□ -0.21
COL4A6-209ENST00000545689 BCORL1Q5H9F3 1711 aa13.77□□□□□ -0.21
COL4A6-209ENST00000545689 CCDC62Q6P9F0 684 aa13.77□□□□□ -0.21
COL4A6-209ENST00000545689 GPKOWQ92917 476 aaPredicted RBP eCLIP13.77□□□□□ -0.21
COL4A6-209ENST00000545689 MIS12Q9H081 205 aa13.77□□□□□ -0.21
COL4A6-209ENST00000545689 I3L4J1 428 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 H2AFZP0C0S5 128 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 CRKLP46109 303 aaKnown RBP13.76□□□□□ -0.21
COL4A6-209ENST00000545689 H2AFVQ71UI9 128 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 KCNK3O14649 394 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 RGS16O15492 202 aaPredicted RBP13.76□□□□□ -0.21
COL4A6-209ENST00000545689 ADAM9Q13443 819 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 AOC3Q16853 763 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 ZNF827Q17R98 1081 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 CERKLQ49MI3 558 aaPredicted RBP13.76□□□□□ -0.21
COL4A6-209ENST00000545689 THAP9Q9H5L6 903 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 HOMER3Q9NSC5 361 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 RNF14Q9UBS8 474 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 SRPRBQ9Y5M8 271 aaKnown RBP13.76□□□□□ -0.21
COL4A6-209ENST00000545689 TMEM94Q12767 1356 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 LOC102724428A0A0B4J2F2 783 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 RNF40O75150 1001 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 ARL1P40616 181 aaPredicted RBP13.76□□□□□ -0.21
COL4A6-209ENST00000545689 SIK1P57059 783 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 ARHGAP44Q17R89 818 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 PPP1R2P3Q6NXS1 205 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 P2RX5Q93086 422 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 FAM81BQ96LP2 452 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 TUBGCP2Q9BSJ2 902 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 HAUS2Q9NVX0 235 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 LMNB1P20700 586 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 MAN1A1P33908 653 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 PHBP35232 272 aa13.76□□□□□ -0.21
COL4A6-209ENST00000545689 NEDD9Q14511 834 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms