RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 GPAA1O43292 621 aa7.76□□□□□ -1.17
CDCA3-209ENST00000544610 STRNO43815 780 aa7.76□□□□□ -1.17
CDCA3-209ENST00000544610 POLR3DP05423 398 aaPredicted RBP7.76□□□□□ -1.17
CDCA3-209ENST00000544610 HSPD1P10809 573 aaKnown RBP7.76□□□□□ -1.17
CDCA3-209ENST00000544610 PSMA5P28066 241 aa7.76□□□□□ -1.17
CDCA3-209ENST00000544610 ADORA2AP29274 412 aa7.76□□□□□ -1.17
CDCA3-209ENST00000544610 CNGA1P29973 690 aa7.76□□□□□ -1.17
CDCA3-209ENST00000544610 ANP32AP39687 249 aaKnown RBP7.76□□□□□ -1.17
CDCA3-209ENST00000544610 MCM2P49736 904 aa7.76□□□□□ -1.17
CDCA3-209ENST00000544610 RTP1P59025 263 aa7.76□□□□□ -1.17
CDCA3-209ENST00000544610 DSG2Q14126 1118 aa7.76□□□□□ -1.17
CDCA3-209ENST00000544610 SNX17Q15036 470 aa7.76□□□□□ -1.17
CDCA3-209ENST00000544610 TMEM179Q6ZVK1 233 aa7.76□□□□□ -1.17
CDCA3-209ENST00000544610 DPP9Q86TI2 863 aa7.76□□□□□ -1.17
CDCA3-209ENST00000544610 FBXL16Q8N461 479 aa7.76□□□□□ -1.17
CDCA3-209ENST00000544610 SNX21Q969T3 373 aa7.76□□□□□ -1.17
CDCA3-209ENST00000544610 GUCD1Q96NT3 240 aa7.76□□□□□ -1.17
CDCA3-209ENST00000544610 STRBPQ96SI9 672 aaKnown RBP7.76□□□□□ -1.17
CDCA3-209ENST00000544610 LBHD1Q9BQE6 289 aaPredicted RBP7.76□□□□□ -1.17
CDCA3-209ENST00000544610 MTA3Q9BTC8 594 aa7.76□□□□□ -1.17
CDCA3-209ENST00000544610 CRNKL1Q9BZJ0 848 aaKnown RBP7.76□□□□□ -1.17
CDCA3-209ENST00000544610 TANGO6Q9C0B7 1094 aa7.76□□□□□ -1.17
CDCA3-209ENST00000544610 HOXC10Q9NYD6 342 aa7.76□□□□□ -1.17
CDCA3-209ENST00000544610 KBTBD13C9JR72 458 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 MPHOSPH10O00566 681 aaKnown RBP7.75□□□□□ -1.17
CDCA3-209ENST00000544610 SEPT4O43236 478 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 COBLO75128 1261 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 ERCC3P19447 782 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 AMHR2Q16671 573 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 KIAA1755Q5JYT7 1200 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 GJC2Q5T442 439 aaPredicted RBP7.75□□□□□ -1.17
CDCA3-209ENST00000544610 PARP9Q8IXQ6 854 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 ABRAQ8N0Z2 381 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 ZNF710Q8N1W2 664 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 LCORLQ8N3X6 602 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 MB21D1Q8N884 522 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 SLC44A5Q8NCS7 719 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 ARRDC4Q8NCT1 418 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 TMC2Q8TDI7 906 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 SDR42E1Q8WUS8 393 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 PUS7LQ9H0K6 701 aaKnown RBP7.75□□□□□ -1.17
CDCA3-209ENST00000544610 BCL11AQ9H165 835 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 ALDH8A1Q9H2A2 487 aaPredicted RBP7.75□□□□□ -1.17
CDCA3-209ENST00000544610 MROH8Q9H579 483 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 DCP1AQ9NPI6 582 aaPredicted RBP7.75□□□□□ -1.17
CDCA3-209ENST00000544610 MCM9Q9NXL9 1143 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 PRKAG2Q9UGJ0 569 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 SWAP70Q9UH65 585 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 ANAPC4Q9UJX5 808 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 RLFQ13129 1914 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 WDR19Q8NEZ3 1342 aa7.75□□□□□ -1.17
CDCA3-209ENST00000544610 ROBO3Q96MS0 1386 aa7.74□□□□□ -1.17
CDCA3-209ENST00000544610 PRUNE2Q8WUY3 3088 aa7.74□□□□□ -1.17
CDCA3-209ENST00000544610 FLOT1O75955 427 aa7.74□□□□□ -1.17
CDCA3-209ENST00000544610 CYP2D6P10635 497 aa7.74□□□□□ -1.17
CDCA3-209ENST00000544610 ICA1Q05084 483 aa7.74□□□□□ -1.17
CDCA3-209ENST00000544610 IMMTQ16891 758 aaKnown RBP7.74□□□□□ -1.17
CDCA3-209ENST00000544610 SBK1Q52WX2 424 aa7.74□□□□□ -1.17
CDCA3-209ENST00000544610 C1orf53Q5VUE5 145 aa7.74□□□□□ -1.17
CDCA3-209ENST00000544610 SLC39A5Q6ZMH5 540 aa7.74□□□□□ -1.17
CDCA3-209ENST00000544610 ZNF589Q86UQ0 364 aaPredicted RBP7.74□□□□□ -1.17
CDCA3-209ENST00000544610 SIAH1Q8IUQ4 282 aa7.74□□□□□ -1.17
CDCA3-209ENST00000544610 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.74□□□□□ -1.17
CDCA3-209ENST00000544610 CHMP4CQ96CF2 233 aa7.74□□□□□ -1.17
CDCA3-209ENST00000544610 ATG4CQ96DT6 458 aa7.74□□□□□ -1.17
CDCA3-209ENST00000544610 MAML3Q96JK9 1138 aa7.74□□□□□ -1.17
CDCA3-209ENST00000544610 IL25Q9H293 177 aa7.74□□□□□ -1.17
CDCA3-209ENST00000544610 SH2D4AQ9H788 454 aa7.74□□□□□ -1.17
CDCA3-209ENST00000544610 VCPKMTQ9H867 229 aa7.74□□□□□ -1.17
CDCA3-209ENST00000544610 ARHGEF10LQ9HCE6 1279 aa7.74□□□□□ -1.17
CDCA3-209ENST00000544610 SLC5A4Q9NY91 659 aa7.74□□□□□ -1.17
CDCA3-209ENST00000544610 ATP11BQ9Y2G3 1177 aa7.74□□□□□ -1.17
CDCA3-209ENST00000544610 TMX2Q9Y320 296 aa7.74□□□□□ -1.17
CDCA3-209ENST00000544610 RBM8AQ9Y5S9 174 aaKnown RBP7.74□□□□□ -1.17
CDCA3-209ENST00000544610 WDR46O15213 610 aaKnown RBP7.73□□□□□ -1.17
CDCA3-209ENST00000544610 FGAP02671 866 aa7.73□□□□□ -1.17
CDCA3-209ENST00000544610 PDIA4P13667 645 aaKnown RBP7.73□□□□□ -1.17
CDCA3-209ENST00000544610 AKR1B1P15121 316 aa7.73□□□□□ -1.17
CDCA3-209ENST00000544610 BECN1Q14457 450 aa7.73□□□□□ -1.17
CDCA3-209ENST00000544610 TMEM132BQ14DG7 1078 aa7.73□□□□□ -1.17
CDCA3-209ENST00000544610 LRRC41Q15345 812 aa7.73□□□□□ -1.17
CDCA3-209ENST00000544610 SHHQ15465 462 aa7.73□□□□□ -1.17
CDCA3-209ENST00000544610 TRIM60Q495X7 471 aa7.73□□□□□ -1.17
CDCA3-209ENST00000544610 FAM47AQ5JRC9 791 aa7.73□□□□□ -1.17
CDCA3-209ENST00000544610 VARS2Q5ST30 1063 aaKnown RBP7.73□□□□□ -1.17
CDCA3-209ENST00000544610 C9orf50Q5SZB4 431 aa7.73□□□□□ -1.17
CDCA3-209ENST00000544610 ZNF697Q5TEC3 545 aa7.73□□□□□ -1.17
CDCA3-209ENST00000544610 ANO1Q5XXA6 986 aa7.73□□□□□ -1.17
CDCA3-209ENST00000544610 CREB3L3Q68CJ9 461 aa7.73□□□□□ -1.17
CDCA3-209ENST00000544610 NCAPG2Q86XI2 1143 aa7.73□□□□□ -1.17
CDCA3-209ENST00000544610 CLEC10AQ8IUN9 316 aa7.73□□□□□ -1.17
CDCA3-209ENST00000544610 SPICE1Q8N0Z3 855 aa7.73□□□□□ -1.17
CDCA3-209ENST00000544610 DYNLL2Q96FJ2 89 aa7.73□□□□□ -1.17
CDCA3-209ENST00000544610 FAM161BQ96MY7 647 aa7.73□□□□□ -1.17
CDCA3-209ENST00000544610 KIF2CQ99661 725 aa7.73□□□□□ -1.17
CDCA3-209ENST00000544610 COL25A1Q9BXS0 654 aaPredicted RBP7.73□□□□□ -1.17
CDCA3-209ENST00000544610 RNF41Q9H4P4 317 aaPredicted RBP7.73□□□□□ -1.17
CDCA3-209ENST00000544610 CNNM2Q9H8M5 875 aa7.73□□□□□ -1.17
CDCA3-209ENST00000544610 ARMT1Q9H993 441 aa7.73□□□□□ -1.17
CDCA3-209ENST00000544610 ZNF287Q9HBT7 754 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms