RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 HIPK3Q9H422 1215 aa17.52■□□□□ 0.4
COPS7A-220ENST00000544725 PAG1Q9NWQ8 432 aa17.52■□□□□ 0.4
COPS7A-220ENST00000544725 FBXO40Q9UH90 709 aa17.52■□□□□ 0.4
COPS7A-220ENST00000544725 YBX2Q9Y2T7 364 aaKnown RBP17.52■□□□□ 0.4
COPS7A-220ENST00000544725 F5H6K3 240 aa17.51■□□□□ 0.39
COPS7A-220ENST00000544725 TRANK1O15050 2925 aa17.51■□□□□ 0.39
COPS7A-220ENST00000544725 CABYRO75952 493 aa17.51■□□□□ 0.39
COPS7A-220ENST00000544725 NKX3-2P78367 333 aa17.51■□□□□ 0.39
COPS7A-220ENST00000544725 KLRC3Q07444 240 aa17.51■□□□□ 0.39
COPS7A-220ENST00000544725 CTR9Q6PD62 1173 aa17.51■□□□□ 0.39
COPS7A-220ENST00000544725 CHST13Q8NET6 341 aa17.51■□□□□ 0.39
COPS7A-220ENST00000544725 KIF1BPQ96EK5 621 aa17.51■□□□□ 0.39
COPS7A-220ENST00000544725 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.51■□□□□ 0.39
COPS7A-220ENST00000544725 SEZ6LQ9BYH1 1024 aa17.51■□□□□ 0.39
COPS7A-220ENST00000544725 SLC4A4Q9Y6R1 1079 aa17.51■□□□□ 0.39
COPS7A-220ENST00000544725 REV3LO60673 3130 aa17.51■□□□□ 0.39
COPS7A-220ENST00000544725 NDUFB10O96000 172 aa17.5■□□□□ 0.39
COPS7A-220ENST00000544725 RLBP1P12271 317 aa17.5■□□□□ 0.39
COPS7A-220ENST00000544725 SLFNL1Q499Z3 407 aa17.5■□□□□ 0.39
COPS7A-220ENST00000544725 PPP2R2DQ66LE6 453 aa17.5■□□□□ 0.39
COPS7A-220ENST00000544725 OTOP2Q7RTS6 562 aa17.5■□□□□ 0.39
COPS7A-220ENST00000544725 MICALL1Q8N3F8 863 aa17.5■□□□□ 0.39
COPS7A-220ENST00000544725 SLC43A3Q8NBI5 491 aa17.5■□□□□ 0.39
COPS7A-220ENST00000544725 FGD4Q96M96 766 aa17.5■□□□□ 0.39
COPS7A-220ENST00000544725 RAVER2Q9HCJ3 691 aaKnown RBP17.5■□□□□ 0.39
COPS7A-220ENST00000544725 NYAP2Q9P242 653 aa17.5■□□□□ 0.39
COPS7A-220ENST00000544725 ARPP21Q9UBL0 812 aaPredicted RBP17.5■□□□□ 0.39
COPS7A-220ENST00000544725 SLC4A7Q9Y6M7 1214 aa17.5■□□□□ 0.39
COPS7A-220ENST00000544725 ZBED9Q6R2W3 1325 aa17.49■□□□□ 0.39
COPS7A-220ENST00000544725 BAZ2AQ9UIF9 1905 aaKnown RBP17.49■□□□□ 0.39
COPS7A-220ENST00000544725 CTAGE5O15320 804 aa17.49■□□□□ 0.39
COPS7A-220ENST00000544725 BMP1P13497 986 aa17.49■□□□□ 0.39
COPS7A-220ENST00000544725 BEX3Q00994 111 aa17.49■□□□□ 0.39
COPS7A-220ENST00000544725 TNFAIP2Q03169 654 aa17.49■□□□□ 0.39
COPS7A-220ENST00000544725 UBE3CQ15386 1083 aa17.49■□□□□ 0.39
COPS7A-220ENST00000544725 NOL8Q76FK4 1167 aaKnown RBP17.49■□□□□ 0.39
COPS7A-220ENST00000544725 CCDC144CPQ8IYA2 1237 aa17.49■□□□□ 0.39
COPS7A-220ENST00000544725 RPUSD2Q8IZ73 545 aaKnown RBP17.49■□□□□ 0.39
COPS7A-220ENST00000544725 KIFC2Q96AC6 838 aa17.49■□□□□ 0.39
COPS7A-220ENST00000544725 NECAB3Q96P71 396 aaPredicted RBP17.49■□□□□ 0.39
COPS7A-220ENST00000544725 BOLA2Q9H3K6 86 aa17.49■□□□□ 0.39
COPS7A-220ENST00000544725 SLC38A10Q9HBR0 1119 aa17.49■□□□□ 0.39
COPS7A-220ENST00000544725 PCDHA11Q9Y5I1 949 aa17.49■□□□□ 0.39
COPS7A-220ENST00000544725 UMODL1Q5DID0 1318 aa17.48■□□□□ 0.39
COPS7A-220ENST00000544725 OAZ1P54368 228 aa17.48■□□□□ 0.39
COPS7A-220ENST00000544725 CCL23P55773 120 aa17.48■□□□□ 0.39
COPS7A-220ENST00000544725 ITGA7Q13683 1181 aa17.48■□□□□ 0.39
COPS7A-220ENST00000544725 CXCL17Q6UXB2 119 aa17.48■□□□□ 0.39
COPS7A-220ENST00000544725 KATNBL1Q9H079 304 aa17.48■□□□□ 0.39
COPS7A-220ENST00000544725 MKNK2Q9HBH9 465 aa17.48■□□□□ 0.39
COPS7A-220ENST00000544725 ZEB2O60315 1214 aa17.47■□□□□ 0.39
COPS7A-220ENST00000544725 HOXD11P31277 338 aaPredicted RBP17.47■□□□□ 0.39
COPS7A-220ENST00000544725 RABGGTBP53611 331 aa17.47■□□□□ 0.39
COPS7A-220ENST00000544725 SKIV2LQ15477 1246 aaKnown RBP17.47■□□□□ 0.39
COPS7A-220ENST00000544725 ZSCAN25Q6NSZ9 544 aa17.47■□□□□ 0.39
COPS7A-220ENST00000544725 NOC4LQ9BVI4 516 aaKnown RBP17.47■□□□□ 0.39
COPS7A-220ENST00000544725 AP5M1Q9H0R1 490 aa17.47■□□□□ 0.39
COPS7A-220ENST00000544725 BCL11AQ9H165 835 aa17.47■□□□□ 0.39
COPS7A-220ENST00000544725 CLIP2Q9UDT6 1046 aa17.47■□□□□ 0.39
COPS7A-220ENST00000544725 FEM1BQ9UK73 627 aa17.47■□□□□ 0.39
COPS7A-220ENST00000544725 ZBBXA8MT70 800 aa17.46■□□□□ 0.39
COPS7A-220ENST00000544725 ERC2O15083 957 aa17.46■□□□□ 0.39
COPS7A-220ENST00000544725 ATP5JP18859 108 aa17.46■□□□□ 0.39
COPS7A-220ENST00000544725 RASA1P20936 1047 aa17.46■□□□□ 0.39
COPS7A-220ENST00000544725 TFF2Q03403 129 aa17.46■□□□□ 0.39
COPS7A-220ENST00000544725 FSCN1Q16658 493 aaKnown RBP17.46■□□□□ 0.39
COPS7A-220ENST00000544725 TLK2Q86UE8 772 aa17.46■□□□□ 0.39
COPS7A-220ENST00000544725 HAUS7Q99871 368 aa17.46■□□□□ 0.39
COPS7A-220ENST00000544725 GNEQ9Y223 722 aaKnown RBP17.46■□□□□ 0.39
COPS7A-220ENST00000544725 ARIH1Q9Y4X5 557 aaPredicted RBP17.46■□□□□ 0.39
COPS7A-220ENST00000544725 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.45■□□□□ 0.38
COPS7A-220ENST00000544725 ASB14A6NK59 587 aa17.45■□□□□ 0.38
COPS7A-220ENST00000544725 GTPBP6O43824 516 aaPredicted RBP17.45■□□□□ 0.38
COPS7A-220ENST00000544725 FDX1P10109 184 aa17.45■□□□□ 0.38
COPS7A-220ENST00000544725 ATP2A2P16615 1042 aaKnown RBP17.45■□□□□ 0.38
COPS7A-220ENST00000544725 CNTN2Q02246 1040 aa17.45■□□□□ 0.38
COPS7A-220ENST00000544725 SBK1Q52WX2 424 aa17.45■□□□□ 0.38
COPS7A-220ENST00000544725 FAM133AQ8N9E0 248 aa17.45■□□□□ 0.38
COPS7A-220ENST00000544725 TRPV6Q9H1D0 765 aa17.45■□□□□ 0.38
COPS7A-220ENST00000544725 WNT8AQ9H1J5 351 aa17.45■□□□□ 0.38
COPS7A-220ENST00000544725 ACAD9Q9H845 621 aa17.45■□□□□ 0.38
COPS7A-220ENST00000544725 HOMER2Q9NSB8 354 aa17.45■□□□□ 0.38
COPS7A-220ENST00000544725 HCN4Q9Y3Q4 1203 aa17.45■□□□□ 0.38
COPS7A-220ENST00000544725 ASTN1O14525 1302 aa17.45■□□□□ 0.38
COPS7A-220ENST00000544725 CCER2I3L3R5 266 aa17.44■□□□□ 0.38
COPS7A-220ENST00000544725 DYNC1LI2O43237 492 aaPredicted RBP17.44■□□□□ 0.38
COPS7A-220ENST00000544725 B4GALT4O60513 344 aa17.44■□□□□ 0.38
COPS7A-220ENST00000544725 RAB11FIP3O75154 756 aa17.44■□□□□ 0.38
COPS7A-220ENST00000544725 HMMRO75330 724 aa17.44■□□□□ 0.38
COPS7A-220ENST00000544725 CHGBP05060 677 aa17.44■□□□□ 0.38
COPS7A-220ENST00000544725 PFKMP08237 780 aa17.44■□□□□ 0.38
COPS7A-220ENST00000544725 MYOGP15173 224 aa17.44■□□□□ 0.38
COPS7A-220ENST00000544725 POU3F3P20264 500 aaPredicted RBP17.44■□□□□ 0.38
COPS7A-220ENST00000544725 KCNQ1P51787 676 aa17.44■□□□□ 0.38
COPS7A-220ENST00000544725 PUS7LQ9H0K6 701 aaKnown RBP17.44■□□□□ 0.38
COPS7A-220ENST00000544725 SYNPO2Q9UMS6 1093 aa17.44■□□□□ 0.38
COPS7A-220ENST00000544725 MCM3APO60318 1980 aa17.44■□□□□ 0.38
COPS7A-220ENST00000544725 GRIN2DO15399 1336 aa17.44■□□□□ 0.38
COPS7A-220ENST00000544725 GREB1LQ9C091 1923 aaPredicted RBP17.43■□□□□ 0.38
COPS7A-220ENST00000544725 TMEM67Q5HYA8 995 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms