RNA–Protein interactions for RNA: ENST00000545223.1

PRKAB1-208, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 2

Gene PRKAB1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-208ENST00000545223 QRICH1Q2TAL8 776 aa8.41□□□□□ -1.06
PRKAB1-208ENST00000545223 FAM160B2Q86V87 743 aa8.41□□□□□ -1.06
PRKAB1-208ENST00000545223 CPXCR1Q8N123 301 aa8.41□□□□□ -1.06
PRKAB1-208ENST00000545223 REPS2Q8NFH8 660 aa8.41□□□□□ -1.06
PRKAB1-208ENST00000545223 CHURC1Q8WUH1 139 aa8.41□□□□□ -1.06
PRKAB1-208ENST00000545223 COA7Q96BR5 231 aa8.41□□□□□ -1.06
PRKAB1-208ENST00000545223 SHISA4Q96DD7 197 aa8.41□□□□□ -1.06
PRKAB1-208ENST00000545223 MTMR8Q96EF0 704 aa8.41□□□□□ -1.06
PRKAB1-208ENST00000545223 AGBL1Q96MI9 1066 aa8.41□□□□□ -1.06
PRKAB1-208ENST00000545223 PAGR1Q9BTK6 254 aa8.41□□□□□ -1.06
PRKAB1-208ENST00000545223 SLC26A6Q9BXS9 759 aa8.41□□□□□ -1.06
PRKAB1-208ENST00000545223 RBM28Q9NW13 759 aaKnown RBP8.41□□□□□ -1.06
PRKAB1-208ENST00000545223 RNF186Q9NXI6 227 aa8.41□□□□□ -1.06
PRKAB1-208ENST00000545223 CPA4Q9UI42 421 aa8.41□□□□□ -1.06
PRKAB1-208ENST00000545223 RIPK3Q9Y572 518 aa8.41□□□□□ -1.06
PRKAB1-208ENST00000545223 ADGRA2Q96PE1 1338 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 CPLX1O14810 134 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 ADAMTS3O15072 1205 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 FOXN1O15353 648 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 TRPA1O75762 1119 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 IFNAR1P17181 557 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 MCM2P49736 904 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 GNAQP50148 359 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 SREBF2Q12772 1141 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 CRHR2Q13324 411 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 CUL4AQ13619 759 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 TAF1CQ15572 869 aaPredicted RBP8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 CDC37Q16543 378 aaPredicted RBP8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 TYW1BQ6NUM6 668 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 LBX2Q6XYB7 198 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 HSCBQ8IWL3 235 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 ANKRD13CQ8N6S4 541 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 SMARCC2Q8TAQ2 1214 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 GPKOWQ92917 476 aaPredicted RBP eCLIP8.4□□□□□ -1.066e-10■■■■□ 24
PRKAB1-208ENST00000545223 SPZ1Q9BXG8 430 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 RANBP17Q9H2T7 1088 aaKnown RBP8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 SLC38A10Q9HBR0 1119 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 SH2B1Q9NRF2 756 aaPredicted RBP8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 HOXC10Q9NYD6 342 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 TSKSQ9UJT2 592 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 SLC45A1Q9Y2W3 748 aa8.4□□□□□ -1.06
PRKAB1-208ENST00000545223 BAZ2BQ9UIF8 2168 aaKnown RBP8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 CCDC196A0A1B0GTZ2 297 aa8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 PTPDC1A2A3K4 754 aa8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 ZBTB5O15062 677 aa8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 PRPF3O43395 683 aaKnown RBP8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 ZBED4O75132 1171 aa8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 FMNL1O95466 1100 aaPredicted RBP8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 SMARCA1P28370 1054 aa8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 FOSBP53539 338 aa8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 CAP1Q01518 475 aa8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 SSRP1Q08945 709 aaKnown RBP8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 PABPC4Q13310 644 aaKnown RBP eCLIP8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 PLS1Q14651 629 aa8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 PPP2R5BQ15173 497 aa8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 USH1GQ495M9 461 aa8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 OTUD7BQ6GQQ9 843 aa8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 C17orf99Q6UX52 265 aa8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 SMCR8Q8TEV9 937 aaPredicted RBP8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 TBC1D5Q92609 795 aa8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 LZTS2Q9BRK4 669 aa8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 PNMA3Q9UL41 463 aa8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 ZNF214Q9UL59 606 aaPredicted RBP8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 SMCHD1A6NHR9 2005 aa8.39□□□□□ -1.07
PRKAB1-208ENST00000545223 COL11A1P12107 1806 aaPredicted RBP8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 MYPNQ86TC9 1320 aa8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 PNMA6FA0A0J9YX94 578 aa8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 CA12O43570 354 aa8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 TLR2O60603 784 aa8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 ICAM1P05362 532 aa8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 BCRP11274 1271 aa8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 ALAS1P13196 640 aa8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 GJB2P29033 226 aa8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 CTGFP29279 349 aa8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 MUM1L1Q5H9M0 696 aa8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 WWC2Q6AWC2 1192 aa8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 IL27Q8NEV9 243 aa8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 RRP36Q96EU6 259 aaKnown RBP8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 PARK7Q99497 189 aaKnown RBP8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 MOV10L1Q9BXT6 1211 aaKnown RBP8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 RNF26Q9BY78 433 aaPredicted RBP8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 PORCNQ9H237 461 aa8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 EFCC1Q9HA90 598 aa8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 ZFYVE28Q9HCC9 887 aa8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 HOMER2Q9NSB8 354 aa8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 VPS54Q9P1Q0 977 aa8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 ORC3Q9UBD5 711 aaPredicted RBP8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 THSD7BQ9C0I4 1608 aa8.38□□□□□ -1.07
PRKAB1-208ENST00000545223 A0A0G2JMZ2 1700 aa8.37□□□□□ -1.07
PRKAB1-208ENST00000545223 OPLAHO14841 1288 aa8.37□□□□□ -1.07
PRKAB1-208ENST00000545223 SCG2P13521 617 aa8.37□□□□□ -1.07
PRKAB1-208ENST00000545223 STAT3P40763 770 aa8.37□□□□□ -1.07
PRKAB1-208ENST00000545223 ERVK-9P63128 1117 aa8.37□□□□□ -1.07
PRKAB1-208ENST00000545223 ERVK-24P63145 666 aa8.37□□□□□ -1.07
PRKAB1-208ENST00000545223 GUCY1B3Q02153 619 aa8.37□□□□□ -1.07
PRKAB1-208ENST00000545223 PFKFB3Q16875 520 aaPredicted RBP8.37□□□□□ -1.07
PRKAB1-208ENST00000545223 SNRNP48Q6IEG0 339 aaKnown RBP8.37□□□□□ -1.07
PRKAB1-208ENST00000545223 CPLX2Q6PUV4 134 aaKnown RBP8.37□□□□□ -1.07
PRKAB1-208ENST00000545223 HEATR3Q7Z4Q2 680 aa8.37□□□□□ -1.07
PRKAB1-208ENST00000545223 FBXO11Q86XK2 927 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms