RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 TRIM21P19474 475 aaKnown RBP16.9■□□□□ 0.3
USP28-214ENST00000545540 FAM193AP78312 1265 aa16.9■□□□□ 0.3
USP28-214ENST00000545540 CYP26C1Q6V0L0 522 aa16.9■□□□□ 0.3
USP28-214ENST00000545540 ANKRD13CQ8N6S4 541 aa16.9■□□□□ 0.3
USP28-214ENST00000545540 ANKRD20A12PQ8NF67 263 aa16.9■□□□□ 0.3
USP28-214ENST00000545540 KANSL2Q9H9L4 492 aa16.9■□□□□ 0.3
USP28-214ENST00000545540 SMARCAL1Q9NZC9 954 aa16.9■□□□□ 0.3
USP28-214ENST00000545540 LIMA1Q9UHB6 759 aaKnown RBP16.9■□□□□ 0.3
USP28-214ENST00000545540 ADAM21Q9UKJ8 722 aa16.9■□□□□ 0.3
USP28-214ENST00000545540 LUC7L2Q9Y383 392 aaKnown RBP16.9■□□□□ 0.3
USP28-214ENST00000545540 DISP2A7MBM2 1401 aa16.9■□□□□ 0.3
USP28-214ENST00000545540 MATR3P43243 847 aaKnown RBP eCLIP16.9■□□□□ 0.3
USP28-214ENST00000545540 CSGALNACT2Q8N6G5 542 aa16.9■□□□□ 0.3
USP28-214ENST00000545540 MAD2L2Q9UI95 211 aa16.9■□□□□ 0.3
USP28-214ENST00000545540 PCDHA4Q9UN74 947 aa16.9■□□□□ 0.3
USP28-214ENST00000545540 FRMPD2Q68DX3 1309 aaPredicted RBP16.89■□□□□ 0.29
USP28-214ENST00000545540 CTAGE15A4D2H0 777 aa16.89■□□□□ 0.29
USP28-214ENST00000545540 CTAGE8P0CG41 777 aa16.89■□□□□ 0.29
USP28-214ENST00000545540 TXKP42681 527 aa16.89■□□□□ 0.29
USP28-214ENST00000545540 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.89■□□□□ 0.29
USP28-214ENST00000545540 CTAGE6Q86UF2 777 aa16.89■□□□□ 0.29
USP28-214ENST00000545540 TMTC1Q8IUR5 882 aa16.89■□□□□ 0.29
USP28-214ENST00000545540 CTAGE4Q8IX94 777 aa16.89■□□□□ 0.29
USP28-214ENST00000545540 ZNF444Q8N0Y2 327 aaPredicted RBP16.89■□□□□ 0.29
USP28-214ENST00000545540 ASIC1P78348 528 aa16.89■□□□□ 0.29
USP28-214ENST00000545540 PDE4DQ08499 809 aa16.89■□□□□ 0.29
USP28-214ENST00000545540 ENOX2Q16206 610 aaKnown RBP16.89■□□□□ 0.29
USP28-214ENST00000545540 BEND6Q5SZJ8 279 aaPredicted RBP16.89■□□□□ 0.29
USP28-214ENST00000545540 WDR59Q6PJI9 974 aa16.89■□□□□ 0.29
USP28-214ENST00000545540 MB21D1Q8N884 522 aa16.89■□□□□ 0.29
USP28-214ENST00000545540 MMS19Q96T76 1030 aa16.89■□□□□ 0.29
USP28-214ENST00000545540 RABEP2Q9H5N1 569 aa16.89■□□□□ 0.29
USP28-214ENST00000545540 FAN1Q9Y2M0 1017 aa16.89■□□□□ 0.29
USP28-214ENST00000545540 NAPAP54920 295 aa16.89■□□□□ 0.29
USP28-214ENST00000545540 ANKRD40Q6AI12 368 aa16.89■□□□□ 0.29
USP28-214ENST00000545540 KIAA1328Q86T90 577 aa16.89■□□□□ 0.29
USP28-214ENST00000545540 ADSSL1Q8N142 457 aa16.89■□□□□ 0.29
USP28-214ENST00000545540 CCDC155Q8N6L0 562 aa16.89■□□□□ 0.29
USP28-214ENST00000545540 TMEM47Q9BQJ4 181 aa16.89■□□□□ 0.29
USP28-214ENST00000545540 MYO6Q9UM54 1294 aa16.89■□□□□ 0.29
USP28-214ENST00000545540 KLRF2D3W0D1 207 aa16.88■□□□□ 0.29
USP28-214ENST00000545540 F8W031 263 aaPredicted RBP16.88■□□□□ 0.29
USP28-214ENST00000545540 ZPR1O75312 459 aa16.88■□□□□ 0.29
USP28-214ENST00000545540 KIF5BP33176 963 aa16.88■□□□□ 0.29
USP28-214ENST00000545540 TNNT3P45378 269 aaPredicted RBP16.88■□□□□ 0.29
USP28-214ENST00000545540 PPP2R5BQ15173 497 aa16.88■□□□□ 0.29
USP28-214ENST00000545540 SF3B3Q15393 1217 aaKnown RBP16.88■□□□□ 0.29
USP28-214ENST00000545540 GLIS3Q8NEA6 775 aa16.88■□□□□ 0.29
USP28-214ENST00000545540 BCL9LQ86UU0 1499 aa16.88■□□□□ 0.29
USP28-214ENST00000545540 SPATA31A1Q5TZJ5 1347 aa16.88■□□□□ 0.29
USP28-214ENST00000545540 CXCR5P32302 372 aa16.88■□□□□ 0.29
USP28-214ENST00000545540 TBC1D8BQ0IIM8 1120 aa16.88■□□□□ 0.29
USP28-214ENST00000545540 LRRC41Q15345 812 aa16.88■□□□□ 0.29
USP28-214ENST00000545540 FAM207AQ9NSI2 230 aaPredicted RBP16.88■□□□□ 0.29
USP28-214ENST00000545540 LDHBP07195 334 aaKnown RBP16.87■□□□□ 0.29
USP28-214ENST00000545540 MTIF2P46199 727 aaKnown RBP16.87■□□□□ 0.29
USP28-214ENST00000545540 RCAN1P53805 252 aa16.87■□□□□ 0.29
USP28-214ENST00000545540 HERVK_113P62684 666 aa16.87■□□□□ 0.29
USP28-214ENST00000545540 ORC4O43929 436 aa16.87■□□□□ 0.29
USP28-214ENST00000545540 BMP15O95972 392 aa16.87■□□□□ 0.29
USP28-214ENST00000545540 RAD51AP2Q09MP3 1159 aa16.87■□□□□ 0.29
USP28-214ENST00000545540 FOXR1Q6PIV2 292 aa16.87■□□□□ 0.29
USP28-214ENST00000545540 OR8K1Q8NGG5 319 aa16.87■□□□□ 0.29
USP28-214ENST00000545540 TUBGCP2Q9BSJ2 902 aa16.87■□□□□ 0.29
USP28-214ENST00000545540 EHD2Q9NZN4 543 aa16.87■□□□□ 0.29
USP28-214ENST00000545540 TTF2Q9UNY4 1162 aaKnown RBP16.87■□□□□ 0.29
USP28-214ENST00000545540 CCDC66A2RUB6 948 aa16.87■□□□□ 0.29
USP28-214ENST00000545540 LRRIQ3A6PVS8 624 aaPredicted RBP16.87■□□□□ 0.29
USP28-214ENST00000545540 KLRC4O43908 158 aa16.87■□□□□ 0.29
USP28-214ENST00000545540 IDEP14735 1019 aa16.87■□□□□ 0.29
USP28-214ENST00000545540 C12orf60Q5U649 245 aa16.87■□□□□ 0.29
USP28-214ENST00000545540 COA7Q96BR5 231 aa16.87■□□□□ 0.29
USP28-214ENST00000545540 NAA15Q9BXJ9 866 aaKnown RBP16.87■□□□□ 0.29
USP28-214ENST00000545540 ATP8A2Q9NTI2 1148 aa16.87■□□□□ 0.29
USP28-214ENST00000545540 MAGEC2Q9UBF1 373 aaPredicted RBP16.87■□□□□ 0.29
USP28-214ENST00000545540 DUOX1Q9NRD9 1551 aa16.86■□□□□ 0.29
USP28-214ENST00000545540 CCDC151A5D8V7 595 aa16.86■□□□□ 0.29
USP28-214ENST00000545540 CEP112Q8N8E3 955 aa16.86■□□□□ 0.29
USP28-214ENST00000545540 MTA3Q9BTC8 594 aa16.86■□□□□ 0.29
USP28-214ENST00000545540 JADE2Q9NQC1 790 aa16.86■□□□□ 0.29
USP28-214ENST00000545540 EPHB6O15197 1021 aa16.86■□□□□ 0.29
USP28-214ENST00000545540 FGRP09769 529 aa16.86■□□□□ 0.29
USP28-214ENST00000545540 TSR1Q2NL82 804 aaKnown RBP16.86■□□□□ 0.29
USP28-214ENST00000545540 CABP7Q86V35 215 aa16.86■□□□□ 0.29
USP28-214ENST00000545540 TBC1D7Q9P0N9 293 aa16.86■□□□□ 0.29
USP28-214ENST00000545540 CACNA1SQ13698 1873 aa16.86■□□□□ 0.29
USP28-214ENST00000545540 SMCO2A6NFE2 343 aa16.86■□□□□ 0.29
USP28-214ENST00000545540 LRRC10BA6NIK2 292 aa16.86■□□□□ 0.29
USP28-214ENST00000545540 RASSF10A6NK89 507 aa16.86■□□□□ 0.29
USP28-214ENST00000545540 PICALMQ13492 652 aa16.86■□□□□ 0.29
USP28-214ENST00000545540 PIGSQ96S52 555 aa16.86■□□□□ 0.29
USP28-214ENST00000545540 DUSP9Q99956 384 aaKnown RBP16.86■□□□□ 0.29
USP28-214ENST00000545540 ARPP21Q9UBL0 812 aaPredicted RBP16.86■□□□□ 0.29
USP28-214ENST00000545540 LCMT1Q9UIC8 334 aa16.86■□□□□ 0.29
USP28-214ENST00000545540 VGLL3A8MV65 326 aa16.85■□□□□ 0.29
USP28-214ENST00000545540 LONP1P36776 959 aaKnown RBP16.85■□□□□ 0.29
USP28-214ENST00000545540 APBA1Q02410 837 aa16.85■□□□□ 0.29
USP28-214ENST00000545540 POTEDQ86YR6 584 aa16.85■□□□□ 0.29
USP28-214ENST00000545540 POLD4Q9HCU8 107 aa16.85■□□□□ 0.29
USP28-214ENST00000545540 STXBP3O00186 592 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms